Xxan020276.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- -
- Assembly
- GCA_963575645.1
- Location
- OY754474.1:3588940-3592911[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-11 8.4e-09 35.5 0.0 2 39 369 407 368 411 0.90 2 4 4.2e-12 7.8e-10 38.8 0.1 1 39 422 460 422 463 0.95 3 4 9.5e-18 1.8e-15 56.9 0.0 1 45 477 522 477 522 0.97 4 4 5.6e-19 1e-16 60.8 0.0 1 44 529 573 529 574 0.96
Sequence Information
- Coding Sequence
- ATGTTGCAGATCAATTTAGACACTTCTTTACTAAAAACGGCCGACCAATTAAAAATCAAAGGACTGTGCGAAGTTTCCGACAATAGTACAATATGCAACAATAACACTGACAATTATCCGTTTGGTTTTCACCACGGTGCCGCTGAAATATTACCCTCAGCTACGCGTCGACTGTTCACAAACAAATACAAAAGACCATCTCTTCAATCAAACTTGCCAACGTCATCAAAAAAGTACAAATTAATACCGAACACGAGCAAGTACCGCATTTATAGCAACAATAGAGAACAATCGATCAACAATGACGAAGAGTTGAATAACGAAACAATTGATAAAACAGCCAAGTCGATAAATACAAGTGAAGAGAACGAAGACGACGATGTTGACAAGAACGCAACAATGCCGGTGGTGATTTTACAAGAAGACCAACAGTCTGGTAGTACGGAGGACACGAAAGGTTGCGTATTTGGCGGACGTGACGCCACGGGAACTTTTAACGGTCAGAGGTGCGATAGAGACGGTGTTATATCGCCGGCTCTCAGCGATAACAGCGTTCAGCAGCCTTTGAATATGACTGGCCATGGATTGATACCGTCTCAGCATGTAGTCGTAGGCGACGTCGGTGAAGTAGAACTTCCTCCGGAACCACCAGCCCCTGCTGCGACCCCAGTTCGACCTTCAGACATCTTACAATGCGAACCATCTCATTGTACGACTCACCACGATTTGTCAGAGACGAGTTCAAGTCACGGCGATGTGAAAGTAAAATTTGAAACATTACGTTCAGTTGACGCTAACGATATCGACAGTAGACTATCTGGGGCCGGAGATAATCGCGCTGGTAGTTCTATGGGAGGCGGATCAATCGATGGTGACGATTTATCCCAACATTCACATCTTGGAAGCAGCACATCGCAACAAATGCATCATACAATGATGATAACGCCCGAACTTCTCGGACTTATTCCGAGCTCATCGCATACTGATTTGAATTCCGAACAAGGGCTAAAAACCAATGGTCATTCGATGCATGGTCATATATCAAACGGCGGAGGACATGGTAGTCATACGGGTACAGGAGGCGGAGGGCCAAAAACTTGGAGTCAGGAAGATATGGAACTTGCACTGGATGCATTGAGAAATCATAACATGAGTCTAACAAAGGCATCTGCCACGTATGGAATACCGTCAACAACACTTTGGCAGCGAGCTCATAGACTGGGAATAGACACCCCTAAAAAGGAAGGTCCAACAAAATCTTGGACAGAAGATAGTTTGAATTCAGCTTTGGAAGCTTTACGAACTGGCACAATATCGGCTAATAAAGCCAGTAAAGCGTATGGAATACCGAGCAGTACCTTATATAAGATAGCTCGTCGTGAAGGTATCAGATTAGCAGCACCGTTCAATGCAGCTCCAACAACTTGGTCGCCGGAAGATTTAGAAAGAGCCCTGGAATCAATCCGTTCTGGTCAAACGTCTGTTCAGAGAGCCTCCACTGAATTCGGAATTCCCACCGGAACATTGTACGGACGCTGTAAACGAGAAGGCATTGAGTTATCCCGATCAAATCCAACACCTTGGTCGGAAGATGCCATGGGGGAAGCATTAGAAGCAGTCAGAGTTGGTCAGATGTCGATAAATCAGGCCGCAATCCATTATAATCTTCCGTATTCATCACTGTACGGTCGTTTCAAGCGCGGCAAATACGAAACAGAACCCGTTCAACAGCACCAACAATCATCGAACGACGCAAACAGTCAACAGCAGCTTCAAATCAGTATGGGCGGTGACAGTTCCAGTCAAGATCACAACATGATGGTTGCCTATCATCATCAATCGCCACCGAACAACGGTCCCCAGCAAGCTGAGCAGCAATATCACCAATATCATGATATTAGCTGA
- Protein Sequence
- MLQINLDTSLLKTADQLKIKGLCEVSDNSTICNNNTDNYPFGFHHGAAEILPSATRRLFTNKYKRPSLQSNLPTSSKKYKLIPNTSKYRIYSNNREQSINNDEELNNETIDKTAKSINTSEENEDDDVDKNATMPVVILQEDQQSGSTEDTKGCVFGGRDATGTFNGQRCDRDGVISPALSDNSVQQPLNMTGHGLIPSQHVVVGDVGEVELPPEPPAPAATPVRPSDILQCEPSHCTTHHDLSETSSSHGDVKVKFETLRSVDANDIDSRLSGAGDNRAGSSMGGGSIDGDDLSQHSHLGSSTSQQMHHTMMITPELLGLIPSSSHTDLNSEQGLKTNGHSMHGHISNGGGHGSHTGTGGGGPKTWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDSLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLERALESIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYETEPVQQHQQSSNDANSQQQLQISMGGDSSSQDHNMMVAYHHQSPPNNGPQQAEQQYHQYHDIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510380;
- 90% Identity
- iTF_01510380;
- 80% Identity
- -