Xxan001767.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- retn
- Assembly
- GCA_963575645.1
- Location
- OY754464.1:46089992-46101588[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-20 1.6e-16 61.0 0.0 17 89 4 74 1 74 0.94 2 2 0.12 3.5e+02 2.2 0.0 15 42 185 212 166 216 0.68
Sequence Information
- Coding Sequence
- atgatTTCAGGAAGTCCAATAAATCGTCTTCCAATAATGGCGAAGTCGGTGCTGGATTTATACGAATTGTACAATTTGGTTATCGCGCGAGGTGGTCTTGTAGACGTAATCAACAAAAAGCTGTGGCAAGAAATCATCAAAGGTCTCAAACTACCATCGTCGATCACTTCGGCGGCATTTACACTCCGGACTCAATATATGAAATATCTCTATCCGTACGAATGCGAAAAATGCAATTTAAGCAATCCAAACGAATTACAAGCGGCAATTGACGGAAACAGACGAGAAGGTCGGCGTAGTAGTTATGGAACTTACGATATGGTACAGCGTAGTCCCGTTTCATCAGCACAGATGTCACCGATGACTCTAATGTCACAACACCAAACAATACAATCAATGGCTAGCAAAATGATGCCTAACGGTGCTCATCATCCGAGTCATGCCCTTCCATTAGGTCAACCGCCGTCATTAGGCCCTATTCCAGGTATTGCACCGGAATTTGAAAGCCGGATGGCTgaatacattaaattatttaataattccgCTCGAAATGAGACTGGATCTCCTACAAATCCCTTTAATCCTATTGAAATGTCACGATTGACGCTTTGGAATTTATATAATCAAACTCAACAAGAACCTCAGAGAGAAGCCCTGAACTTATCTGATCCAACTCCACCAATTCAGTCACCACAACAAACGCAGCCAGCCGTGACTATAAAAAGAGAATTGCCCGATAGAGAAAATGTTCCACCGGCCAAGAGAGTGACCCAAGATGAAGAAATGAATCCTCCAGCGCCCGCGCCTGCCCATACCTCTAGTTCCCAAAGGACCAGTATTAAATTAACCAGTAGAGAAGATTCTCCAAACGGCGATAATTCGATGGTTGTAACGATGGACATCAATGGCACCATTTATCAAGGAGTATTATTTGCTCAGAGCTCCTCACAAAATGGTGCCCGAAGTTCTAGAATCACAACGTGA
- Protein Sequence
- MISGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLKLPSSITSAAFTLRTQYMKYLYPYECEKCNLSNPNELQAAIDGNRREGRRSSYGTYDMVQRSPVSSAQMSPMTLMSQHQTIQSMASKMMPNGAHHPSHALPLGQPPSLGPIPGIAPEFESRMAEYIKLFNNSARNETGSPTNPFNPIEMSRLTLWNLYNQTQQEPQREALNLSDPTPPIQSPQQTQPAVTIKRELPDRENVPPAKRVTQDEEMNPPAPAPAHTSSSQRTSIKLTSREDSPNGDNSMVVTMDINGTIYQGVLFAQSSSQNGARSSRITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510251;
- 90% Identity
- iTF_01510251;
- 80% Identity
- -