Xxan005890.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- Rel
- Assembly
- GCA_963575645.1
- Location
- OY754466.1:22451074-22467183[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-41 1.2e-37 130.0 0.1 1 169 84 266 84 266 0.93 2 3 0.65 5.6e+03 -2.3 0.2 102 146 513 553 510 569 0.66 3 3 1.3 1.1e+04 -3.3 0.0 44 62 735 753 728 766 0.80
Sequence Information
- Coding Sequence
- atgacagATATGATAAAGGCAATCAGTTCGGCTTTATGTTATACATCACctgataattttgatattaatccATTTGaggCGAATGACATCAATATGGACCATTTCGGTATTTTAAGTCCACCGGCAAGTGCAGTAGATTCAACTGAATCTAACAGTACAGCAACATCCCCGATGTCGACACAAGCTATGTCACCGGCGACAATGCATGGTGCCGTTTTCACAGTCATTTCGGACATCGAAAAACCAAAACTAGTTGTTATAGAACAACCAGTTGAGAAATTTCGCTTTCGATACAAATCGGAAATGATGGGAACCCATGGTAGTTTAACAGGACGCAATTCAGATAAATCAAGAAAATATACATATCCAACAGTCGAATTGCGAAATTACTTTTTCCCGGCTATTATTCGATGTACACTTTATACGGGGGATGAAGTTAACAAAACAATGCACGCTCATCGATTAGTAAGTTCGGATCGAGATGATCCTCATGATATCGATGTCAATTCTGAAAAAGGATACCGAGCAATTTTTGCTAATATGGGCATAATACACACAGCAAAGAAATTTGCTGCcgaagaattatttttaaaaaagaagagAATATATCTGGAGAAACATCAAAGAAGCACTCTTACCAGCAAAGAAAATTCCGAGctgaaaCGAGAAGCACTTGAAGAAACTTCCAGAATGAATTTGAACACAGCGTGTTTGTGTTTTGAAGGATTCACTAGAACTTCAGATGGTCATTTGCAGAGTATATGTGAACCTGTATTTTCAGAtcctattaataataaaaaaagtgCACTTACTggtgatttaaaaatatgtcgAATTGACAAAACAGTTGGCAGTGTCATCGGAGATGAAGAAGTTTTCATTTTAGTCGAAAAAGTCATTCGAAagaatataaaaattagattttttcaaatagatGACGAAGATACGCGTATTTGGCAAGCCGAAGGCACTTTTAGTGAATTGGATGTGCATCACCAGTATGCAATAGTTTTCAGAACGCCCCCTTATAGAGATCGTGAAATAGACGAACCTGTGGACGTTTTTATTGAACTGTATAGACCTTCGGATGGCGAATGCAGCGAACCGAGGCCTTTCAAATATAAACCAGCGCCTCGAATCGGCGAGAAACGTGCACGGCCTATGAGTTTTGACAGCGGCGATTTGCCAACGACTCTGCTTGATGTAAATCGATCACCGTCGAGGCTCTCTGTGTTTTCTTCCGGTGAATTGTCCACAGGAGCCCGCGCAGCTGAAGCGCTTGAACATTGCATTGACGAAATCGATTCCGATGAATTTCAAGCAATTTGGAATAACGCCGCTTTCGTACAGCAATATAAACAAACGTTTGAAAATGATATATCCGCCTTTGAAAATATGCCCCGCTACCAAATAGATAGCGGTGACTTAAGAACTGATGGAAATAAAGTTAATCCGATAATTTTACATGAAAAGGCGGAACATGAGATGGATTATACCGGAAGCAATGTTTCTCCAAAAAGACAAAGTACTGTGTCTAAAGCTACAGACATTGAAAAAACAATAGCGATAAAGGTTGCGAATGACATAAAACATCTGAATTTGAATACCGAAGACAAAGAACATCTGAACTTGACCTTGAAAAACCTTTTCCAAGTTAGAACAAATAATGATGATagcgCTCTTCACACGTCAATTATGCATAATTTAGAAGAACAGTTGAGAATCATATTAAAAGCGTTAAGTAAAATAGATGAAACCAATCGTTTACATCTAGTGAACAGTTGTAACAAGTCAGGACAAACGCCACTGCATGTGGCCGTAGTATTCGGCCGTAAAGACGTTATAAACGCCTTGCTTAGAATCGGTGCCGATCTAAGCATCAGTGATATTTGCAGTGACAGTGCTCTGCATTTGGCCGCCAAATATATGCCGGCGAAAAAAGCAGTTGAAATGGTAGAGGAACTGTTGCAGTGCCAAATCAAAATAGAACATGATATTGAAAACGACTGGGGTTTGACGCCATTACATTTAGCTGCTCAAGCGAACAACATCAAAGTGGTGAAAATGCTAATTAATTCTGGCGCAAATGTTCATCAAAAGTGTAAAAGTGATGGCAATACTATATTGCATATATCTGTAAACAATGGTAACATTGATTTGCTCAAGTATTTACTGAACGAAACTCAAATTAATGTGGACGAACAAAACTATAGCGGAAATACAGCACTGCACATAGCTGTCGTCCAACAGAATGCAGAAATGTGTAAATTACTTAAAACACATAATGCGGACCACACCATACCAAATTTTTCATCGGTTGAAATAAAAAGAGAATATGAAGATGACGAAGAAGAAGCTGGACGAGATGTTGGCTTGACGTCAATGGAATTCGCAACAAATAATAACGAGattttgaaaattctCAAGACTGAAAATAGTACATACAGTCCGGAAGCGGCTGCAATGGAAACGGATTCTGAAACAACATTCGACACTACCTGTAGAAAAGAACTTGCCTCGTTGCTGGACGAATCCGGTTTGTGGAAAAAATTGGTCCAACTTCTTGAGTACGAAGACCATATGACTGTTTTAAGCGTAGCTGAAAGTCctacaaaaatgttattaagCATTGCTGAGaTTAACACGATCAGTGTGTATGGCATCAGAAGTCTTCTTGAAATGCTGGACGTCAAGAAGGGAGTCGTTGCAATTGACGATATGCTCCAGAGACAATTTCACTCGCCAGAATGA
- Protein Sequence
- MTDMIKAISSALCYTSPDNFDINPFEANDINMDHFGILSPPASAVDSTESNSTATSPMSTQAMSPATMHGAVFTVISDIEKPKLVVIEQPVEKFRFRYKSEMMGTHGSLTGRNSDKSRKYTYPTVELRNYFFPAIIRCTLYTGDEVNKTMHAHRLVSSDRDDPHDIDVNSEKGYRAIFANMGIIHTAKKFAAEELFLKKKRIYLEKHQRSTLTSKENSELKREALEETSRMNLNTACLCFEGFTRTSDGHLQSICEPVFSDPINNKKSALTGDLKICRIDKTVGSVIGDEEVFILVEKVIRKNIKIRFFQIDDEDTRIWQAEGTFSELDVHHQYAIVFRTPPYRDREIDEPVDVFIELYRPSDGECSEPRPFKYKPAPRIGEKRARPMSFDSGDLPTTLLDVNRSPSRLSVFSSGELSTGARAAEALEHCIDEIDSDEFQAIWNNAAFVQQYKQTFENDISAFENMPRYQIDSGDLRTDGNKVNPIILHEKAEHEMDYTGSNVSPKRQSTVSKATDIEKTIAIKVANDIKHLNLNTEDKEHLNLTLKNLFQVRTNNDDSALHTSIMHNLEEQLRIILKALSKIDETNRLHLVNSCNKSGQTPLHVAVVFGRKDVINALLRIGADLSISDICSDSALHLAAKYMPAKKAVEMVEELLQCQIKIEHDIENDWGLTPLHLAAQANNIKVVKMLINSGANVHQKCKSDGNTILHISVNNGNIDLLKYLLNETQINVDEQNYSGNTALHIAVVQQNAEMCKLLKTHNADHTIPNFSSVEIKREYEDDEEEAGRDVGLTSMEFATNNNEILKILKTENSTYSPEAAAMETDSETTFDTTCRKELASLLDESGLWKKLVQLLEYEDHMTVLSVAESPTKMLLSIAEINTISVYGIRSLLEMLDVKKGVVAIDDMLQRQFHSPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510238;
- 90% Identity
- -
- 80% Identity
- -