Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: stc
Assembly: GCA_947086425.1
Location: OX352206.1:1862407-1872444[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 2.1e+04 -4.4 1.6 15 19 621 625 620 625 0.81

2 14 0.079 5.5e+02 0.9 1.4 2 10 652 660 652 660 0.92

3 14 6e-05 0.42 10.9 18.1 4 19 668 683 666 683 0.93

4 14 3.9e-05 0.27 11.5 12.3 1 18 719 736 713 737 0.91

5 14 1.5 1.1e+04 -3.2 0.3 8 11 742 745 741 745 0.86

6 14 0.00036 2.5 8.4 10.4 1 18 778 795 778 796 0.98

7 14 2.4e-06 0.017 15.4 10.7 1 19 837 859 837 859 0.88

8 14 3 2.1e+04 -5.4 2.2 6 10 889 893 889 893 0.94

9 14 0.018 1.3e+02 3.0 8.3 1 11 899 909 899 910 0.94

10 14 0.16 1.1e+03 -0.0 1.2 3 10 913 920 912 920 0.91

11 14 3.1e-09 2.1e-05 24.6 15.7 1 19 926 944 926 944 0.99

12 14 3 2.1e+04 -5.5 15.5 1 18 983 999 983 1000 0.85

13 14 6.1e-08 0.00042 20.5 14.0 1 17 1036 1054 1036 1060 0.83

14 14 0.00087 6 7.2 3.9 1 12 1066 1076 1066 1078 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	2.1e+04	-4.4	1.6	15	19	621	625	620	625	0.81
2	14	0.079	5.5e+02	0.9	1.4	2	10	652	660	652	660	0.92
3	14	6e-05	0.42	10.9	18.1	4	19	668	683	666	683	0.93
4	14	3.9e-05	0.27	11.5	12.3	1	18	719	736	713	737	0.91
5	14	1.5	1.1e+04	-3.2	0.3	8	11	742	745	741	745	0.86
6	14	0.00036	2.5	8.4	10.4	1	18	778	795	778	796	0.98
7	14	2.4e-06	0.017	15.4	10.7	1	19	837	859	837	859	0.88
8	14	3	2.1e+04	-5.4	2.2	6	10	889	893	889	893	0.94
9	14	0.018	1.3e+02	3.0	8.3	1	11	899	909	899	910	0.94
10	14	0.16	1.1e+03	-0.0	1.2	3	10	913	920	912	920	0.91
11	14	3.1e-09	2.1e-05	24.6	15.7	1	19	926	944	926	944	0.99
12	14	3	2.1e+04	-5.5	15.5	1	18	983	999	983	1000	0.85
13	14	6.1e-08	0.00042	20.5	14.0	1	17	1036	1054	1036	1060	0.83
14	14	0.00087	6	7.2	3.9	1	12	1066	1076	1066	1078	0.96

Sequence Information

Coding Sequence: ATGTCTCAATGGAACAACTCATACTCTTACAACAACCAATATCAACAAAGTCCGAACGGCTGGAATGGTGACCCTAATGGGCAATACGTGAATCAAGCCTATTACACCAGGCCAGATGCCAATGGACAATATGTGAGTTTTAATGAGTTCCTAACACAAATGCAAAACAGTAATGTAACTCCACAGACCAATCCTAATACTTTCAACAATGTTCAGTATGAAAACTATCCCCAAGGCCAATATAACTATCAAAATATGCCTTCATCATCTCAAACACAGCTCAACAATTACAACTATGCACCTTCAGGCATATCCAATGAAGCCATTAGTTATCCAGTGAACCCACAGAGCCAGTTCAGTGCCCCACCTGCAGAACCAACGTACACAAACAACATGCCCTTCAAATCTAACCTTACAGCAACTGCAGTTGAGTTTGTGCCAAAAGGTGCTATCCCTAAATCTTCCACTAATCAGAACATTCCAGATACTTCCAGTAACAGTGATGTGAACGAAAGTGGCAATGATACAAGGACTAACTATGGTAGCTCATCAGATCGCAATTGGAGACAGAGACCGTTGAGTTCACACCAAACCAATGATGTAAAAGATAATACAGAGTCCAATGAACAATCACAGGGTTACAATAAAAGTAAAGAGCATAACAGCCGAGCCCAAAGGAAAAATGAACCCAGTAAGCAAGAAAGTAAGCCCCAAGATGAAAATAATGCAGGAGAACCCATCTCTCACAGCGAATCAGTTAATAGAAATCAAGATTTAACCAATAAGAGTCAGGAGACAAATCAGTATGAGTCAAGTAGCCTGAACAGAGAACCACGTCAACGAAACCATGATTCAAATAATAGAAACCAAGAATCTCGACCAAACAATAAGGGTCAAGATGCAAGGTCAAATAAAAATCAGGATTCAAGACAAAGAAACTTTGATGATAGAAACCAAGAAACAAGGCAAAGAAGTTATGATGATAGAAACCAAGCACCCAGGCAAAGAAACTATGAATCCAATAGTAGAAACCGAGATCAGCAAAATTACGAATCAAATGGTCAAGACTCAAAGGAAAATGATTCGAATCGCTACGACTCACGTAACGACCGCAGAAACCAAAACAAGAATAATTCAAAAGCGAAAGGCAAAGATGACAATCGGACTTTCTATAACAGTGCTATTAGTAAAGATAGTCAGGATGTCCGAAGTGGGAGGGGGGAGAGCTCCAGAGATTATGCAAGGACTGAAGTATCCAGAGATGATTACAATAAAACAGAAAACAGAAGTGAAAGCTATACTAAAGGAGAGGGATATTCAAGGGCTGAAGGTCAAAGAGAAGGTTCCGGAAGAGGTCAAAGAAACTGGTCGGGTACGCAACGTCCCAGAGGTGACCGTCACCAAGATGATGAACAGTATGCCAATAATTACCGTAAAGATGACAGAGAAAAAGAGAGAGAGAGACCGGACAGAGTAGAAAGGGGATCCGATCGCAGCGATAGGGATAGAGGATATGACCGGAACGATAGAGACCGAGGATATGATAGGAATGATAGAGATCGAGGGTATGATAGGGACAGAGGATATGAGAAACTAGACAGAGAGAGAGCGCCTAAATCTAATGTGTCTAGTCCTGCAAGATTTAAGAATAAATATCAGACTGATTTAGCTAACAAAGAAATGACCCAACGGGAACGTCTCACAGACCAATTAGACAAGGGCACACTAGAGTGCCTGGTTTGCTGTGATCGAGTGAGACAGACTGACCCCGTGTGGTCCTGCTCTAACTGCTACCATGTACTGCATCTTAGGTGTATACGGAAATGGGCTATGAGTAGTGTAATTGAGGGCAAATGGCGTTGTCCAGCTTGCCAGAACACAAGCAAGAGTATACCTACCGAGTACCGTTGCATGTGCGGCGCGCTTCGCTCGCCGGAATACTTGCGAGGGAGCGGCGCTCACACTTGCGGCAAGGCTTGTCGTCGCGAACGTACCTGTCCTCACCCCTGCACCTTGCTGTGCCATCCTGGACCTTGCCCGCCTTGTCAGGCTACTATCAACAAACAATGCGGTTGCGGTGCAGAGACGCGCAGCATCATGTGCAGCAGCAAGCTGCCTCAGATCTGCGGGCGGGTGTGTGGCCGCACCCTCAACTGTACCGTGCACTCCTGCGAAAATCAATGCCATGAGGGCGATTGTGAGGATTGCGACAAGACTGTCACTCAAGTGTGCCACTGCCCCGCCGCTACGGAGCGCACGGTCCCCTGCGACGCCACATCAGGCGCGGTGTCGTCGTGGGCGTGCGGCGCGGCGTGCGGCCGCGTACTGGTGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCCGCGCATGCGCACTGCGGCCGGAGAGCGTGCTCGCCTGCCCCTGCGGGAAGATGCAATTAGACAAAGATGCTCGCAAAGCGTGCACTGACCCCATTCCTCTGTGCGGCAACATTTGCGCCAAGCCACTCACTTGCGGGCCCGTCGGAGATAAACATTTCTGCAAACTAGTGTGCCATGAAGGTGAATGCCCGGCTTGCCCCGACAACACACTACTACAATGTCGCTGCGGGCACTCGAGCCACGAGGTATCCTGCGTCTCGCTGCCAGAAATGATCAACAATGTCTTCTGTCAGAAGAAATGTAACAAGAAACTATCGTGCGGTCGTCACCGTTGCCGCACGACATGCTGCGCGGCCTCGTCCCATCGCTGCACAGTGACGTGCGCGCGCTCTCTGCCTTGCGGCATACATCGCTGCGAGGAGTTCTGCCATACGGGACACTGCCCGCCGTGCCCGCGCGTCAGTTTCGAGGAGCTCCGCTGTGAATGCGGCACTGCCGTCTTACTCCCCCCCGTAGCTTGCGGCGCCCGCGCGCCCGCTTGCTCACGGCCGTGCGTGCGGCCGCGACCGTGCGGCCATCCACCCCACCATACCTGCCACGCCGACGCCTGCCCGCCTTGCGTCGTGCTTACTACTAAACGGTGCTACGGCGCACACGAGGAGCGGAAGACGATACCGTGTTCACTAGAAGAGTTCTCGTGCGGTCTGCCGTGCGGCAAGCCCCTACCTTGCGGGAAACACACCTGCATCAAGACCTGCCATAAGGGACCTTGCGACACTGGCAAATGCACCCAGCCGTGTACAGAGAAGCGTCCCGCTTGCGGTCACGTTTGCAACGCCCCGTGCCACTCTTCGGCAGAAGGCGTTGGTGCCGCCTGCCCCAGCGGCGCCCCCTGCCGGCAGCTGGTGCGTGCCACCTGCCCCTGCGGACGACGCAAGGCCGAGCGCGCTTGTAGTGATAACGCACGGGATCTGGCTAAGATCATGAGTGCCTTAGCTGCAACGAAGATGCAAGAAGGCGGACCAATAGAGATCACCGAACAACGCCCCGCCAACATGTTGAAAACTCTAGAATGCGACGACGAGTGCAGAGTTGAAGCTCGCACTCGCCAGATGGCGCTGGCTCTGCAGATACGGAACCCCGACGTATCGGCCAAGTTAGCGCCGCGCTACAGCGAACATGTTCGAGCCACAGCCACTAGGGAACCGGCCTTCGCACAGCAAATACATGACAAACTCACCGAGCTTGTACAACTGGCTAAGAAGTCTAAACAGAAGACGCGCGCGCACTCGTTCCCGTCTATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTGTGTGAACATTTCGGCTGCGAGAGCGTGGCATACGACGCGGAGCCCAATAGAAACGTCGTCGCCACCGCTGATAAGGAGAAGTCATGGCTGCCTGCGATGAGTATATTGGAAGTATTGGGTCGCGAGGCCGGCAAGCGTCGCGTGCCCGGCCCCGTGCTGCGAGCCGCATCTTCCGTCGCCTCCAGTGTGCCCAGTAACACCAAGTAA
Protein Sequence: MSQWNNSYSYNNQYQQSPNGWNGDPNGQYVNQAYYTRPDANGQYVSFNEFLTQMQNSNVTPQTNPNTFNNVQYENYPQGQYNYQNMPSSSQTQLNNYNYAPSGISNEAISYPVNPQSQFSAPPAEPTYTNNMPFKSNLTATAVEFVPKGAIPKSSTNQNIPDTSSNSDVNESGNDTRTNYGSSSDRNWRQRPLSSHQTNDVKDNTESNEQSQGYNKSKEHNSRAQRKNEPSKQESKPQDENNAGEPISHSESVNRNQDLTNKSQETNQYESSSLNREPRQRNHDSNNRNQESRPNNKGQDARSNKNQDSRQRNFDDRNQETRQRSYDDRNQAPRQRNYESNSRNRDQQNYESNGQDSKENDSNRYDSRNDRRNQNKNNSKAKGKDDNRTFYNSAISKDSQDVRSGRGESSRDYARTEVSRDDYNKTENRSESYTKGEGYSRAEGQREGSGRGQRNWSGTQRPRGDRHQDDEQYANNYRKDDREKERERPDRVERGSDRSDRDRGYDRNDRDRGYDRNDRDRGYDRDRGYEKLDRERAPKSNVSSPARFKNKYQTDLANKEMTQRERLTDQLDKGTLECLVCCDRVRQTDPVWSCSNCYHVLHLRCIRKWAMSSVIEGKWRCPACQNTSKSIPTEYRCMCGALRSPEYLRGSGAHTCGKACRRERTCPHPCTLLCHPGPCPPCQATINKQCGCGAETRSIMCSSKLPQICGRVCGRTLNCTVHSCENQCHEGDCEDCDKTVTQVCHCPAATERTVPCDATSGAVSSWACGAACGRVLVCGAHVCRAPCHAPPCRACALRPESVLACPCGKMQLDKDARKACTDPIPLCGNICAKPLTCGPVGDKHFCKLVCHEGECPACPDNTLLQCRCGHSSHEVSCVSLPEMINNVFCQKKCNKKLSCGRHRCRTTCCAASSHRCTVTCARSLPCGIHRCEEFCHTGHCPPCPRVSFEELRCECGTAVLLPPVACGARAPACSRPCVRPRPCGHPPHHTCHADACPPCVVLTTKRCYGAHEERKTIPCSLEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPACGHVCNAPCHSSAEGVGAACPSGAPCRQLVRATCPCGRRKAERACSDNARDLAKIMSALAATKMQEGGPIEITEQRPANMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRATATREPAFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSILEVLGREAGKRRVPGPVLRAASSVASSVPSNTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267812;
90% Identity: -
80% Identity: -