Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: -
Assembly: GCA_947086425.1
Location: OX352195.1:8702431-8709437[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.6 91 4.0 0.4 1 23 54 77 54 77 0.95

2 20 0.29 16 6.4 2.6 1 23 84 107 84 107 0.97

3 20 3.7 2.1e+02 2.9 4.1 1 23 180 202 180 202 0.97

4 20 0.0019 0.11 13.3 1.0 2 23 208 229 207 229 0.97

5 20 2.3 1.3e+02 3.5 1.5 1 23 235 257 235 258 0.94

6 20 0.21 12 6.8 2.9 2 22 486 506 485 506 0.95

7 20 0.59 34 5.4 0.4 2 23 758 779 757 779 0.96

8 20 0.036 2.1 9.2 3.0 2 23 850 871 849 871 0.96

9 20 0.034 1.9 9.3 0.5 1 23 879 901 879 901 0.97

10 20 0.18 10 7.0 3.4 1 23 939 961 939 961 0.95

11 20 0.00026 0.015 15.9 4.0 1 23 970 992 970 992 0.99

12 20 0.28 16 6.4 2.2 1 23 1073 1095 1073 1095 0.98

13 20 0.015 0.85 10.4 1.2 1 23 1151 1173 1151 1173 0.95

14 20 0.046 2.6 8.9 0.3 2 23 1180 1201 1179 1201 0.97

15 20 0.001 0.058 14.1 0.6 1 23 1270 1292 1270 1292 0.96

16 20 0.017 0.96 10.3 0.9 1 23 1298 1320 1298 1320 0.95

17 20 0.0073 0.42 11.4 2.6 1 23 1409 1431 1409 1431 0.97

18 20 0.00018 0.01 16.4 1.4 1 23 1437 1459 1437 1459 0.99

19 20 0.86 49 4.9 2.0 1 23 1548 1570 1548 1570 0.96

20 20 0.018 1 10.2 2.2 1 23 1588 1610 1588 1610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.6	91	4.0	0.4	1	23	54	77	54	77	0.95
2	20	0.29	16	6.4	2.6	1	23	84	107	84	107	0.97
3	20	3.7	2.1e+02	2.9	4.1	1	23	180	202	180	202	0.97
4	20	0.0019	0.11	13.3	1.0	2	23	208	229	207	229	0.97
5	20	2.3	1.3e+02	3.5	1.5	1	23	235	257	235	258	0.94
6	20	0.21	12	6.8	2.9	2	22	486	506	485	506	0.95
7	20	0.59	34	5.4	0.4	2	23	758	779	757	779	0.96
8	20	0.036	2.1	9.2	3.0	2	23	850	871	849	871	0.96
9	20	0.034	1.9	9.3	0.5	1	23	879	901	879	901	0.97
10	20	0.18	10	7.0	3.4	1	23	939	961	939	961	0.95
11	20	0.00026	0.015	15.9	4.0	1	23	970	992	970	992	0.99
12	20	0.28	16	6.4	2.2	1	23	1073	1095	1073	1095	0.98
13	20	0.015	0.85	10.4	1.2	1	23	1151	1173	1151	1173	0.95
14	20	0.046	2.6	8.9	0.3	2	23	1180	1201	1179	1201	0.97
15	20	0.001	0.058	14.1	0.6	1	23	1270	1292	1270	1292	0.96
16	20	0.017	0.96	10.3	0.9	1	23	1298	1320	1298	1320	0.95
17	20	0.0073	0.42	11.4	2.6	1	23	1409	1431	1409	1431	0.97
18	20	0.00018	0.01	16.4	1.4	1	23	1437	1459	1437	1459	0.99
19	20	0.86	49	4.9	2.0	1	23	1548	1570	1548	1570	0.96
20	20	0.018	1	10.2	2.2	1	23	1588	1610	1588	1610	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGTGCAAGTCGGCGAGGTCACAACTGTCGCGCGTCCGTTCGAAGGTCGCTTCTCCGTGGACGTCTCTTCGGAGGCCTCCTCGGACGCGGCTGAGGAGTTCGAACTGCCGCAGTGCAAGATAAGAAGGAACTATAATTGCGCCAAGTGCACGTACAATACGCAGAACCCGCGCGCTTATCTTGTTCACACGCGAGACGTTCACTTCGGAAGATTTAAAATTTACGAGTGTCAATATTGCATTTATGCTTCGAGGCATCAACAGAAGCTCTTGAGACATACGAAGATGGTTCACGGGACGACGCCTTCGTCCTCGGCGTCCAGAGTGGAGATGGAGTCCGCCGTCAGCGAGAGCATGCCGGAGAACATGGAAGATCTACTGGAAGAGATCGAGGAGTGCGATGATTCTCAGATGGAAGTTGATGAAGAGCATCCCGAGCGACCGGATGACGCAGACGTGAGCGTGTCTAGAAGCACCGCATCCGGATTACCGAAGGGAAAAGGCAAGTTCTTCTCCTGCGACAAATGCAACTACGTCACCCACATAAAGGCGAGATTCACGAAGCACGTCAAGTATCACTCGATGCCTATGATCAAGTGTACGATGTGCGACTTCCGGACGCCGTACAAGTGGAACCTGGACCGGCACATGAAGAACCACGGTGGGAGCGGAAGCTTCGTGTGCTCCAAGTGTACGTTCACAGCGGATATCAAGCAGAGCCTGACGGTGCACGAGATGAATCACCACACGCCGCCCGTGGGCCAGTCGGCGGCGAGTCGCCGTCGCAACCGGGTGGGGGCCAGCGACCTGGCGGCCGTCGACGCGCTGCCCAAGGAGGAGGAAGGGAGCTGCGACTCGCGCTCATCCCATTCTGTCTCGGACATCATGGGTTTTCAAGATGCGGAGAGAGATATAGTAAGCTGCAACAGCGATTCCAATGATACTGTGACCCAGATAAGCCCAGAAGGCTACCAATCAATACAAGGCACGTCCGGTCAGCAGTCACCAAACTCAGGCAACGAAGACAGATTTCATAAGCAAAGCAAAAAAGCCCCAAGGCCTATCCCCCAACTCATTCCTCTCAACGCTTCAACTCCTAATACAAAGACATCAGGAGAACCACCAGCCAAGAAATTCAAAGAGGCAATTTCAGAATTCACAAGTAAGTTTGAAAACTTGCCCGGTGACATCACTCTTACTCCAGTTAACGCACCTAAAGAAAGTGTAGTGCGGAAGAAGAATGAGTCGTTCTTTGACAAGTTGAAAGAAAGACTGCTGACTGAAACTGGAGAAGAAGGCTCACTGAAGTGTAAAAGTTGCGGATTCGAGAGCAAGTGCCTGTCTGAACATTCCGTGCATGAGAAAAACTGCGCAGCTCAAGCTAGCCGCGTCACGATGAGCACGTCGCATTCCTCTATGGGCTCTACTCGCTGCCAAAACTGTAGACATCGCTGCAAATCCAGCGCAGATTTGTACGTACATATGCTCACTTGTGGCAAGAAAGAATCCACCCAAACTCCTGCAGAAAGGAAACCGGACAACACTGAAGCCTCCACCTCAAGCTGCGATAAAGAAGCAGAACCACACCCGATGGAAAATGTAGTATTCGTATGGAACAACATAAACCAAGACAGTAAATTTGAAAGACCTCTAGACATTAACATTAACGACGATTCAACGATGCCCGATTCGCAGAGAAATTACGACGCGGAAATCGTCGACGAGAACGAAGGCATGAATTTATCGCCGAACAGTTTGAGTCTTGGTAAAAACGTTTATAAATGCTCAGATTGCAAGTTCTGGGCTGCTACCGCTTCTAGATTCCATGTCCACATCGTGGGACATTTGAATAAGAAGCCATTTGAATGCTCTTTGTGCAAGTACAAGTCTAATTGGCGCTGGGATATTACGAAACATATTAAATTGAAGTCCGCACGAGACCCGGAGCATAATGAAGCTAAAGTTCTGATGACTGATGAGACTGGAAGGAGGAATTACAGCAAATATAACAAGTTTTTAGCTGTTCCGGTCGTGAATGAAAACGGAGAAACTGAATTCCACTATATTGACCAAAATACAACAGCCGATGCTACTATGGAGATGGACGATTCTCTAAATGATAACAATGAAATGATGAACACGTCTTATGAAATGCAGCCGCTTAATTTACACGCACAATTTGGTGATATAAAGTTTGGCGCTGAAAACACTAATTTGGATAAGAAACCGAAAAAAACTATGTGGAAATGCAAAAAGTGTAATTACAAAGATCCGTCGAAGGAAGCGTTGTTGGAGCACGTGAGGCAGCATTCGAGGGATGGCGACGAGTCCAAGAAGGTGGAAACACCAGACCCGGCTGATCTGGCGTACCGCTGCGGCCACTGCAACCAATTGTCCAACTGGAAACATGTCATACAGAGACATTGCCGCTTGAAGCACGATGGGATAATAAAAGTGATCACTACGGTGAAGCCCAAACCCGACCCGGTCGCGGCATCGAGCAATGAAACCTTCAACGATTACTGCACCAAATGTCCCTTCAAGACCAACGACAAGAAACATCTTATGGAACATCTTCAACAGCACCAACCCTCCTCCCAGTCTATTTTCAAGTGCTACTTCTGCCCATACTTCGTGAAGGACGAACAAGATCTAATCCAACATCTGTTGCTTCACGGCATAACAGACCCCGAAGACTACATCGCTAAAGCGATGGGCTGTCGCTCTCCGCTTCCCGATACGGTGACGAACGAAGCTGTGGCTTCAGGCAGCGGCTCCACCAAACGCCACAAGTGCCAAGAATGTCCGTACGAAACAAACAGCAAGTCCCAGTACATGTATCACGAACAATTCCATCGCACCACCTCCGCAGAAACCCCTTATAAATGCCCCGAGTGCAACTACAGCGTGTCTAAAAGACATCTACTCCACCAGCATCTGAGAGTTCACGGAATCTTTGCGAAGAAGAACGAAAGCGAAGCGGAGCTCGAAGCTTCAACCTCTAACCAAAAAGCCGATAAATCTGATAGCTTCAGCGAAGATATACCCTTCGTATGGGTCTCGGCGAGAAATGAATTCCACAAGATGTACAAATGTCGCTATTGTTCGTACGTCAATTCTCAAAAATGCAAGATACCAAATCATGAAAAGATACATTGTCTCGGATTTGAGAATAGCGAAGTGATAATATATAAGTGTTTAGAATGTAAATTTACGTGTGATAATGCCGGGAGACTGGCGGAACATTCCAAAAAGCATGGACTTCTGTACGGTCGCATCTACAGCACCGTCGAGGAGGACATTCCCGATGAAGATCAAATAACTAGACTCCGCAAAGTTATTGAACTTGAAAAGAGCGCTGCAAGCGAAGATGCCCAAACAGAAGACAACGCAGTATTTGACTCTAAGGAAATTAAAATACTGTACTTTTGTCAGAAATGTCCTGCAAGATATTTCACTGAAAGTGAATTAAAAGCACATGAAAAATTCCACGACTTATCGCATGCTAATAAATGTAAGCACTGCGAGTTCTCAGTTTCCGAGGAGGCAGATCTCGTCGCCCACCTGTCTGTGCATTCAGATGAGCACCACATAAGGTCAAACATGCTCAAATTCATTCACAACTCACATTCTCTTTACACAGAACCTAGACTGGAAGCTAATCGCAATTCAGAATCTTTGGACGTAAGTTGGTCTGTTGCAGTCAATTTTAAAACCAATGAAAATACAGAGCCTCAACATATTAAGAAAACTCCAGACACAAAACACACGCCCAAACAATACAGTTGCAAAGAATGTCCAGCTAAGTTCTTCAAAAGTTCAGCACTCACATACCACATGGGATTGCACGGTGGCGAAGGGGAGCATAAGTGTAAGAAATGCACCTACGCTGTCAAAAACATTGGCAATTTAGCTAAACACGAGATATTACACGAAAATGATAAGTCGGGAAATTGTGACTACGAATCGGGCGATGATTTAGATTTTAAAAATATTCCACTCTCTGGAACTGATCTGTTCCAAAGGAAGACTGAAGCTCAGAAAAGAGTATTGACTGATAAAGACAAATTGGTCAAACCAAACGATCATTTTCCGCCTGTGCTCCAAGCGGACCCTCAATTCGGATACCTGATGCACGGAAATCCAGAATTCATCTATCCAACTTACTTGAAAAACGGCCGTCAGAAGGAGAAACGATATAAATGCCACAAGTGCCCTTCAGCTTTTGAAAAACGTGAACAGTACAAAATACATTTATCGCTTCACGGCTCCAAACAGAGATACAAGTGCGAGTTATGCGACTACTCTGTTAAATATTATGCAAATTACGTTCAACACATGCGAAAGCACCAGATGAATGACGAAGCTCAAGCAGAAAGAATGAAAGGGAGCAACGGTGATCCTGAAAATCAAGATATTAAACAAGAGGAAAGCTCTGACAACATCAAACTTGCGATCAAGACGATGCCCAAAGGAACGCCGAAAACAGACTTTCAGCAATTCTCAATCAGAGATCAACAAACTCTGCGATTGTTACAACTTAGGAGATCTATGAATAACGGTGGTAAAGATGCGGCTGCGGCAGAAACATCGCCCGCGAAGGAACGTAAACTGCACATGTGTCTTCTCTGCCCATACACCAACCAGCGGCAAGACGCCTTGAGCAACCATTACAGAAGACACGACGAAACCGACACTCACGACCCTCAATGGCCCACCACAGTCCACGGCAGTCATAAATGCTCCTACTGCGATTTAGTGGTCGTACAATCACATATCCTAAGAGAACATATAAAAACTCATTTCAATTTCAACAAAATTCTTACGCCAGAATGTTTCGTAGCAAATGACGATGTTAGTTTTACGATATCAAAAGTGGACGAAGAGAGCGAACCAGTTGATCTCAAATTAGACGTGAAAGCTAAGATTTTACCGTGCAATGATGATAAGATATTTGTCAAAATCAAGACAGGTGAACTTGTAGTTGAATAA
Protein Sequence: MLQQMSSSLSVQVGEVTTVARPFEGRFSVDVSSEASSDAAEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQYCIYASRHQQKLLRHTKMVHGTTPSSSASRVEMESAVSESMPENMEDLLEEIEECDDSQMEVDEEHPERPDDADVSVSRSTASGLPKGKGKFFSCDKCNYVTHIKARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLAAVDALPKEEEGSCDSRSSHSVSDIMGFQDAERDIVSCNSDSNDTVTQISPEGYQSIQGTSGQQSPNSGNEDRFHKQSKKAPRPIPQLIPLNASTPNTKTSGEPPAKKFKEAISEFTSKFENLPGDITLTPVNAPKESVVRKKNESFFDKLKERLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVTMSTSHSSMGSTRCQNCRHRCKSSADLYVHMLTCGKKESTQTPAERKPDNTEASTSSCDKEAEPHPMENVVFVWNNINQDSKFERPLDININDDSTMPDSQRNYDAEIVDENEGMNLSPNSLSLGKNVYKCSDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVVNENGETEFHYIDQNTTADATMEMDDSLNDNNEMMNTSYEMQPLNLHAQFGDIKFGAENTNLDKKPKKTMWKCKKCNYKDPSKEALLEHVRQHSRDGDESKKVETPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVAASSNETFNDYCTKCPFKTNDKKHLMEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPDTVTNEAVASGSGSTKRHKCQECPYETNSKSQYMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFAKKNESEAELEASTSNQKADKSDSFSEDIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTCDNAGRLAEHSKKHGLLYGRIYSTVEEDIPDEDQITRLRKVIELEKSAASEDAQTEDNAVFDSKEIKILYFCQKCPARYFTESELKAHEKFHDLSHANKCKHCEFSVSEEADLVAHLSVHSDEHHIRSNMLKFIHNSHSLYTEPRLEANRNSESLDVSWSVAVNFKTNENTEPQHIKKTPDTKHTPKQYSCKECPAKFFKSSALTYHMGLHGGEGEHKCKKCTYAVKNIGNLAKHEILHENDKSGNCDYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGSNGDPENQDIKQEESSDNIKLAIKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMNNGGKDAAAAETSPAKERKLHMCLLCPYTNQRQDALSNHYRRHDETDTHDPQWPTTVHGSHKCSYCDLVVVQSHILREHIKTHFNFNKILTPECFVANDDVSFTISKVDEESEPVDLKLDVKAKILPCNDDKIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00662678;
80% Identity: -