Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: -
Assembly: GCA_947086425.1
Location: OX352198.1:1962639-1969656[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0064 0.37 11.6 2.4 1 23 198 221 198 221 0.93

2 31 0.0023 0.13 13.0 2.5 3 22 252 271 250 271 0.92

3 31 0.00015 0.0084 16.7 0.3 2 23 306 328 306 328 0.97

4 31 8 4.5e+02 1.8 0.4 3 20 347 364 345 366 0.89

5 31 0.0062 0.36 11.6 1.1 1 23 376 399 376 399 0.95

6 31 0.063 3.6 8.5 0.1 1 23 425 447 425 447 0.96

7 31 0.0019 0.11 13.3 1.0 2 23 498 519 497 519 0.97

8 31 0.00022 0.012 16.2 2.0 2 23 565 587 565 587 0.97

9 31 7.3e-05 0.0042 17.7 1.9 1 23 637 660 637 660 0.97

10 31 0.0003 0.017 15.7 0.1 1 23 715 737 715 737 0.97

11 31 0.0009 0.051 14.3 6.4 1 23 748 770 748 770 0.98

12 31 0.058 3.3 8.6 1.1 2 23 782 803 781 803 0.96

13 31 0.0046 0.26 12.0 0.9 1 23 813 835 813 835 0.98

14 31 0.84 48 4.9 4.1 1 23 864 886 864 886 0.92

15 31 0.0057 0.32 11.7 7.8 1 23 897 919 897 919 0.98

16 31 0.0025 0.14 12.9 1.3 1 23 927 949 927 949 0.96

17 31 0.00028 0.016 15.8 0.2 2 23 969 991 968 991 0.97

18 31 0.069 3.9 8.3 2.9 1 23 1009 1031 1009 1031 0.96

19 31 0.26 15 6.5 0.9 2 23 1072 1094 1071 1094 0.90

20 31 0.0021 0.12 13.1 0.2 2 23 1117 1138 1116 1138 0.95

21 31 0.32 18 6.2 0.3 2 20 1142 1160 1141 1162 0.92

22 31 0.14 7.7 7.4 1.6 2 23 1181 1203 1180 1203 0.96

23 31 0.02 1.1 10.0 0.6 2 23 1219 1240 1218 1240 0.94

24 31 0.078 4.5 8.2 3.7 5 23 1250 1268 1248 1268 0.94

25 31 0.0013 0.073 13.8 1.4 2 23 1279 1301 1278 1301 0.95

26 31 2.8 1.6e+02 3.3 6.9 2 23 1318 1336 1318 1336 0.93

27 31 3.9 2.3e+02 2.8 1.9 2 20 1340 1358 1339 1360 0.91

28 31 0.48 28 5.7 1.9 2 23 1408 1429 1407 1429 0.93

29 31 0.004 0.23 12.2 0.3 2 23 1440 1462 1439 1462 0.97

30 31 0.37 21 6.0 0.8 2 23 1478 1496 1477 1496 0.80

31 31 1.5 87 4.1 3.7 2 20 1500 1518 1499 1520 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0064	0.37	11.6	2.4	1	23	198	221	198	221	0.93
2	31	0.0023	0.13	13.0	2.5	3	22	252	271	250	271	0.92
3	31	0.00015	0.0084	16.7	0.3	2	23	306	328	306	328	0.97
4	31	8	4.5e+02	1.8	0.4	3	20	347	364	345	366	0.89
5	31	0.0062	0.36	11.6	1.1	1	23	376	399	376	399	0.95
6	31	0.063	3.6	8.5	0.1	1	23	425	447	425	447	0.96
7	31	0.0019	0.11	13.3	1.0	2	23	498	519	497	519	0.97
8	31	0.00022	0.012	16.2	2.0	2	23	565	587	565	587	0.97
9	31	7.3e-05	0.0042	17.7	1.9	1	23	637	660	637	660	0.97
10	31	0.0003	0.017	15.7	0.1	1	23	715	737	715	737	0.97
11	31	0.0009	0.051	14.3	6.4	1	23	748	770	748	770	0.98
12	31	0.058	3.3	8.6	1.1	2	23	782	803	781	803	0.96
13	31	0.0046	0.26	12.0	0.9	1	23	813	835	813	835	0.98
14	31	0.84	48	4.9	4.1	1	23	864	886	864	886	0.92
15	31	0.0057	0.32	11.7	7.8	1	23	897	919	897	919	0.98
16	31	0.0025	0.14	12.9	1.3	1	23	927	949	927	949	0.96
17	31	0.00028	0.016	15.8	0.2	2	23	969	991	968	991	0.97
18	31	0.069	3.9	8.3	2.9	1	23	1009	1031	1009	1031	0.96
19	31	0.26	15	6.5	0.9	2	23	1072	1094	1071	1094	0.90
20	31	0.0021	0.12	13.1	0.2	2	23	1117	1138	1116	1138	0.95
21	31	0.32	18	6.2	0.3	2	20	1142	1160	1141	1162	0.92
22	31	0.14	7.7	7.4	1.6	2	23	1181	1203	1180	1203	0.96
23	31	0.02	1.1	10.0	0.6	2	23	1219	1240	1218	1240	0.94
24	31	0.078	4.5	8.2	3.7	5	23	1250	1268	1248	1268	0.94
25	31	0.0013	0.073	13.8	1.4	2	23	1279	1301	1278	1301	0.95
26	31	2.8	1.6e+02	3.3	6.9	2	23	1318	1336	1318	1336	0.93
27	31	3.9	2.3e+02	2.8	1.9	2	20	1340	1358	1339	1360	0.91
28	31	0.48	28	5.7	1.9	2	23	1408	1429	1407	1429	0.93
29	31	0.004	0.23	12.2	0.3	2	23	1440	1462	1439	1462	0.97
30	31	0.37	21	6.0	0.8	2	23	1478	1496	1477	1496	0.80
31	31	1.5	87	4.1	3.7	2	20	1500	1518	1499	1520	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAACTCGGAAAATGCAGGCTCTGCCTCAAGCTCGGTGACTTCTACTCCATCTTCACAGTGGATAATGATGTCCAACTATCCGAGATGGTCATGGAATGTTCCCGGATAAAGGTTTATGATGGGGATGGATTACCTGATAAAGTGTGCTCCGAATGCATACAGAAATTAAGCAGCGCTTATATATTTAAGCAGCAATGTGAGAGGTCTGATCAGGAGTTGCGGCGGAACTATGTTCCACCACTTGGATTCAGTGTGAGTCCACCACCACCAATAAACCGACAAAGTAGTGACTCTGCATTCTCTACTCATACTGAAAGCTCAAATTTGAAGACCTCATTTACTGAAAACAAAGTAACACCTGTCAGTCGAAACAGAAAAAGGAGCATCGAAAGTGACAATGCCTCTGTCGGCAGTCAGTCTCAGGACTACAGTAGACCCAGCAGCTCCAAACGCGTGGAAGAACTACGAAAGTCACAGAAAACAAAGCGGCCGCGGTACTCCGCCGACTCTGACTATGAAGACAACGGAGCTTCCAGCTTTGTAAATGAAACAGACTCGGATGAGCCGCTGCTAAAAAATGAACACGCCTGTCCACACTGCCCTAAGACCTTCAAATGGCTCAAGAGCTTGAGGATACACCTCACTGTGAAGCACTCGGTAAAAAAGACGGAGATGCAGCCCGACGTCATCGTCAACATTCCAATAAAAGCCATGGAAATTCCCAAGGACGAGGAACAGACGTGTTGCGAAAAATGTGGAAAGAAGTTCAAACTGAACATCATGCTGAAACGACATCAAGAAACTTGTCAAAAGTCACCCATGAAAACGGATAATAAATCACCGATGAAGGAGCTGGTCATAACATTGGAGCCGATAGACGCCGCGCCACAACGATCCAAGAAACCTACCTGTGAATACTGCACAGCCCAGTTCAAAACTATCGATAACTTGGAGAAACATTTAAGAGTAGTCCATGCAGCGACGCGGAGGAAAGATAAATCTGAAACCGAACCTAAAGGCCCGCTGATATGCTTATTCTGCACCAAAGACTTTGGAGATTACTATCTCTACAGCTCACATTTCAACAGTTGTCCGATGAAGGAGAGCCTAGCTTCCTACAAATGCCCAATGTGCTCGAAGGTTTGCATCCGGGTACAGAATTACGTGAGCCACGTAAAGGCTTCTCACTACCGATCTTCTTCGGGTAAGGTAGAGCCGATTTCGCCGAGCAAGCCCGGTCTGCAGAGTCAGGATGATCAGTCTTTTGAGTGCCGGATGTGCAGCCAGAAACTGGCAACACAAGCATTGTTGATAACGCACTTGGCCGCGCACATGACCGTTGAAGACGACGATGATGTAACTGTTGAAGATGATGACTTTGACTCGAGGGATGATACAGTACCTGATGACTCTATGTCGCTCCAATCTGCGCAAAGCTCTCAAGCCTCGCTGCCCTCGAAGGCCTCTCAGTCAGGGCCCGGCAAGTGTCGCTTCTGTGATAAAGAGTTCACGTACAGGAAGGCGCTTATCTCTCACGAATTGAAGCACACTGAAGAGAAAGTAACCATCAAAGCAGAACCCCCGGACAAAGCGCCTCAAGCAGACCTTCTCACAGAAACCGACAATCTGTTCGAAAAAGAATACGACTCCGATTCTAGTCAAGGCGATGGAGACGAAGACAATACGTGCGATATTTGCGAAAAGCAGTTCTCGTACAAGCGGCTTTTGATACAACATAAGCGCACGAAACATACGATGGTGGCGGGGATGAAGCGAGCGAAAATAAGCCTTAAGGACTGCTCCGTGAGGTGTTTAATCTGCGAAGAGGAGATGAAAGTCAGTGCTATTAATGAACACAATCAGAAACACATTTCTGTGAATATTCGGCCGAGGAATATTTACACTTGTGCAGAGTGCTCGCAGAAGTTCAAGAGTTGCAGTAACTTGGCTAACCACATCAAGCTGGTGCATCGGTTGAAGCAATCAGAAGTACCGAAGCAGTTTGCGGGCGTGGATATGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGACGAATCCCAGAGTCACAACGGCTATGGTGAGGTTCCGCTCGAAGCAGCTGCCACGGTCAACCTTAGCGGGTTCACCTGCCCCATCTGTGGGAAGAAGATGCCCACGCTCGTTTCACTCAAACGGCACGTGAACTGGCATTCCTTCGTGGGAAATAACTTGGAGTCGAAACATGAATGTTTCGTCTGTAAGGAGACCTTCAAATTCAAGGGTCACTTCAAAATGCACATGCGCGTCCACTACAAGGACACGAACCTGGACCCCTTGCTGCTGACGTGCTCCATCTGCCAGCGACGCAGCAAGCATCTCCGCGCCGCGCAGGCGCACATGAACTGGCACAAGCAGACGCGCTTCCAGACCAAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAGTACAGGCGCGTCTACCTCTCCCACATGGCCATACACTACAAGAAGGGCGAGAGCGGACAGAACACCATCGTCGGAGACAAGATGCCCACCAACCAGGACCCCGCCGCCTTCGACGGCACCTTCAGCTGCCAGCTCTGCGGCAAGGTCTGCGACTCGGAGAACTCGCTCAAGTGCCACACCAGCTGGCACAAGTCCAAGACTCTGCTGTATGGCGCGAGGCACGAGTGTCAGATGTGCCATCTACAGTTCACCAACAAGCGGCATCTGGAGCTCCACACGCGCTCGCACTACGAGGACCCCGACGGCGAGTTCAAGTGCACCATCTGCGGTAAGGGATTCATCGACGAGGAGTACCACAGGCGGCACGTCAAGGGGCACAACTTCGATCACCAATCTCACAAGAAGAGGATCGAGAATCTCAGAAAGGGGAAGGTCAAGTGTCCGATCTGCAACCGGTACTATCCGGATCTGGTGAAGCTGATCCGGCATCTGCGGCGCACGCACCCCGAGAGCAAGATGATCAAGGAGGACCCCGACGCGCCGCCGCCCAAGTACCACTCCTGCAAGCTCTGCGCCAAGACCTTCTACGACGAGAAACGATTGAAGAGCCACGAGGAGTCGCATCTCCGCAAACCCTGCTTCCTCAAGTGCAAGTTCTGCGGACACAAAACGATCTCCATGAAGGGACACCACCTCCACATCAAACAGAAACATATGACCAAGAAGTATGTGGAGAATCCTCTCAAGTGCACGCAGTGCGACGAGGTGTTCGTGTGGGGGTACGCGCTGCATCACCATCTGCGCGACGAGCACGGCATCAACGAGGACTGGATCGCCGAACGAACGGAGGCCACGCTCGAAGGACCGCTCAAAGACCTCCAGTGCTCTATATGCCTGAAGGTGCTTGCCAGTAAGGGTAACTTCGAACGACACATCGACTACCACAACACTCTACGATGCAACTACTGCTTCGAGTACTTCAGCACGCTTCGCTTCCTCGAAGGCCACCTCGCTTACAGCTGCGACAAGAAGAAGCTGATCGGAGACGCAGACCCGCATCCGAAACGGGTCAAATGCGAGATCTGCTACAAAGCCTTCAGCTTGCAGGTCAAGCTGGACTGCCATCTGAGGACTCAGCACGAGATCAAAGTGAACAGAGAACAGTCGGCCGGTAAACAGGAGCTCGTCTGCGACTACTGTTTCAAAGTGTTCGAGAACGAACACGCCCTGAGCGGGCACAAGATCTACCATCGCACCATCGGTTACTTCGGCTGCATTTACTGCCCGAAAAAATTCAACACTCAAACTGCTTACAGAAAGCATAAGAACCACCACTTTTCTCTGCATAATGTTGAAAATCCGACGAAGTGCGAGCATTGCGATGAAACCTTCGTGCAGTTCCGGGAGATGATCTACCACATGCGAGACGAGCACGGAGACGACAAGGAATGGATCATCATGCCGAAGGATTCCATCGAAGAGACCTGCACCATCTGCCACAAGACATTCTTCAACCTTCACAAGCACATGGATTATCACGAGGAGAACAAATGCAAGAAATGCAACGAGTACTTCTTCTCGACGGTGGATTACGACAACCACCTGTGCGCCATCGAGAGCGACGCCGAGGAGGCCCCCGGGGTCGTCAGCAACGGCTTGCCCTACGAGGAATGCAAGTTCTGTTTCAAACCCATCACCAAGAAGGACTCTAAGAAGAAACACGACATCCTTCACAGCACATCGGGAGCCATCTCCTGTCGGTTCTGCCATCTGAAGTTCAAGACGATCGACGCGTTTAATATACACGCGTTCTCTCACCGCAGCAGAAAATACAACAAGAAACCGATCAAATGCCGCGTGTGTAAAGAGCGTTTCGTGAAGTACGGTCCGTTCATAAAACACATGAGGGTCGTGCACAAATGCGCGAAGAAAACGCACTACCGCGCCCTCGTCAGGCCGGACCGCTGCGTCATCTGCGGCCAGTCCTTCCCCAACCTGCACAACCATTACCGCGCGCATCTCGCCAACCAATGCCAGTTCTGCCTCAAATACTTCACCTCCTCCAAGCTCTTCGCGAAGCACAAGTGCGACGTCATCGACGAGGATAGCTCCAAAGTCTTCACTTCAGATGAAAACTTGATGGCGCTCATCAACTCGTACGTTCCTAAGGATCTGAAGGATGATGAGAAGTACTACGGGTACACGGACGACGACGAGGATGTGGAGACCGAGCTGCCACCGGCGATCACTCAGGACCGGAAGGTCACAAACGGACCGACTGTGAAGAAGACCGTGAAGACGAGCCAAGAGGAGGAAATTGAGAGGAATCTGCACATGATGGTTCAATCGCCGATAATATCCGATGTGCTATCGTTGTACCAAAGTGAGGCGTTGCAGAGTACGATCGACGAGCCTAATGACGTGGTCAGTCTGTCCGATGACGATTCTATGGATATGAACGATGTTGCAGCTCCCATTGTTGTGATTGATGATGATGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNDVQLSEMVMECSRIKVYDGDGLPDKVCSECIQKLSSAYIFKQQCERSDQELRRNYVPPLGFSVSPPPPINRQSSDSAFSTHTESSNLKTSFTENKVTPVSRNRKRSIESDNASVGSQSQDYSRPSSSKRVEELRKSQKTKRPRYSADSDYEDNGASSFVNETDSDEPLLKNEHACPHCPKTFKWLKSLRIHLTVKHSVKKTEMQPDVIVNIPIKAMEIPKDEEQTCCEKCGKKFKLNIMLKRHQETCQKSPMKTDNKSPMKELVITLEPIDAAPQRSKKPTCEYCTAQFKTIDNLEKHLRVVHAATRRKDKSETEPKGPLICLFCTKDFGDYYLYSSHFNSCPMKESLASYKCPMCSKVCIRVQNYVSHVKASHYRSSSGKVEPISPSKPGLQSQDDQSFECRMCSQKLATQALLITHLAAHMTVEDDDDVTVEDDDFDSRDDTVPDDSMSLQSAQSSQASLPSKASQSGPGKCRFCDKEFTYRKALISHELKHTEEKVTIKAEPPDKAPQADLLTETDNLFEKEYDSDSSQGDGDEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSAINEHNQKHISVNIRPRNIYTCAECSQKFKSCSNLANHIKLVHRLKQSEVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGYGEVPLEAAATVNLSGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLESKHECFVCKETFKFKGHFKMHMRVHYKDTNLDPLLLTCSICQRRSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGDKMPTNQDPAAFDGTFSCQLCGKVCDSENSLKCHTSWHKSKTLLYGARHECQMCHLQFTNKRHLELHTRSHYEDPDGEFKCTICGKGFIDEEYHRRHVKGHNFDHQSHKKRIENLRKGKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPKYHSCKLCAKTFYDEKRLKSHEESHLRKPCFLKCKFCGHKTISMKGHHLHIKQKHMTKKYVENPLKCTQCDEVFVWGYALHHHLRDEHGINEDWIAERTEATLEGPLKDLQCSICLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAYSCDKKKLIGDADPHPKRVKCEICYKAFSLQVKLDCHLRTQHEIKVNREQSAGKQELVCDYCFKVFENEHALSGHKIYHRTIGYFGCIYCPKKFNTQTAYRKHKNHHFSLHNVENPTKCEHCDETFVQFREMIYHMRDEHGDDKEWIIMPKDSIEETCTICHKTFFNLHKHMDYHEENKCKKCNEYFFSTVDYDNHLCAIESDAEEAPGVVSNGLPYEECKFCFKPITKKDSKKKHDILHSTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYNKKPIKCRVCKERFVKYGPFIKHMRVVHKCAKKTHYRALVRPDRCVICGQSFPNLHNHYRAHLANQCQFCLKYFTSSKLFAKHKCDVIDEDSSKVFTSDENLMALINSYVPKDLKDDEKYYGYTDDDEDVETELPPAITQDRKVTNGPTVKKTVKTSQEEEIERNLHMMVQSPIISDVLSLYQSEALQSTIDEPNDVVSLSDDDSMDMNDVAAPIVVIDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_01528517;
80% Identity: -