Xspa004944.1
Basic Information
- Insect
- Xanthorhoe spadicearia
- Gene Symbol
- -
- Assembly
- GCA_947086425.1
- Location
- OX352194.1:12507524-12523599[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.017 30 5.0 0.0 17 43 159 182 155 183 0.85 2 10 0.0046 8 6.8 1.2 11 36 215 241 211 244 0.73 3 10 1.6 2.9e+03 -1.4 2.8 10 26 243 258 238 267 0.76 4 10 0.0023 4.1 7.7 1.6 10 38 311 334 305 339 0.76 5 10 2.1 3.7e+03 -1.8 2.6 14 43 342 368 333 369 0.66 6 10 0.079 1.4e+02 2.8 0.4 18 29 391 402 382 413 0.81 7 10 0.0058 10 6.5 0.8 15 38 417 437 407 441 0.83 8 10 0.0003 0.52 10.6 3.3 18 41 454 474 447 504 0.93 9 10 6.6e-05 0.11 12.7 3.6 15 40 507 529 499 532 0.84 10 10 0.0086 15 5.9 0.2 18 39 538 556 534 560 0.74
Sequence Information
- Coding Sequence
- ATGCCAAAAAGACCTAATCATAGCTCTCTATGTTTATCAAACCCTAATTTCCAGATCCGCAAAGGAGATGGACTGCCCACCACAATTTGTTGTGAATGCAAAGACAAGGCTGAGAAAGCTTTTGATTTCAAAAAGAAGTCTGAGGAGGCCTACAACTCCTTGAAAGGCTTCTACAAGGATGAAAAAAATGTATTTGAGTTTGATGAAGGTTCTGTACAGAAATCCATTGATCTCAAAACTGAAGATTCTCACTTTAGTGATCATGAAGAATATTCCGATGTTGACTTCAGTATGCCTCTCAAGAATGGTCCACCTGATATAAATAACATTGAATTCAAAGTGAAAGTAAAACATGAAGGTAATCGCGATTATTTTGAATGTAAAATGTGTTGTCTGATATTCCAAACACGGGCCAAGTATCAAGAACACAAGAAAAATAAATGTGTTAAAGTTGAATTTGAAGGCCAGAGTGGTGCGCACTGCCCTATTTGTGGTACAAGCTATGACGGCGCAAACAGCCTGTCCAATCATATGTGGCAGTTCCACGCTGATCTCATGGGACCCAAGAAGAGGGGACGACCAAAAAAGGCTATGACCTCGACAATATTGAGTAAATTATCTGAGAATGGCTTCTTTATAAAGACAGTGCAGGGAAAGAAAACAAAATGTGGTTTTTGCAAGGAACAACTTGATACCAAAGAGCATCTGAATTCACACATGTTTCAACACAGCGATGTCAAAGTCTTATGCTGTATTCTTTGCAAAAAAATGTATTTGAAAAAGAAGAAATTTGATGCGCACTCGTGTGTTGAGGATGCGAACAAGAGTGTCGCGAAAAGTGAAAGAAATGCTGGTGCCATTCAAGTGTGCGGCGCATGCAGTGCCGTATTTCTCTCAGAAGGTGATCTCATAAGCCATCATGATGCAGATCATCCGGAACTATCGTTACGATGCAACCATTGCTCCAAGGTATTTGCGTCGGTAAAAACAGCTGCCCGCCATAGGAGCATGTGTAAAGACATTGATAGAGTACACAGATGTTCGACTTGCGGCCTCAAGTTTGCCTACGAGATATCCCTCAACAAGCACATACTCAGATATCACCAGGGAGAGCGGGTATCGGTAGCGCACCAAGGAAAACAACCTAAACCCGCCTCTAATGTACAATATCAATGTGACACTTGCAATAAGATATTTCAACGAAAAGAGGCGCTTGCAAAGCACACCAAACTGCACATGCCGAACCAAAAGTTATTTGAATGTGACATTTGCCAAAGGAAATTCAACAGAAGCGATAATTTGCGTACCCACAAACGCATTCACGACGTGGACCGTCCAAAGCCGCCGACCAACAACCACCTGTGTCTGTACTGTGGCCGGGGCTTCTCAAACTCATCCAATCTCATCGTGCACATGCGCCGGCACACTGGCGAGAAACCATACAAGTGTGACTTTTGTGAGAAAGGCTTCCCTAGATCGTCTGATCTTATGGTTCACAGAAGATCTCATACCGGCGAGAAACCTTGCGTTTGTCGTCTTTGCGGCAAAGCATTCTCCCGCAGCAACAAGTTGTCACGTCACATGCGCGTGCACACCGGCCAGCGACCCTACAAGTGTACTTATTGCGACAAGGCATTCTCGCAGAGCAACGATCTAACGCTACATGTGCGCCGGCACACCGGAGATCGACCCTACATCTGCGAAGTCTGCGGCGATCGCTTCATTCAGGGTACTGCATTGCAGAATCATCGTCGAGCACATGGCCATTTTACCGTGGCACCTCCTACTGGCATTACGAACCAAGTGCAAGCTATCACAACGTACGCGGTAGCTAGCATCACTCATCATGATGACTCACATTTATCTAATACCATCACGTCTATATAG
- Protein Sequence
- MPKRPNHSSLCLSNPNFQIRKGDGLPTTICCECKDKAEKAFDFKKKSEEAYNSLKGFYKDEKNVFEFDEGSVQKSIDLKTEDSHFSDHEEYSDVDFSMPLKNGPPDINNIEFKVKVKHEGNRDYFECKMCCLIFQTRAKYQEHKKNKCVKVEFEGQSGAHCPICGTSYDGANSLSNHMWQFHADLMGPKKRGRPKKAMTSTILSKLSENGFFIKTVQGKKTKCGFCKEQLDTKEHLNSHMFQHSDVKVLCCILCKKMYLKKKKFDAHSCVEDANKSVAKSERNAGAIQVCGACSAVFLSEGDLISHHDADHPELSLRCNHCSKVFASVKTAARHRSMCKDIDRVHRCSTCGLKFAYEISLNKHILRYHQGERVSVAHQGKQPKPASNVQYQCDTCNKIFQRKEALAKHTKLHMPNQKLFECDICQRKFNRSDNLRTHKRIHDVDRPKPPTNNHLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLMVHRRSHTGEKPCVCRLCGKAFSRSNKLSRHMRVHTGQRPYKCTYCDKAFSQSNDLTLHVRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFTVAPPTGITNQVQAITTYAVASITHHDDSHLSNTITSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00811280;
- 90% Identity
- iTF_01529418;
- 80% Identity
- iTF_01529418;