Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_947086425.1
Location
OX352214.1:3227631-3254972[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-18 3e-15 56.6 0.0 2 89 17 101 16 101 0.94
2 2 5.1 1.2e+04 -3.0 0.5 11 34 1061 1083 1056 1087 0.76

Sequence Information

Coding Sequence
ATGGCAAAATTACAAATAAACACAAAATCCAGCAGCTATATGAGAGATAAAGAGGCTTTTCTGAAAGAGCTGCGACAGTTCAACGAGAGTAAGAATATAACATTGAAGCCGCCAATAGTGAATGGTATTGAGTTAGATTTATATCTATTTTACTCATTAGTACAGCAGAGAGGAGGTATTGGCAAGGTGAATCAAACAGATGTCTGGGAAACATTCCTTCGGCCACTGCGCTTGCCACATCCTTGTGTCAATGGATCTACTTTGCTGCGAAGGATATACGGAATTCATTTGGAAAAGTTTGAAAGAACAAAAGGACCTCCAGGTCGGGACGATGATCTGGAAATAGAAGAGGAGTTAACAAGACGGGGTCGCGGCGGAAACATGCCTCGTATTATGTTTAGTGGTGGTACATACATTTCAGCGTCCGGCGAAGCGCTACGTACGGCTCAAAGACCGACGGCGACGCACTCGGAGCGATTAGCCCTCTCGCTCTTATCGCCGATGCCGAACGAACAGGACTTCGCTGTGAATGTATGTACGGTGCTGGCAGCTGATCATTCGAACCGACTGCCTTTAGCGGCCACCCCGCATATACTGGACTTCTTGTTAGCGCACGCTGGAGTTTATAACCATCCGAGTCTCCGCGACACAATCGGGCGCTCCTACTTCGAAGCCCGAGGGCGCTATCCCGATGAGTTCTGGCGGCTCCGAGCCGGCGGCGGCGGTGCCAGGGAGCTCGCTGATGAAACCAAGTTCACTCAGAGCGTTGATGGGGAACCCGAGTTAATGGTGCAAGCTATGGCCGCCCACAACAATCTCACAGACTGTCTTACTATGGACGGACTTGAGGAGGAAATGGAGAAGATTACTGGGGACTTTGATATCCTAGAAGACTGGGTGACCGAGCCGTCTGAAGAGTCGCAACTCTTCGCGCCATCTCTCGCCGGCGGCGCGGACTGTGTTTACACACAGCGAGTGCTACAAATAGCGTCGATAGTGCGTTCACTGTCCTTCCACGAGGAGAATATACAGTATCTGGCTAAAAACACTACTCTGATCAGATTTCTGCTTCTCTGCTCCAACTGTTGGGTTGGAACGCTGCGTCAATCCGGGCTTGACACACTGGGAAATGTGTCTACGGAACTTATCATCAAGGAACCAGCAACTTGTCTGATCTCCCGCCATATCCTATCCACCATCCAATCAGCGCTCGTGTCTCCGGATCGCGCGCGTGTATTGGCTGCTTTAGAACTGCTGAACAAATTGGCGCAGAATGAGCATAATGAAGACGCACTGCTCAAGGCTTTGGAGTCTAAGGTGTATGCAGATGTGTGCGCACTACTAACCCTCCGTGATATAATGGTGCTAGTGTGTACTTTAGAGTGTGTGTACGCACTGACATCGCTGGGCGACCGCGCTAGCGAGGCCGTAGCGAGGGTACCCGGATTAGTACACACTTTGGTCTCCCTAGTTACTGTCGAAGCTCAAAGCTACGGTCCGAAGGCGTGTATCCTCATGCGTGTGGTAGAAACAGTGAGCGGTCCCGCGGCGCTCGCCGCTGTTCAGGATAGGGAACAAACGCAGACGCAGCCGATCATACTACAGCCACAGACTCCACAGAAGCAGTTGATTCAAGAGGCCCCCGCGTCCCCCGCGAACCCCGCCCCTGCGCCAAATACATTGCAACAGTCGCACTTGCAACAAAGGACTGTTCAGGAAAACGAACACTTCGCTCTCGCCTGGCTTCGTTCGTCTTACGAGCCGCTACCAGCGAACGACAACAGTACTTACGACGCTGGAGAGTTGTACAAACTGTATCTAACCTGCTGCACCAAGCTTAATAGGAAGGGGGTCATTGCACCCGCACATTTTCCGAGACTTGTCAGGACCGCATTTGGTGGTACCGTTGGCCCGAATCAAGTGACCTTAGCGTCAGGTGAAACGCAGCAAGTTTACGTCGGCATTCGATCCAGAAATCAGAATAGACCGACTACACAACCAGCTGGACCAGCTTCGCCCATTTTGAAGGCGCAACTGACGAGCAAACCCGTTGCTGGAGAAGTTAAAACACCCGTTTCGCAACCACAGAGCCAGCCTACCCCGCATATTGCATCAGCCTTAGAGTCTACCCCAACCAACACAACTCTCATAAAACATCTGTTGGCGCACAAAGTAAGCCCTGCGCAACCCCAGCTGCAAGTTGCACAAAGACAACAAAACCAACAACAAGGGCGCACAGGAAACACCGTTGTTGTACAGCCACCTACTCAGGCAATGGATTTGGATCCTGAGGACATGATCAAGTGCACTGCGATAACGCCGGGCGGCGTCGCTAGTATCAATCCAGCTTTAGACAAACCCGCGAATGAGGAGATTATTGCCGTTAAGGAAGAGCCGGTACAAATACAGATAGATGAACAGACACAATTGACTATCAAGTCAAACCAGAACAAGATGCTAGCCGATTTGCTCGAGAAGAAATCTAATCCGCCAGTGCAAGTGGTCCAAATGACGCCGCAGATGGGCGCGCCGACCATTCAGATCACTGAGACGGGGCAGATTGTGCAAGTCAAGGATCAGCCGATGATTCAGTTCAGTGAGGGTGGTCTTGTTTCTGGGGGGCAGTTCTTCCAGATTAAGAATGAGCAAGGTCAACTCATCCAAATAAAGAATGATCAAGGTCAAATCATTCAGCTCAAAAGCGATCAGCTCCAACAGCCGATACTATTCAAGAACGACCAAATGAACGTACAAATAAAACAAGAGCCCGTACCGCAGCTTATTCAAGGAGTTGTACAGATTAAGAGCGAGAAGGAAATAGTTGAGACAGTGACAACTGACCATTCTTATACCGAGCCGCCGGCTAAGAAGATTAAGATTGAGGAGAAGAGAGATTCGAATGCACCACAAGAGACGGCGTCGAAGACGGCAGCGAATCTTTACGCGGCGCTCGCAGCTTCGGCTTTAGAAGATGAAGAGGATTTGCTACCACAACCTTCAGTAAAGCAGGAAGAGCAGCCTGGAACGTCTGAAAACCAGTCAGTGATTATACAGGAGCCTATTATGCAGGTGCAACAACCAACAATGCAAGTTCAACAGCCGACTCTAATCCAACAACCAACATTACAAGTACAACAACCGAATTTGCAAGTACAAGGGAACTCTATCCAGATGCAGCAACAACAAATGCAACAGCAACAGATGCAAGTACAACAGCCAATGCTACAAGTTCAGCCGATGGATGTGCAGAATATTATCCAATCACAGTCCGGCCAGTTGATACTTCAAGATAAGTCAATGGGACAACAACAGCAATTTATACAGCAGCAACCAATGCAGATAATAGCTACACCTAGTAACGCACAAGGGGGCATAAGCTACATAGCTCAGAACATTCCGAGTAATATGATGCAGAAGACAATTATTATAGTACAAGGCGCGACCGGCGGCGGACCTCTTACGCTTACGGTGAACAACCCAGGCGGTTTGGACGAGGCGACGCTAAACAGCCTTATTGCGCAGGCAACAGAGGCGATAACCCAACAGCAAATAATACAGAACGCCGGTATGTTACAATCCGGGCAGCGAGTGATCGTGTCACAGCCGATGCTAGTCAGCTCATCCCAGCCGACGCAGTCTATTGCGGTCGTGAAGCAGGCTATATCACAGAACCCGCCTCAACTGACTCAAAGCCAGCAGCCCGTCATCACTACGCAGCCTCAGCCGCACAAGGCACAGATTGTCAGCTCAAGCCAGATACTCAATCAAGGACAACAACAGATCGTTGTAACACAGAAAAATCCGCCAGCGCTGATCAGCACATCAACGGGCAACCAGATCACCGGTCAACAGATCATAGTGCAGAACAATCAGCAGATCATAGTGAACTCGCCCAAAGCCGGGCACAAGTTCACGCCGATCCAGCCTCAAAGACAGACTGTACTGCAGTCTACTGATAGTAAAGCTGCGAAGACCCAGCCCATAGTACGGCAAGTGATAACGCGACAGCCCATCATGGTCGGCAACACTAAGATAGGCGATAAAGAAACCATCGTCAGTCAACCTGTTACTGAGAAACTTGCGCCATCACCGACGCCCCACACGCCACCATTAGATGATACACCTTGGATCTGCCATTGGCGTGGGTGTGGAAAATCATTTGAGAATGCAAACGAAGTATTCAACCACGCAGCTAGAGTGCATTGCCCGACGGGCGCGGGCGGCGAGGCGCCATGCATGTGGCTTGACTGCGACAGGGTTCCACGAAGAACATTCGCGCTACTCAACCATCTCACTGACAAGCATTGTTCAGCCAacgcattaaaagcggtgtacaattCGCGTCGTCACGCAGCCGCTGAAGCCGAAGCTAACAAGCCCGTGTCGCTCGGCTACCCGCCCAACGCGGCCCTCGCTGCCCTCAACAAACACGCAGCTGACATGTTCAATCCACGGGAACTTATGGATGAAAACGAAGGACCGGTGACTAAGAGCATACGATTGACTGCAGCGCTCATTCTGAGGAATATTGTCATCTACTCGAATACTGGCAGACGACAACTCCGTTCGTACGAGTCCCATCTATCCTCAATTGCGATCAGCAGCGTCGAAGCGTCGCGGACAATCGCTCAAGTTCTCTACGATATGAACAACATTTGA
Protein Sequence
MAKLQINTKSSSYMRDKEAFLKELRQFNESKNITLKPPIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLRLPHPCVNGSTLLRRIYGIHLEKFERTKGPPGRDDDLEIEEELTRRGRGGNMPRIMFSGGTYISASGEALRTAQRPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLAATPHILDFLLAHAGVYNHPSLRDTIGRSYFEARGRYPDEFWRLRAGGGGARELADETKFTQSVDGEPELMVQAMAAHNNLTDCLTMDGLEEEMEKITGDFDILEDWVTEPSEESQLFAPSLAGGADCVYTQRVLQIASIVRSLSFHEENIQYLAKNTTLIRFLLLCSNCWVGTLRQSGLDTLGNVSTELIIKEPATCLISRHILSTIQSALVSPDRARVLAALELLNKLAQNEHNEDALLKALESKVYADVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPKACILMRVVETVSGPAALAAVQDREQTQTQPIILQPQTPQKQLIQEAPASPANPAPAPNTLQQSHLQQRTVQENEHFALAWLRSSYEPLPANDNSTYDAGELYKLYLTCCTKLNRKGVIAPAHFPRLVRTAFGGTVGPNQVTLASGETQQVYVGIRSRNQNRPTTQPAGPASPILKAQLTSKPVAGEVKTPVSQPQSQPTPHIASALESTPTNTTLIKHLLAHKVSPAQPQLQVAQRQQNQQQGRTGNTVVVQPPTQAMDLDPEDMIKCTAITPGGVASINPALDKPANEEIIAVKEEPVQIQIDEQTQLTIKSNQNKMLADLLEKKSNPPVQVVQMTPQMGAPTIQITETGQIVQVKDQPMIQFSEGGLVSGGQFFQIKNEQGQLIQIKNDQGQIIQLKSDQLQQPILFKNDQMNVQIKQEPVPQLIQGVVQIKSEKEIVETVTTDHSYTEPPAKKIKIEEKRDSNAPQETASKTAANLYAALAASALEDEEDLLPQPSVKQEEQPGTSENQSVIIQEPIMQVQQPTMQVQQPTLIQQPTLQVQQPNLQVQGNSIQMQQQQMQQQQMQVQQPMLQVQPMDVQNIIQSQSGQLILQDKSMGQQQQFIQQQPMQIIATPSNAQGGISYIAQNIPSNMMQKTIIIVQGATGGGPLTLTVNNPGGLDEATLNSLIAQATEAITQQQIIQNAGMLQSGQRVIVSQPMLVSSSQPTQSIAVVKQAISQNPPQLTQSQQPVITTQPQPHKAQIVSSSQILNQGQQQIVVTQKNPPALISTSTGNQITGQQIIVQNNQQIIVNSPKAGHKFTPIQPQRQTVLQSTDSKAAKTQPIVRQVITRQPIMVGNTKIGDKETIVSQPVTEKLAPSPTPHTPPLDDTPWICHWRGCGKSFENANEVFNHAARVHCPTGAGGEAPCMWLDCDRVPRRTFALLNHLTDKHCSANALKAVYNSRRHAAAEAEANKPVSLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYESHLSSIAISSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01182451;
90% Identity
iTF_01528064;
80% Identity
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