Basic Information

Gene Symbol
Arid2
Assembly
GCA_963582015.1
Location
OY757051.1:5974989-6016660[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-19 1.9e-15 57.6 0.0 2 89 17 101 16 101 0.94
2 2 4.8 1.3e+04 -2.8 0.4 11 35 1074 1097 1069 1101 0.76

Sequence Information

Coding Sequence
ATGGCTAAATTACAAATAAACACAAAGTCCAGCAGCTATAACAGGGATAAAGAAGCTTTTATGAAAGAGCTTCGGCAGTTCAACGAGAGTAAAAACATAACATTGAAGCCACCTATTGTAAATGGTATTGAGTTGGATTTATATCTATTTTACTCATTAGTACAGCAGAGAGGAGGTATTGGCAAGgtgaATCAAACAGATGTCTGGGAAACATTCCTACGGCCACTGCGCCTGCCACATCCTTGTGTCAATGGATCTACTTTGCTGCGAAGAATATATGGAATTCATTTGGAAAAGTTCGAGCGTACAAAAGGACCCCCCGGCCGAGATGATGATCTTGAAATAGAAGAGGAGTTAACAAGACGCGGCCGCGGCGGAAACATGCCTCGAATTATGTTTAGTGGTGGTACATACATTTCAGCGTCCGGCGAAGCGTTACGTACGGCTCAAAAACCGACTGCGACGCATTCGGAGCGATTAGCCCTCTCCCTCCTTTCGCCGATGCCCAACGAGCAAGACTTTGCTGTGAATGTGTGTACGGTGCTAGCCGCTGATCATTCCAACCGACTGCCTTTAGCGGCGACTCCTCATATACTGGACTTCTTGTTAGCGCATGCTGGAGTTTATAACCATCCGAGCCTTCGCGACACAATCGGCCGTTCCTACCACGAAGCCCGAGGCCGCTACCCCGATGAGTTCTGGCGGCTCCGAGCCGGCGGGGGCGGTGCTAGGGAACTCGCTGATGAAACCAAGTTCACTCAGAGCGTTGATGGAGAACCTGAGTTGATGGTGCAAGCCATGGCCGCGCATAACAATCTTACTGACTGTCTTACTATGGACGGACTTGAGGAGGAAATGGAGAAGATTGCTGGGGACTTTGATATCTTAGAAGACTGGGTAACTGAGCCGTCAGAGGAGTCCCAGCTCTTCGCCCCGTCGCTGGCCGGCGGCTCCAACTGCGTGTACACACAGCGCGTGCTTCAAATAGCGTCCATAGTGCGCTCTCTGTCCTTCCACGAGGAGAATATACAGTATCTGGCTAAAAACACCACTCTTATCAGATTTCTGCTTCTCTGCGCCAACTGTTGGGTTGGCACGCTGCGTCAGTCTGGGCTTGACACTCTGGGAAATGTGTCTACAGAACTGATCATCAAGGAGCCAGCAACATGTCTGATCTCCCGGCATATCCTGTCCACCATCCAATCAGCTCTCGTGTCTCCGGACCGCGCGCGTGTGTTGGCAGCTTTAGAATTACTGAACAAACTGGCGCAAAACGAGCTCAATGAGGACGCTCTGCTTAAGGCTTTGGAATCTAAGGTGTATGCTGATGTGTGCGCACTGTTAACCCTCCGCGACATAATGGTGCTAGTGTGCACTCTGGAGTGTGTGTACGCACTAACATCGCTGGGCGACCGCGCTAGCGAGGCCGTAGCGAGGGTGCCTGGGCTGGTCCACACTCTGGTGTCTCTCGTCACAGTTGAGGCGCAAAGCTACGGTCCGAAGGCGTGTATCCTCATGCGAGTGGTTGAAACTGTGAGCGGGCCCGCGGCGCTCGCGGCGGTGCAGGACAGGGAACAGCCGCCGCCGATTATACTGCAGCCCCAGACCCCGCAGAAGCAGTTGATACAGGAGGCCCCCGCCtcccccgccgcgcccgcccccgcgccGGCCAATACATTGCAACAGTCGCATCTGCAGCAGAGGACTGTTCAGGAGAATGAGCACTTTGCGCTCGCCTGGCTTCGTTCGTCGTACGAGCCGCTGCCGGCCGCCGACAACAGTACCTACGACGCGGGAGAGTTGTACAAGCTGTACCTCACGTGTTGCACCAAACTTAATAGAAAGGGGGTCATTGCACCCGCACACTTTCCGAGACTTGTCAGAACCGTGTTTGGTGGGACAGTTGGTCCGAATCAAGTTACTTTAGCGTCTGGCGAAACGCAGCAAGTGTACGTCGGCATTCGCTCCAGAAATCAGAATCGACCCACTACACAACCAGCTGGACCTGCTTCGCCCATTCTAAAGGCGCAACTGACGAGCAAACCCGTTGCTGGAGATGTGAAAACACCCGTTTCTCAACCACAGAGCCAGCCATCGACCCCGCATATCGCTTCAGCTTTAGAGTCGACCCCGACCAATACAACGCTCATCAAACATCTGTTGGCGCACAAAGTAAGCCCTGCGCAACCCCAGCTGCAAGTTGCACAAAGACAACAAAATCAGCAGCAAGGACGCACAGCAAACACGGTCGTTGTACAGCCACCTACGcagGCAATGGATTTGGATCCCGAGGACATGATCAAGTGCACTGCCATTACACCGGGCGGTGTGGCTAGTATCAATCCGGCTTTAGATAAAcCCGCGAATGAGGAGATTCTTGGAAGAAGAAATGATTTGtggcttattttaatttttacagcCGTTAAGGAAGAGCCTGTACAAATACAGATCGATGAACAGACACAATTGACTATCAAGTCCAACCAGAACAAAATGCTAGCCGATCTGCTTGAGAAGAAATCGAACCCGCCAGTGCAAGTGGTTCAAATGACGCCGCAGATGGGCGCGCCTACCATTCAGATCACGGAGACCGGACAGATCGTGCAAGTAAAGGATCAACCTATGATCCAGTTCAGTGAGGGAGGACTTGTGTCTGGGGGTCAATTCTTCCAGATTAAGAATGATCAAGGTCAACTCATCCAAATAAAGAATGATCAAGGTCAGATCATTCAGCTCAAAAGCGATCAGCTCCAACAGCCAATCCTGTTCAAAAACGATCAGATGAACGTTCAAATGAAGCAAGAGCCCGTACCTCAGCTGATTCAAGGAGTTGTTCAAATTAAGAACGAAAAGGAAATGGTTGAGACAGTGGCCACTGACCACTCTTATACCGAGCCACCGGCTAAGAAGGTTAAGATTGAGGAGAAGAGGGATTCGATTGCACCACAAGAGACGGCGTCGAAGACGGCAGCGAATCTGTACGCGGCACTCGCAGCTTCGGCCTTGGAAGATGAAGAGGATTTGCTACCACAGCCCCCAGTGAAACAGGAAGAACAGCCCGGAACTTCGGAAAACCAGCCAGTGATCATACAGGAGCCTATTATGCAGGTGCAACAACCAACAATGCAAGTTCAACAGCCTACTCTTATCCAACAACCAACATTACAAGTACAACAACCGACTTTGCAAGTACAGGGGAACTCCATCCAGATGCAGCAACAACAAATGCAGCAGCAACAGATGCAAGTCCAACAGCCAATGCTACAAGTTCAGCCGATGGATGTGCAGAATATCATCCAATCGCAGTCCGGCCAGCTGATACTTCAAGATAAGTCAATGGGGCAGCAACAGCAATTCATGCAGCAACAACCAATGCAGATTATAGCGACACCCAGTAACGCACAAGGAGGAATAAGCTACATAGCCCAGAATATTCCCAGTAATATGATGCAGAAGACTATTATTATAGTACAAGGTCCTACCGGCGGCGGACCTCTTACTCTTACGgtGAACAATCCGGGCGGTTTGGACGAGGCAACGCTAAACAGCCTTATTGCGCAGGCAACAGAGGCGATAACCCAACAGCAAATAATACAGAATGCCGGTATGTTGCAATCGGGCCAGCGGGTGATCGTGTCTCAGCCGATGCTAGTAAGCTCGTCGCAGCCCACGCAGTCTATAGCGGTCATCAAGCAGGCTATATCACAGAATCCTCCTCCACTGACTCAAAGCCAACAACCCGTCATCACCACGCAGCCTCAGCCTCACAAAGCACAGATTGTCAGTTCAGGCCAGATTCTCAATCAAGGACAACAACAGATCGTCGTTACCCAGAAGAATCCGCCAGCACTGATCAGCACATCAGCGGGCAGCCCGATCGCCGGTCAACAGATCATAGTACAGAACAGCCAGATGGTGGTGAACTCGCCCAAGCCCGCCCACAAGTTCACGCCCATCCAGCCGCAAAGGCAGACTGTACTGCAGTCTACTGATAGCAAAGCTGCGAAGACCCAGCCCATAGTACGGCAAGTGATCACCCGGCAGCCTATCATGGTCGGCAATACGAAGATAGGCGATAAAGAAACTATCGTCAGTCAACCTGTTACTGAGAAGCTTGCTCCATCACCAACGCCCCACACTCCGCCATTAGATGACACCCCTTGGATCTGCCATTGGCGAGGATGCGGGAAATCGTTTGAGAATGCAAACGAAGTGTTCAACCACGCAGCTAGAGTGCATTGTCCGACGGGCGCGGGCGGCGAGGCGCCGTGCATGTGGCTCGACTGCGACAGGGTTCCACGCAGGACCTTCGCGCTCCTCAACCATCTCACCGACAAGCACTGCTCAGCTAACGCATTGAAAGCCGTATACAACTCGCGTCGGCACGCGGCCGCGGAAGCCGAAGCGAACAAGCCCGTCTCTCTCGGCTACCCGCCCAACGCGGCCCTCGCTGCGCTCAACAAACACGCCGCGGACATGTTCAATCCAAGAGAACTTATGGATGAAAATGAAGGACCGGTGACGAAGAGTATACGATTGACTGCAGCGCTCATTCTGAGGAATATTGTCATCTACTCCAATACTGGTAGACGACAACTCCGCTCCTACGAGTCTCATCTATCCTCAATCGCTATCAGCAGCGTCGAAGCGTCGCGAACAATCGCTCAAGTGCTGTACGATATGAACAACATTTGA
Protein Sequence
MAKLQINTKSSSYNRDKEAFMKELRQFNESKNITLKPPIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLRLPHPCVNGSTLLRRIYGIHLEKFERTKGPPGRDDDLEIEEELTRRGRGGNMPRIMFSGGTYISASGEALRTAQKPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLAATPHILDFLLAHAGVYNHPSLRDTIGRSYHEARGRYPDEFWRLRAGGGGARELADETKFTQSVDGEPELMVQAMAAHNNLTDCLTMDGLEEEMEKIAGDFDILEDWVTEPSEESQLFAPSLAGGSNCVYTQRVLQIASIVRSLSFHEENIQYLAKNTTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKEPATCLISRHILSTIQSALVSPDRARVLAALELLNKLAQNELNEDALLKALESKVYADVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPKACILMRVVETVSGPAALAAVQDREQPPPIILQPQTPQKQLIQEAPASPAAPAPAPANTLQQSHLQQRTVQENEHFALAWLRSSYEPLPAADNSTYDAGELYKLYLTCCTKLNRKGVIAPAHFPRLVRTVFGGTVGPNQVTLASGETQQVYVGIRSRNQNRPTTQPAGPASPILKAQLTSKPVAGDVKTPVSQPQSQPSTPHIASALESTPTNTTLIKHLLAHKVSPAQPQLQVAQRQQNQQQGRTANTVVVQPPTQAMDLDPEDMIKCTAITPGGVASINPALDKPANEEILGRRNDLWLILIFTAVKEEPVQIQIDEQTQLTIKSNQNKMLADLLEKKSNPPVQVVQMTPQMGAPTIQITETGQIVQVKDQPMIQFSEGGLVSGGQFFQIKNDQGQLIQIKNDQGQIIQLKSDQLQQPILFKNDQMNVQMKQEPVPQLIQGVVQIKNEKEMVETVATDHSYTEPPAKKVKIEEKRDSIAPQETASKTAANLYAALAASALEDEEDLLPQPPVKQEEQPGTSENQPVIIQEPIMQVQQPTMQVQQPTLIQQPTLQVQQPTLQVQGNSIQMQQQQMQQQQMQVQQPMLQVQPMDVQNIIQSQSGQLILQDKSMGQQQQFMQQQPMQIIATPSNAQGGISYIAQNIPSNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLIAQATEAITQQQIIQNAGMLQSGQRVIVSQPMLVSSSQPTQSIAVIKQAISQNPPPLTQSQQPVITTQPQPHKAQIVSSGQILNQGQQQIVVTQKNPPALISTSAGSPIAGQQIIVQNSQMVVNSPKPAHKFTPIQPQRQTVLQSTDSKAAKTQPIVRQVITRQPIMVGNTKIGDKETIVSQPVTEKLAPSPTPHTPPLDDTPWICHWRGCGKSFENANEVFNHAARVHCPTGAGGEAPCMWLDCDRVPRRTFALLNHLTDKHCSANALKAVYNSRRHAAAEAEANKPVSLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYESHLSSIAISSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01182451;
90% Identity
iTF_01528981;
80% Identity
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