Xdes024362.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- egg
- Assembly
- GCA_963582015.1
- Location
- OY757059.1:2020824-2049350[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 1.5e+03 -0.5 0.0 34 48 191 215 179 217 0.76 2 2 2.4e-15 1.1e-11 44.7 0.0 4 75 772 836 769 838 0.90
Sequence Information
- Coding Sequence
- ATGCACAAGGAAAAGGCAAAAGTATGCCCTCCTGATAAGATCATCACCATTCTGGAGAAAGTGCTTGGATCACAAATAACTAcagGATATAAAGCGCAGGACACATCAGTGAAAGGCAATGTAAGAAACTATGTCGAAGTAGAGTGCTCGTCCGATTCTGATGATGTACAAGAAGTATCCAAGACCCCGGGGCTAGATACTGCGAGCTCTAAGGAGGTGACAGGTAGCGGTAGTTCGCTTGCCGTGCCTAAAACCCAGAACAAAatgCCCAAGATCAATACAGATGAAGTGTCGATCAAGACTGCCAGCGGGTCATCCGCCCCTGTTCTTCATATTCCAGAAACTACCaTTGATCCTAAACCAAGCACGAAACGAGATGAGATCTTTAACGTCGATTCTGATGACGAAGAAGCTGTGAAGGAAGATGACAAGAAAACAACCCCCAAGGAAAAAGTCACTGAAGAAAACAAAGCTCCGAAACAAGAATCACCTAAAACAGAGAAGAAATGCATAAATCCGTCTTGCACAAGCGAGACTCGAAACTACTACGTTGCGGATCGCAGCACCGCCGCCTACTACTCGCTCACTAGGCGGAGTGCGTTGGTTTGCGAGCCTTGCAGACGACGCGCCAGCGAGCGAAGCGAGGCCCTTGTAAACGGCATCAAGGATCTCCGTCCGCTCTTGGAGCTGGACATGAATGCCCCGTCTCAGCAGCTCGTCGAGATATCAGATTCAGATTCCGACGGGGAGGGGGGGGACGAAACGGACCGTATAGGGGAGGAGGGGGCGGGATTCTTGGAGGAGCATCTAGCGGATGTGATCAATGAAACTTGGAGGAAATACGAAATGGAGTCGCGACTGAAGAGTACCGAAACGCACCTCTTGAACGAGCTAGAACAATTGGAAGCTGATGTGAAAGAGATAGATGCAATGCTAGACGAATGCCAGAAGAAGACGGATGCTATCCGCTTCGACTTCTACAAAGACTATGAGACGAGGAGGAAAAATGTCGGCGCTATTGTTATACACGACACACCTTTTAGCTCTtatTCTCACATAGAAAAGGACGTCGAACAACTAGCAACAGCGCCACCTGGCAGTCGGTACCCGAAACGTCGCGCCGCGTCTATCGCCAATGACACGCCCGCTAAGAAACCTGCCATACCTCTGGGGTATACCCCGCTAGATGCTAACAAAGTGATGGATCCAGCTGAATCTAAAGCTGATGATGATAAAGAAGACATATCTGTCGTGAAACTGTCAGCCGAGTCGGCCCCCCCCGACCTCCCCCCCCCCGGGGAGATCGTCCGCCCCCCCCTGCGGGTCGGGATGACTATCTACGCCATGAGGAATGCTTTCGGCACATGGCTTAAAGGCAAGATCATGGATGTACAGCCCAAAGCCGCCGGGcAACAATACTCTCAATGTCGTGTTAAGTTCGAGCACAAAGTGAAGAATCCGTGCAAAGTGCTGGCGGGGCGATGCCTCGCCTACTCAGAGCCGAGCGCGGTCCGGATGACTATAGGTACCCGAGTGGTGGCCCTATTCAAAGATCCGCAGAACCCGGCGAGACGGGAGTCGTTTTATTCGGGGGTGATCGCGGAAATACCCAACCCTGTCAATAGTTACAGATACCTAGTGTTCTTCGACGACGGCTACGCTCAGTACGTCCACCACCAGCACACGAGGGTCGTCTGCGAGTCCAGCGCGCTGGTGTGGGAGGAGGTGCACCAGTTCATCCGCGAGTTCATATACAAGTACCTGCTCTCCTACCCGGAGCGGCCCATGGTGAGGCTGCACGCCGGGGAGAAGCTGAAGACGGAGTGGAACGgcAAATGGTGGGACTCAAAAGTGCTGAAAGTGGACGCATCCATCGCCTTGATAAACTTCGACGAGGACAACAGAACGGAGTGGATATACCGCGGGTCCACCAGGCTCGCGCCGCTATACCTGGAGCTGCAGGCGGCGCGCGCGGGGGAGGGGAAGGGGAGGTCAAGACTGCCTAGGAACAAGGCGCTTATACGGACAAACATGCCGTGCGTAGAATACACGCGGTCTGATGAGCAAGCGGCGTCGAGAGCCGCGGAAACACAACAGAATGAGgaGATGCGTCGTCAAAGAGCCGTCGCCAAGAAGTCGACGACACAGTCGACACCGCCGACTCTTGCGCCGACGACTAATTACGAAGGTGTTATAAGTCGTGTTGTGTATTATACTCCTAAAAATGCAGTGAAGCCATACAAGATGTCCGCTCACAATTGCACGGTCCACTGTCGCCGCTCCGACCTCCTCTCTATGAAGGATCTGCGCACTTACAATCCGCTGGCCAAGCCGCTGCTTAGCGGATGGGAAAGACAAACGGTTCGCTACAAAGGTCACCGTGAGGTAGTGTACCGCGCGCCGTGCGGTCGACGCCTGCGCAACATGTCCGAGCTACACAGGTACCTGCGCATCCTGCAGAGCGACATGTCCGTGGACCTGTTCGACTTCACGCCCGGCACACACTGCCTGGCAGAGTTCGTGCTGAGCAAGTGCAATGTTAGCAAGAAGGATTTGTCCCACGGCAAAGAGAATGTCCCAGTCCCGTGTGTGAACTACTACGACAACTCCCTCCCCGAGTTCTGTTCATACAACACTGAGCGCACGCCCACCGCTGGGGTCCCGCTCAATCTAGACCCGGAGTTTCTGTGCGGGTGCGACTGTACCGACGATTGTATGGATAAGACAAAATGTGCTTGTTGGAAGATGACGCTAGAGGGCGCTCGCACGATCGGTCTCGAAGGCCCCAACATCGGGTACGCGTACCGGCGGCTTCCCGAGCCCCTGCCGTCCGGGATATACGAGTGTAACTCtagGTGCAAGTGCAAGCAGACGTGTTTGAACAGGGTCGCACAGCATCCACTGCAGTTGAAGTTACAAGTATTTAAAACGATAAACCGTGGTTGGGGCATCCGTGCCCTTAACGACGTGCCTAAGGGATCGTTCCTCTGCGTGTACGCAGGGAATCTACTCACCGACGCCACGGCTAACTTGGATGGTCTGAACGAAGGAGACGAGTATCTGGCTGAGCTCGACTACATAGAGGTCGTGGAGGCCATGAAAGAGGGATACGAAGACGATATACCCGACAAGGACAAGGCATTGGACAAGGTCAGTCAACTCagccctttacatctttactag
- Protein Sequence
- MHKEKAKVCPPDKIITILEKVLGSQITTGYKAQDTSVKGNVRNYVEVECSSDSDDVQEVSKTPGLDTASSKEVTGSGSSLAVPKTQNKMPKINTDEVSIKTASGSSAPVLHIPETTIDPKPSTKRDEIFNVDSDDEEAVKEDDKKTTPKEKVTEENKAPKQESPKTEKKCINPSCTSETRNYYVADRSTAAYYSLTRRSALVCEPCRRRASERSEALVNGIKDLRPLLELDMNAPSQQLVEISDSDSDGEGGDETDRIGEEGAGFLEEHLADVINETWRKYEMESRLKSTETHLLNELEQLEADVKEIDAMLDECQKKTDAIRFDFYKDYETRRKNVGAIVIHDTPFSSYSHIEKDVEQLATAPPGSRYPKRRAASIANDTPAKKPAIPLGYTPLDANKVMDPAESKADDDKEDISVVKLSAESAPPDLPPPGEIVRPPLRVGMTIYAMRNAFGTWLKGKIMDVQPKAAGQQYSQCRVKFEHKVKNPCKVLAGRCLAYSEPSAVRMTIGTRVVALFKDPQNPARRESFYSGVIAEIPNPVNSYRYLVFFDDGYAQYVHHQHTRVVCESSALVWEEVHQFIREFIYKYLLSYPERPMVRLHAGEKLKTEWNGKWWDSKVLKVDASIALINFDEDNRTEWIYRGSTRLAPLYLELQAARAGEGKGRSRLPRNKALIRTNMPCVEYTRSDEQAASRAAETQQNEEMRRQRAVAKKSTTQSTPPTLAPTTNYEGVISRVVYYTPKNAVKPYKMSAHNCTVHCRRSDLLSMKDLRTYNPLAKPLLSGWERQTVRYKGHREVVYRAPCGRRLRNMSELHRYLRILQSDMSVDLFDFTPGTHCLAEFVLSKCNVSKKDLSHGKENVPVPCVNYYDNSLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCMDKTKCACWKMTLEGARTIGLEGPNIGYAYRRLPEPLPSGIYECNSRCKCKQTCLNRVAQHPLQLKLQVFKTINRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEAMKEGYEDDIPDKDKALDKVSQLSPLHLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -