Xdes020635.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- -
- Assembly
- GCA_963582015.1
- Location
- OY757051.1:5833715-5856019[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-10 2e-05 24.6 0.0 5 81 28 106 26 117 0.82
Sequence Information
- Coding Sequence
- ATGAGGTTAAGGTACGACAAGTGGGACCGGGACcggggcgggggcggcggcAGTGGCGGTGGCTCGGGCGCGTGGTCCAGCCGCGATCGCGAGCGCGAGCGCGAGCGGCAGGCGCGCGCGCATCAGATGTCGCACGCGCACGCCGCCGAGCCCGACGCCTCGTCTCTCTTCCCGGCGCCAGTTAGGGTGACAGGGCACCGCGACAAAGTCAGCCAGCAGATCCAGCACAAGCTCGGCGACTACTTGCTCGCGCAGACCTTCATCGACGACCCCAGCAAGTCGATCGGCATCTGCGCGGAACCACCAAGTCCTGCACCATGTATACTACGAATGAGAATGGACACGAAGGTCCGTTAG
- Protein Sequence
- MRLRYDKWDRDRGGGGGSGGGSGAWSSRDRERERERQARAHQMSHAHAAEPDASSLFPAPVRVTGHRDKVSQQIQHKLGDYLLAQTFIDDPSKSIGICAEPPSPAPCILRMRMDTKVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00318104; iTF_01509617; iTF_00662233;
- 90% Identity
- iTF_00662233;
- 80% Identity
- -