Xdes015338.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- -
- Assembly
- GCA_963582015.1
- Location
- OY757044.1:4962572-4964722[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 0.00015 22.0 0.0 17 43 1 27 1 29 0.94
Sequence Information
- Coding Sequence
- ATGGGAATAAGAGAAGCCTGTCGGGTTTACGGCGTACCGAAAACTACTGTCCATGATCGACTCTCAGGGAAAGTCTCTGCCAACAAAAAACCCAAAGTTGGCCCAGACCCAGTTTTAGGTCTCGAAGGCGAAGAAAAGGTTAAAAACTGGGTACTGGATATGGCTAGGTGTGGATTTCCTATCTATAAGAAAGATTTACTCGAGAGTGTATCTAAAATAATTCGAGATAGTGGAATCAAAAACCCTTTCAAGGATGGCATGCCTGGAGACACTTGGTACTATGCTTTTTTAAGGCGTCATCCTGATGTGAGTGTTCGTGAACCAGAGGGCATAAATAATGCTAGAGCAGCGGTCACTGAGACTCGTATTAGATGTTGGTTTAGTGATTTAAGGGAATACATCAAATCAATAGATGCATTGGATATATTTGAAGACCCTGATAGGATTTTTAACGGCGACGAGACGGGATTTTCGCTATGTCCAAAAAGCGGTAAAGTTTTGGGGCCTAAAGGTTACAAGAACCTctatatgattaaaaaaaataatgaaaaagaaaatataaccGTATTGGTGGTATTTACGGCAAGTGGTAAGGTTTGTCCTCCTTTAGTGGTATTTCCATATATTAGACCACCAAAGGCTCTCGTCGATAATATGCCAGAATCCTGGGTCCTCGGAAGATCAGAGAGTGGATGGATGAGAAGTGATGTGTTTTATGAATATGTCTGCAACAGTTTTAATACCTGGGTAACACAACAGGGCATCAAGAAACCTGTTATTCTTTTCATTGATGGGCATAAATCACACATGACTTTATCGCTGAGCGAATTCTGTGAAGAAAACGGAATCATTCTTTACGCCCTACCAGCAAATACTACACACATCCTACAGCCAGCTGATGTGAGTGTTTTTAGGCCACTAAAACAGGAATGGAAGAAAACTGTTAGAAACTGGCAAGCACAACATATAAACGAAActataactaaaataaacttttgcAAGATATTGAAAGAGACGTTAACAATTAACCTGGAAGATGCCATAAAGAACGGATTTCGAAAATGTGGATTATATCCTTTAAATGAAGATGCTGTGGATTACACGAAATGTGTTAAAGACACACTACAAAAAGTTCGTAATTCTAACCAGAACAAAAAAACGCCATCTGCCAAGGACTATGATACTGCCAAAAATGTAATAACTTACCTAAAAGAAAATTTATCAAAAGAAGGCATCGATTCGAACGTAATTATCCAAGAAATGGACAAAGCAAAAGCGAATTTCCTAGCAAATCGACGCTCGAAATCTACAACACCACGAAATTCTGCATCTTCACGAAATTCCAATAGCATACTTGTTGAAGAAATCGAAGTCCACACTGCGGTCACGCCAGAAAATCTAAGCTTTGAAGGACCACAACTACCTGATATCCCTTCAGATACCTTGACTGATGCAACGCTGACCACCAATGCAACCTGGCAACAATTGATAGCTGAagaaaatattgataatataaGTTTTCCTGAGGCTGGATCATACATATCGTTAAACAATATCTCAATTGTGCCATTTGAAGAGGTTGAAGTTTCTCAGAATTTTAATAGCCAACACAGTATTCCCTCACAACATGAAAATCAATGTGTTTCTTTCACGGTATCAGCCGATATACATGAAGAACCAATCCCAGTACTTCAAGAGATCACCCCAACCTGTAGTTTCGATGATGCTTTCGCGCGACATCTGCAATTTCCTCAACCCCCAGCACCAAAGGAGAAAAAAGGTCCTAAATTACCGAGCGCTATTTCTTCGAGTTCTTGGAGGGAGTATTACGAAAAGAAAGATGAAGAGAAGGAGAACCTTGCcaaagaaaaaaatagaaaacaaatgTTAAGAGCAGAGTTGAAGGAAAGAAAAGCAAATGAGAAGAAAAACAAGATACAGAGAAGAAAGAAAGTGAAAAAGAATAACTCCAAAAAGTTACAATGTAGCGAGTGCTATGATGATTTGATAAGCGATGTGGAAGATGACTTAGAAAAGAATATTGGATGTGACAAATGTGTACGTTGGTACCATTTAAAGTGtactatttttaaagatttgacTTACGTAGAAGCGGCGTCAAATGATTACACAtgtcagttttgtaaataa
- Protein Sequence
- MGIREACRVYGVPKTTVHDRLSGKVSANKKPKVGPDPVLGLEGEEKVKNWVLDMARCGFPIYKKDLLESVSKIIRDSGIKNPFKDGMPGDTWYYAFLRRHPDVSVREPEGINNARAAVTETRIRCWFSDLREYIKSIDALDIFEDPDRIFNGDETGFSLCPKSGKVLGPKGYKNLYMIKKNNEKENITVLVVFTASGKVCPPLVVFPYIRPPKALVDNMPESWVLGRSESGWMRSDVFYEYVCNSFNTWVTQQGIKKPVILFIDGHKSHMTLSLSEFCEENGIILYALPANTTHILQPADVSVFRPLKQEWKKTVRNWQAQHINETITKINFCKILKETLTINLEDAIKNGFRKCGLYPLNEDAVDYTKCVKDTLQKVRNSNQNKKTPSAKDYDTAKNVITYLKENLSKEGIDSNVIIQEMDKAKANFLANRRSKSTTPRNSASSRNSNSILVEEIEVHTAVTPENLSFEGPQLPDIPSDTLTDATLTTNATWQQLIAEENIDNISFPEAGSYISLNNISIVPFEEVEVSQNFNSQHSIPSQHENQCVSFTVSADIHEEPIPVLQEITPTCSFDDAFARHLQFPQPPAPKEKKGPKLPSAISSSSWREYYEKKDEEKENLAKEKNRKQMLRAELKERKANEKKNKIQRRKKVKKNNSKKLQCSECYDDLISDVEDDLEKNIGCDKCVRWYHLKCTIFKDLTYVEAASNDYTCQFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01528233; iTF_00662172; iTF_00737416; iTF_00737417; iTF_00686290; iTF_00686291; iTF_01219718; iTF_01219719; iTF_01219720; iTF_01219721; iTF_01428980; iTF_01428979; iTF_01428981; iTF_00632704; iTF_00632705; iTF_00632703; iTF_00632706;
- 90% Identity
- iTF_01528233;
- 80% Identity
- -