Etes014272.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382206.1:3899832-3902018[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.00012 21.9 0.0 17 43 1 27 1 29 0.94 2 2 5 2.5e+03 -1.5 0.0 27 43 86 103 86 104 0.90
Sequence Information
- Coding Sequence
- ATGGGTATAAGAGAAGCCTGTCGGGTTTATGGCGTACCGAAAACGACGGTCCATGATCGACTCTCAGGGAAAGTTTCTGCCAATAAAAAACCTAAAGTAGGCCCAGACCCAGTTTTAGGTCATGAAGGTGAGGAAAAACTTAAAAACTGGGTACTGGATATGGCTAGATGTGGATTTCCTATTTATAAGAAAGATCTACTTGAGAGCGTATCTAAAATAATTCGAGATAGTGGAATCAAAAATCCTTTCAAAGATGGCATACCCGGAGACACCTGGTATTACGCGTTTTTAAGGCGTCACCCTGATGTGAGTGTTCGTGAACCAGAGGGGATTAATAATGCCAGAGCAGCAGTCACTGAGACTCGTATAAAATGCTGGTTTAATGATTTGAGGGAATATATAAAATCCATAGATGCATTGGACATATTTGAAGACCCTGATAGGATTTTCAACGGTGACGAGACAGGATTTTCTCTGTGCCCAAAAAGCGGTAAAGTTTTGGGCCCTAAAGGTTACAAGAATCTCTATATGATTAAAAAAAATAATGAAAAAGAAAATATTACCGTACTGGTAGTATTTACGGCAAGTGGTAAGGTTTGTCCTCCTTTAGTGGTGTTTCCGTATGTAAGGCCACCCAAAGCTCTTGTCGATAGTATGCCAGAATCTTGGGTACTTGGAAGATCAGAGAGTGGATGGATGAGAAGTGATGTGTTCTATGAATATGTCTGCAATAATTTCAATACTTGGGTAACAGAACAGGGCATCAAGAAACCTGTTATTCTCTTCATTGACGGACATAAGTCTCATATGACCTTATCACTGAGCCAATTCTGTGAAGAAAATGGAATTATTCTGTATGCCCTACCAGCAAACACTACACACATTCTTCAGCCAGCTGATGTGAGTGTTTTTAAACCACTCAAGCAGGAGTGGAAGAAAACGATTAAGAATTGGCAGGCAGCCAATGTCAACCAAACCGTAACGAAATTAAATTTTTGCAAAATATTAAAGGAAACGTTGACAATGGACCTGGAAGATGCAATAATAAACGGATTCCGAAAATGTGGATTATATCCTTTGAATGAAGATGCTGTGGATTACACGAAATGTGTTAAAGACACTTTAAGGAAGGTTCGCAATTCTAGCAAAAACAAAAAGGAGCCATCTACGAAGGACTACGACACTGCAACGAATGTTGTAACGTTCCTGCAAGAAAGTTTATCAAAGCACAACATTGACACGAACATAATCTTTAGTGAAATAGATAAAGCTAAAGCGAGATTCCTTCTCAACCGCCGTTCCAAATCCAAAACGCCTCGAAATTCAGCATCGTCCAACCTGAGCAACAGTTTACTTAGTGAGGCAATTGCTGTTGATACCGCGGTCACACCAGAACATTTATGTTTCGAAGAGCCTCTTCTCACCTTGCCACAAGTTTCTGATATCCCTTCCTGTCAGAACTTAGATATCTTGACTGCAGATCTAACAACCGATGCATCGCTGCAACAATTAATAGCTGGAGAAAATATAAGTTTTCCTGAGGCTGGATCGTTTGTATCGCTGAACAATATCTCAGTTGTGCCTTTTGATGAAATCGAAATTTCTCAGCAATTAAATAGCCCGCTCAGTGATCCTTCTGAAACTGAAAATCAACGTCGTTCTTTCACAGTATCAGCCGATGTACATGAACAACCAATCCCTGTGCTTCAAGAGATCATTTCGACCTGTTCATTTGATGATGCTTTCGCGAGACACCTGCAATTTCCCGAACCCCCAGCGCCAAAAGAAAAAAACAAAGGTCCTAAATTGCCGAGCGCTATTTCTTCAAGCTCATGGAGAAAGTATTACGAAAAGAAAGATGAAGAGAAAGAAAACCTTGCTAAAGAGAAGAATCGGAGACAACTGTTAAGAGCCGAGGTAAAAGAAAGAAAAGCTAAAGAGAAGGCAAACAAAATACCTAGAAAGAAGAAAGCACTAAAGAAAAACACCTCAAAAAAATCAGCTTTACAATGTAGCCAATGCTGCGAAGATTTGATTAGTGATGTAGAGGAAGACTTAGAAAAAAATATCGGCTGTGACAAATGTGTACGTTGGTACCATCTAAAGTGTACTATTTTTAAAGATTTGGCTTATGTAGAAGCGGCGTCAAATGATTATACGTGTCAGTTGTGTGAAATTACCAAATAA
- Protein Sequence
- MGIREACRVYGVPKTTVHDRLSGKVSANKKPKVGPDPVLGHEGEEKLKNWVLDMARCGFPIYKKDLLESVSKIIRDSGIKNPFKDGIPGDTWYYAFLRRHPDVSVREPEGINNARAAVTETRIKCWFNDLREYIKSIDALDIFEDPDRIFNGDETGFSLCPKSGKVLGPKGYKNLYMIKKNNEKENITVLVVFTASGKVCPPLVVFPYVRPPKALVDSMPESWVLGRSESGWMRSDVFYEYVCNNFNTWVTEQGIKKPVILFIDGHKSHMTLSLSQFCEENGIILYALPANTTHILQPADVSVFKPLKQEWKKTIKNWQAANVNQTVTKLNFCKILKETLTMDLEDAIINGFRKCGLYPLNEDAVDYTKCVKDTLRKVRNSSKNKKEPSTKDYDTATNVVTFLQESLSKHNIDTNIIFSEIDKAKARFLLNRRSKSKTPRNSASSNLSNSLLSEAIAVDTAVTPEHLCFEEPLLTLPQVSDIPSCQNLDILTADLTTDASLQQLIAGENISFPEAGSFVSLNNISVVPFDEIEISQQLNSPLSDPSETENQRRSFTVSADVHEQPIPVLQEIISTCSFDDAFARHLQFPEPPAPKEKNKGPKLPSAISSSSWRKYYEKKDEEKENLAKEKNRRQLLRAEVKERKAKEKANKIPRKKKALKKNTSKKSALQCSQCCEDLISDVEEDLEKNIGCDKCVRWYHLKCTIFKDLAYVEAASNDYTCQLCEITK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01528234;
- 90% Identity
- iTF_00632703;
- 80% Identity
- -