Basic Information

Insect: Xanthia togata
Gene Symbol: Znf296
Assembly: GCA_963853775.1
Location: OY970790.1:13565966-13585593[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.089 13 8.1 0.6 1 21 159 179 159 180 0.95

2 13 0.00051 0.072 15.2 0.6 2 20 193 211 192 215 0.95

3 13 0.04 5.6 9.2 0.9 2 23 255 276 254 276 0.95

4 13 4.5 6.4e+02 2.7 0.5 2 23 353 375 352 375 0.89

5 13 0.011 1.6 10.9 0.3 1 20 380 399 380 401 0.92

6 13 4.2e-05 0.0059 18.6 0.8 1 23 409 432 409 432 0.98

7 13 2.9e-05 0.0041 19.1 2.2 1 23 453 475 453 475 0.98

8 13 3.9e-06 0.00055 21.8 3.8 1 23 482 504 482 504 0.99

9 13 1.4e-07 2e-05 26.3 2.3 3 23 518 538 516 538 0.96

10 13 3.3e-05 0.0047 18.9 3.2 1 23 544 566 544 566 0.99

11 13 2.9e-06 0.00041 22.2 2.6 2 23 573 594 572 594 0.96

12 13 1.7e-07 2.4e-05 26.1 1.4 1 23 600 622 600 622 0.99

13 13 0.0041 0.57 12.3 0.1 1 23 628 650 628 650 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.089	13	8.1	0.6	1	21	159	179	159	180	0.95
2	13	0.00051	0.072	15.2	0.6	2	20	193	211	192	215	0.95
3	13	0.04	5.6	9.2	0.9	2	23	255	276	254	276	0.95
4	13	4.5	6.4e+02	2.7	0.5	2	23	353	375	352	375	0.89
5	13	0.011	1.6	10.9	0.3	1	20	380	399	380	401	0.92
6	13	4.2e-05	0.0059	18.6	0.8	1	23	409	432	409	432	0.98
7	13	2.9e-05	0.0041	19.1	2.2	1	23	453	475	453	475	0.98
8	13	3.9e-06	0.00055	21.8	3.8	1	23	482	504	482	504	0.99
9	13	1.4e-07	2e-05	26.3	2.3	3	23	518	538	516	538	0.96
10	13	3.3e-05	0.0047	18.9	3.2	1	23	544	566	544	566	0.99
11	13	2.9e-06	0.00041	22.2	2.6	2	23	573	594	572	594	0.96
12	13	1.7e-07	2.4e-05	26.1	1.4	1	23	600	622	600	622	0.99
13	13	0.0041	0.57	12.3	0.1	1	23	628	650	628	650	0.97

Sequence Information

Coding Sequence: ATGGCCTCTATTCAGGAAtccgaaataaaaattgaaGAATTGTGTAGAACGTGTTTGTCTAAGGATAATGAATTATACTCGTTATTTGATATTCTTATAGGCTCAACAATCACGTTAGATTACATAGTAACATCAACTACTGGGATAaagATAAGCAAAAATGATGGTTTGCCTTCAACAATTTGCTGCGAGTGTAAAGAAAAAGCATCAAAGGCgtttgaatttaagaaaaaatcgGAAGAAGCTAATATGTCCCTTAGAgggatattaaaaaaagaaaagaaagaaagctcAACATCAAGTAAAGTTCTAAGTcaaACGAATACATCAGGTGTGAAGACCGAAGATTTGTCATCACATGACAATGACGACTATGCCGATAGCGATTTCAACGTTTCCCTAAGTAGTGGGCCAGATTTACATGAACAAGaagcAGTTAAAATTGAGCATGAGAGCCTAGAACGCAAGGCATGCTTTGTGTGCAAAAGCTGCTTAGTCGTTTTCGATACACATTATAAATTACTAGACCACCAGAAGATATGTATAAAAGTTGAGTGTGATGAAACCAACCGTACTTACTGCCCACTTTGCGGTACATGCTACAATGGTGCAGAGAATTTAACGAAACATATGTGGGAAAATCATGCCGACCTTATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACCATTCTTAACAAGTTGTCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAATGCGCATTTTGCAAGCAACATTTCGAAACCAAAGAAGAATTAGGATCACACTCTATAACCCATAAAGACATGAAAGTACTGTGTTGTAGCCTTTGCAAGAAAATATACCTCGATAGGAAAAAGTTTGATCATCATGGATGTATTGAAGAGAAAGCTGATGTAAACAATGTAGAAAATGATTCGGCTAAAATAGAAACCAATGAAAAAAGGACACAAAATTTTCCGTCAGAAATTACACTGCGTGAATTTCTAGATCCGACCATGGATGTGGAAAACATCAACTTGCTAATGGTATGTAGTGTTTGTAGCTGCATATTGCATTCAGAAGCTGATCTCATTAACCATCGCGATGCTGAACACCCGGAGTTGTCTCACCGGTGCAACCTCTGCACTAAGGTGTTTGCTTCTTTGCGTTCAGCGGCGCGCCACAGAAGCATTTGCAAGCAAattgaaagaaaatataaatgcAACACGTGTGGACTGAAATTCGCTTatgaaatatctttgaataaGCATATTTTAAGATATCATGAGGGACAAAGCGTGTCGGTTAAATTTATTGATTCTAAAACGAAAAGAGAAGAGAGGCAGTTTCAGTGTGATACTTGCAATAGAAGTTTCTACAAGAGAGACTTGCTAGTTAAACATACTAAAATACACATGCCGATCGAAAACTTCTTCCAATGTGATATTTGTGAAAAGAAGTTTCACCGGAGTGACAATCTACGCTCTCACAAACGAGTTCATCAGCCGCAGCGCGAAAAGACCTCATCTAGTAATTGCTTATGCCTTTACTGTGGCCGCAGTTTTTCTAACTCGTCGAACTTAATCGTACACATGCGGCGCCACACCGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGATCTTCAGTGTCACAGAAGATCTCACACTGGAGAGAAACCGTGCATTTGCCGTGTCTGTGGTAAAGGTTTTTCGCGTAGCAATAAGTTGTCCCGCCACATGCGCGTGCACACTGGCCAGCGGCCGTACAAGTGCACCTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCAACCTGCACATACGCCGACACACTGGCGACCGGCCCTACATCTGCGAAGTATGCGGCGATAGATTCATACAGGGTACCGCGTTACAGAATCACAGAAGAGCTCATGGTCACTTTCCTGCTCCCCCCACAGAAGCTCCTTCCGAGGTGCAAGCACTGACTTTTACAGTCCAGAGTATAAGCCATAATAATAGTCAATAA
Protein Sequence: MASIQESEIKIEELCRTCLSKDNELYSLFDILIGSTITLDYIVTSTTGIKISKNDGLPSTICCECKEKASKAFEFKKKSEEANMSLRGILKKEKKESSTSSKVLSQTNTSGVKTEDLSSHDNDDYADSDFNVSLSSGPDLHEQEAVKIEHESLERKACFVCKSCLVVFDTHYKLLDHQKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQHFETKEELGSHSITHKDMKVLCCSLCKKIYLDRKKFDHHGCIEEKADVNNVENDSAKIETNEKRTQNFPSEITLREFLDPTMDVENINLLMVCSVCSCILHSEADLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKQIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRSFYKRDLLVKHTKIHMPIENFFQCDICEKKFHRSDNLRSHKRVHQPQREKTSSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPTEAPSEVQALTFTVQSISHNNSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_00449489;
80% Identity: -