Xtog015337.1
Basic Information
- Insect
- Xanthia togata
- Gene Symbol
- -
- Assembly
- GCA_963853775.1
- Location
- OY970794.1:18672704-18673729[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-07 0.00016 22.9 0.0 3 39 15 52 13 57 0.88
Sequence Information
- Coding Sequence
- atgAGTACCAATGAGagaaaaaaacgaaagaaatgGGATTCTGATATGATGCTGAAGGCGTACAATgcagtaaaaaataaagaaatgggCTACTTAAAGGCCTCTCAATTTTTTTACGTCCCAAAGTCAACTTTGGAGCGTTATTGTAAAAGTGTCAATCCTATAACAGAGCTAACCTCTCTGAAAATGGGCCGAAAACCAACTTTTTCAGAAGAAATGGAACGTGAGCTTGCAGAGTACTGCATTACAATGGTGTCAAGATTCTACGGACTGAGAGCCTCTGACATCCGCTCTTTGGCGTTCCAACTGGCGATAAAGAATCTGCCACACCAATTTAATAGAAGCAAGAATACTGCAGGCCGAAATTGGATGAGAAACTTTCTAAAAAGAAATCCTCGATTGTCTTTTAGGACACCTCAAGCTACATCTGCTAATAGAGCCAAGGGGTTTTCAAAAGAGAAGGTAGACGAATTTAATGACATTTTGGAGAAAGAGTTGCCAAAAATTCATTTCGATCCAACAAAAATCTACAACGTTGATGAGACTGGCGTGACTGTAGTTCAACATAAAATGGAAAAGGTCTTATGCCTGAAAGGACAGAAACAGGTTGGCGGAATTTCGTCGGCGGAGCGGGGAGCTCTCATAACTCTAGTCACGTGTATGAGCGCGTCGGGGGTCTTCGTTCCACCCTTATTCATTTTCCCCAGAGTTAACATGAAGGAAGAGTTAAAAAATGGTGCTCCACCTGGCTCTCAGTTTGCGTGTCACAAATCTGGCTGGATACAAGTCCATATCTTTACACAATGGATTGTTCACTTCATCAACACTGTCCACCCATCTAAAGAGTGTCCAGTCATATTGATCCTAGATGGGCACTACtctcatacaaaaaatatatcaatattcACAAATGTCATTGACAAATGTCGGGAAAATGGTGTCATTCTGATATGCCTCCCCCCACATTCGTCTCACCGAATGCAGCCCTTGGATGTATCATTTATGAACCCATTCAAGACGTACTAA
- Protein Sequence
- MSTNERKKRKKWDSDMMLKAYNAVKNKEMGYLKASQFFYVPKSTLERYCKSVNPITELTSLKMGRKPTFSEEMERELAEYCITMVSRFYGLRASDIRSLAFQLAIKNLPHQFNRSKNTAGRNWMRNFLKRNPRLSFRTPQATSANRAKGFSKEKVDEFNDILEKELPKIHFDPTKIYNVDETGVTVVQHKMEKVLCLKGQKQVGGISSAERGALITLVTCMSASGVFVPPLFIFPRVNMKEELKNGAPPGSQFACHKSGWIQVHIFTQWIVHFINTVHPSKECPVILILDGHYSHTKNISIFTNVIDKCRENGVILICLPPHSSHRMQPLDVSFMNPFKTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076363; iTF_01439851; iTF_01076373; iTF_00686279; iTF_01246795; iTF_00825586; iTF_00008896;
- 90% Identity
- iTF_00686279;
- 80% Identity
- -