Etes011443.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382208.1:1944435-1945385[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-10 3.6e-07 30.0 0.0 3 39 15 52 13 57 0.90
Sequence Information
- Coding Sequence
- ATGAGTAGCAATGAGAGAAAAAAGCGAAAGAAATGGGATTCTGATAAGATGGTGAAGGCGTACAATGCAGTAAAAAATAAAGAAATGGGCTACTTAAAGGCCTCTCAATTCTTTAACGTCCCAAAGTCAACTTTGGAGCGTTATTGTAAAAGTGTCAATCCAATAACAGAGTTAACCTCTTTGAAAATGGGCCGAAGGCCAACTTTTTCAGCGGAAATGGAAGGTGAGCTTGCAGAGTACTGCATTACAATGGTGTCAAGGTTCTACGGACTGAGAGCCTCTGACATCCGCTCTTTGGCGTTCCAACTCGCGATAAAGAATGATCTGCCACACCAGTTTAATAGAAGCAAGAATACTGCAGGCCGAAAATGGATGAGAAACTTTCTAAAAAGAAATCCTCGATTGTCTTTTAGAACACCTCAAGCTACATCTGCTAATAGAGCCAAGGGGTTTTCGAAAGAGAAGGTGGACGAGTTTAATGACATTTTAGAGAAAGAGTTGCCAAAAATTAATTTCGATCCAACAAAAATCTACAACGTTGATGAGACTGGCGTGACTGTAGTTCAACATAAAATGGAAAAGGTGTTATGCCTGAAAGGACAGAAACAGGTTGGCGGAATTTCGTCGGCGGAGCGGGGAGCCCTCATAACACTGGTCACGTGTATGAGTGCATCGGGGGTCTTCGTTCCACCCTTATTCATTTTCCCCAGAGTTAACATGAAGGAAGAGTTAAAAAATGGCGCTCCACCTGGCTCTCAGTTTGCATGTCACAAATCCGGCTGGATACAAATCCATATCTTTACACAATGGATTGTTCACTTTATCAACACTGTCCACCCATCTAAAGAGAGTCCAGTAATACTGATCCTCGATGGCCACTACTCTCATACAAAAAATATAGATGTCATTGACAAATGCAGAGATATCCATAGGTTCGCAgcctctggataa
- Protein Sequence
- MSSNERKKRKKWDSDKMVKAYNAVKNKEMGYLKASQFFNVPKSTLERYCKSVNPITELTSLKMGRRPTFSAEMEGELAEYCITMVSRFYGLRASDIRSLAFQLAIKNDLPHQFNRSKNTAGRKWMRNFLKRNPRLSFRTPQATSANRAKGFSKEKVDEFNDILEKELPKINFDPTKIYNVDETGVTVVQHKMEKVLCLKGQKQVGGISSAERGALITLVTCMSASGVFVPPLFIFPRVNMKEELKNGAPPGSQFACHKSGWIQIHIFTQWIVHFINTVHPSKESPVILILDGHYSHTKNIDVIDKCRDIHRFAASG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01527120;
- 90% Identity
- iTF_01246795; iTF_01076373; iTF_01527120; iTF_01439851; iTF_01076363;
- 80% Identity
- -