Basic Information

Insect: Xanthia togata
Gene Symbol: clz9
Assembly: GCA_963853775.1
Location: OY970792.1:23540635-23542683[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-07 5.4e-05 24.4 0.0 4 41 21 59 18 61 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-07	5.4e-05	24.4	0.0	4	41	21	59	18	61	0.87

Sequence Information

Coding Sequence: ATGCCATCCGTGTACAGACGAAAGCCTGGCAGTCGTCGATATGTCGACTACACCCaggcagatttaaaaaaatgtctggATGCAATCCAATCAAAAGTGCTCACACAAAGAGCGGCTGCAGAGTTGTTTAACATTCCTCGCAGCActttgaaaaacaaattaaccCGGAAGCACCCTAACAAACCAGGTAAACCTACTATATTTACTGAAGAGGAAGAAAAGGCGTTTGAAGCTCACATAACAGCGCTTTCGGAATATGGGTTTCCTCTGACAGCATTCGacctaaaaattataataaaaaattaccttgCATCCCAGGGAAGAGTTGTGAAATTTTTTAAGGACAACATTCCTGGTAAAGACTGGTTGGCTTCTTTTCTTTCACGACATCAATCTCTTTCACGGCGACTTGCTAACAATATTAAAAGAGTTCGAGCTCAAGTGTCGGAAGAAGTTATTTCCAATTTTATAGAAAACATCGACAAAGAACTAGAAAGCGTTCCACCCGAAAACATATTCAACTACGATGAAAGCAACCTTTGTGATGACCCAGGAAAAAAGACTATATTATGCAGAAGAGGAACAAAATATcctgaaacaataataaacgcTACAAAAGTTAATTTTACTGTCATGTTCTGTGGCAACGCCGCTGGGGAAGTAGTTCCACCGTTCGTCGTTTATAAGTCGGATCATCTCTGGTCAACTTGGACTGAAAATGGTCCCGAAGGCGCTCGATACAATAGAACAAAGAGCGGATGGATGGACAGTGCAACATTTGAAGACTGGTTTCTCAATCATCTTATGCCAGTTCTTAAGAAGAAAAATGGAAGAAAAGTGGTGATTGGAGACAACCTTGCTTCACATattaacaaaacagttttgaaGGAGTGTGAGAAGCataatgttagttttatttgctTGCCACCCAACGCAACACATATACTTCAGCCCCTAGACGTGGCATATTTTCGACCTTTGAAGTGCAAGTGGCGGCAAGTATTACTTCAATGGAAGAACAGTCAACTGGGTAGGAAACTGTCGACTACACCTAAGGATCAGTTTCCACGACTATTAAAAACCGCTTTGGATTCTTTGACCGAGACCAAGGCGAATTTGATTGCTGGTTTCAGAAAGACAGGCATACACCCCGTAGATAAAGAGGAACCATTAGCTAGATTGCCCAAACAAGATCGAATTATAAACGCAGCTCTTATCGGAAACTCTTTTATGCAAACATTAGTACAGAGCCGAGCTGAGGCGTGCCCAGAACAGAAAACAATTAGAAAAAAGAAACTTAATGTACCACCTGGAAAATCAATCTGTGCTACTGATCTTGCAGAAGCAGGTCCATCGGGTTTACAGCAGgcaaaaactataaaagaaaagaaaagggcAACAAAACGAAGACAACGCAACGTTTCTTTATCTTCAAGCTGCAGTGACAGGACCATCAGTCTAGCTTCTTCCACTGAAGACCACATAATGCCTTATGACTCAGAGGATGATGTTCTTCTGGCCAACTATGTGAGTCAGATTAGTGATGCTGATGCACCTGCATTTCGAGAAGAGAAAATTCTAGATTTACCGGTCTTTGAACCTAAATCGAAACTGCAAGTTGAAGATGCCGTTGGAAAGAATAATAGAGACCATTCTGCTCTTCATCTGGGAGAGACAATGCAGGTGGATGTAGAAGGTTGTCGAGACAAAGACTTGCGGGTCTCGCCCGTACGTCAAATCGAAAAGTTAAAGCAGGATACGTTAGAGCCACCAGCTTTTCGTGGAGCTTCACGTCCTCAACTTGATCTAGACCTTGTTGTAGGCGACCATGTTCTAGTAACTTGGAATTCACGGAAATACCCAGGTCAAGTCTTATCAGTATCCGAGGAAGGAGCCTTTATAACATGTATGAAAAGAGGTAAGACATACTGGCGGTGGCCCGCGATTAAAGATGAACAGCTTTATAGTTGGAACCTTATAGTGTGTAAGATTGGACCTcctaaatttgaaaaaaagggTTCTTTCTCTGTTCCAgaaatgaatgagtga
Protein Sequence: MPSVYRRKPGSRRYVDYTQADLKKCLDAIQSKVLTQRAAAELFNIPRSTLKNKLTRKHPNKPGKPTIFTEEEEKAFEAHITALSEYGFPLTAFDLKIIIKNYLASQGRVVKFFKDNIPGKDWLASFLSRHQSLSRRLANNIKRVRAQVSEEVISNFIENIDKELESVPPENIFNYDESNLCDDPGKKTILCRRGTKYPETIINATKVNFTVMFCGNAAGEVVPPFVVYKSDHLWSTWTENGPEGARYNRTKSGWMDSATFEDWFLNHLMPVLKKKNGRKVVIGDNLASHINKTVLKECEKHNVSFICLPPNATHILQPLDVAYFRPLKCKWRQVLLQWKNSQLGRKLSTTPKDQFPRLLKTALDSLTETKANLIAGFRKTGIHPVDKEEPLARLPKQDRIINAALIGNSFMQTLVQSRAEACPEQKTIRKKKLNVPPGKSICATDLAEAGPSGLQQAKTIKEKKRATKRRQRNVSLSSSCSDRTISLASSTEDHIMPYDSEDDVLLANYVSQISDADAPAFREEKILDLPVFEPKSKLQVEDAVGKNNRDHSALHLGETMQVDVEGCRDKDLRVSPVRQIEKLKQDTLEPPAFRGASRPQLDLDLVVGDHVLVTWNSRKYPGQVLSVSEEGAFITCMKRGKTYWRWPAIKDEQLYSWNLIVCKIGPPKFEKKGSFSVPEMNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00375140;
90% Identity: iTF_01527090;
80% Identity: iTF_01527092;