Xict007937.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- Gcfc2
- Assembly
- GCA_949128155.2
- Location
- OX421934.2:19575440-19594175[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.019 2e+02 2.6 0.0 176 205 1144 1173 1132 1177 0.80 2 2 4.5e-13 4.7e-09 37.4 0.0 4 190 1165 1331 1162 1340 0.73
Sequence Information
- Coding Sequence
- atgtTCCTCATCCACAGGTTAGGAGAGCTCCAAGTAGAACGTGAAGCGACATCAGAAACACAAAGGGACCTTCGCGAGAGGTTGCTCACTTCGGCCAGGATACGAGAAAGTCGAGCCTCGCGCTGCGGGGAATTAGACGCTGCGTATAGAAGGGCACAGGCCATACGCGGGTATCTGACTGACCTTATCGAGTGCCTTGATGAGAAAATGCCACAACTGGAGGCGTTAGAAGCTCGAGCGTTGGCGTTACATAAGCGTCGCTGTGAGTTCCTCGTAGAAAGGCGACGAGCCGACTTGAGGGATCAAGCGCAAGATGTACTCGCACCACCTGGTCGAGTGTCAAAGCAAGCTGATAACGAAGAGAAAACGCGACGCGCGGCCGAGCGCGAGGGACGTCGACGCGCGCGCCGCCTCACGCGCgaggccgccgccgccgccgccggcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGGTCAGTCcaggccgccgcgccgcgctgccgcaccgGGACGGGGACTCGGACGACGACGAGCTGCCTCCGCATGAGATGCACCACTACACGCAGGAGAGAGCCGCGATCCGCGCGCAGTGCGCGGCGCTGTTCGGCGACGCGCTGGCGGCGTGGCGCAGCGCGCGCGGCGTGTGCGCGCGCCTGGCCCGctggcgcgcgcgcgccgccggccTGTACGGCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTACGTCAGGCACGAGCTAATTCTATGGAACCCGCTAGCAGACGAAGACAATGAAGACTATGAGAGAATGGATTGGTACAAATGTCTGATGATGTACGGCGTCCGTACTGAACGTGGTGCTGACGACTCCTCAGAATCAGCGTCAGAAGGCGAAGTGGAGCCTATTCCTGTGACGGACAGTACGGTGCGGGAGGACCCTGACCTGCTGCTGGTGCCCAGCATCATCAGTAGGGTGGTGCTGCCTTATCTGAcagAGCTAGTATCAGTAGCGTGGGACCCAGTAAGCGTGCGCTCGTGCATACGCCTGCGTTCACTACTAGTTCGGGCCGCGGGGCTGCCCACGTGCTCCAATGCGTTACGTCGCCTGTCGGCGGCGCTACGGGCAAGGTTGGCTGTGGCCCTTGGAGCTGATGTGTTCCTGCCTGCGTTACCTCCACAGGTAATGGAAGGTGTAGGCGGCGCTTTTTGGCGTCGTTGCCTAGGCGCAGGAGTGCGACTTCTCCGTGCTACGCTCGCGCTCACTGGCCCGCCTGCACTGTTGTATGCTGACCCGCTCGTAATGTCGCTTATAGACACGCTGtgctgcggcgcgggcgcggcgggcggcccGTACATCGCGAGCGCGGCCGCGGCGCTGTCGGCCACGCTGCCGCGCGCGGGCGCGCTGCGCAAGCGGGCGCTGGCGCGGCTGGCTGCGCTCGCTACTTTAGCACTGTCGAGGCTCGATAGTGACAACCCGCTGCATCTaaaagcCCTGGAACAAGCAAGAGCAGTGATCGCTGAAGCTCGAGCGATTGAATGA
- Protein Sequence
- MFLIHRLGELQVEREATSETQRDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRVSKQADNEEKTRRAAEREGRRRARRLTREAAAAAAGAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERGERSVQAAAPRCRTGTGTRTTTSCLRMRCTTTRRREVSPGRRAALPHRDGDSDDDELPPHEMHHYTQERAAIRAQCAALFGDALAAWRSARGVCARLARWRARAAGLYGDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERGADDSSESASEGEVEPIPVTDSTVREDPDLLLVPSIISRVVLPYLTELVSVAWDPVSVRSCIRLRSLLVRAAGLPTCSNALRRLSAALRARLAVALGADVFLPALPPQVMEGVGGAFWRRCLGAGVRLLRATLALTGPPALLYADPLVMSLIDTLCCGAGAAGGPYIASAAAALSATLPRAGALRKRALARLAALATLALSRLDSDNPLHLKALEQARAVIAEARAIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -