Xict026971.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- -
- Assembly
- GCA_949128155.2
- Location
- OX421950.2:11137045-11139159[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 5.2e-06 27.3 0.0 2 42 16 56 15 58 0.94
Sequence Information
- Coding Sequence
- ATGCCTGGCAATTACAAAAGAAAGTCGACGCGGAAAAGTTGGTCTCAAGAAGACATGAATGCGGCCATTAAAGctgtaaaggaaaataagatGGGTTGGCTTTTAGCATCTAAACATTTTAATGTGCCACAAGCAACTCTTCGTCGCCATTATGATAGAACTCCAGAGAATCTTGGACGTTTTAAACCAACATTTACGGCATCAATGGAAAAAATGCTAGTGGATCACATGCTCGAGTTCGAAAGTCGACTTTTTGGATTTAACACCACAGAAATAAGGAAATTAGCTTATGAATTTGCGGAAAAATTGGGACTAGATCACAgattcgataaaaataaaaaaatagctgGCTGGGATTGGCTGAAAGGGTTTAGAGAGCGTAACCCAAATATCTCTCTCAGAGCTCCAGAGCCAACTTCAGCTGCAAGAGCAAGGGCATTCAATAAACCTCAAGTAATGAAATTTTTTTCCCTTTTGGAAAAAGCAGTGACTGATAATGGGATTCAAGCACACAGAATTTACAATATGGACGAGTCTGGACTGAACACTGTTCAAAAGCCACCAAAAGTGTTTGCATCAAAAGGGAAAAAACAAGTCGGTGCTGTTACTAGTGCTGAACGTGGTGAACATTTCACAATTGTTGCTTGTGCTAATGCTATCGGAAAATACTTTGACGGTATTCCACCGGGCAGTTTAGAGCTGTGCCACCCTTCTGGATACATGACCGGTGACTTATTTTTTAAGTGGATGCGCCATTTTGTTGCTTTTGTGAATGCTTCTTTAGCAAACAAGGTATTGCTAATTCTTGACGGTCATTCCAGTCACAAAAATCTAGATGCGCTTGAATTTGCTAAGGCCAACGGCGTGGTAATGCTCTGTTTTCCTCCCCATTGCACTCACCGAATGCAACCAACTGATTTATCATTTTTTGGTCCACTTCAGGCGTATTATGACCGTGAGATGTCAACATGGATGAAAAACCACCCTGGCAGAACTATAGGCCTATATCAAGTTGCTCAACTTTTTGGAAGAGCCTACGAAATTGCAGCCTCTGTCAGAAATATAACGAGTGGTTTTGAGAAATCTGGAATTTATCCCTTTAATCCACACATTTTTCCAGAAGACCTGTATTTACCTAGCGCAGTTACCGAAAATGAATTGACTAACGAAGATGAGCCAGTTGCAAGTAGTTCATCTCAATCCCGAGTAAACTATGAAGAGTGCGATTCCTCAGAATCTACTGATATTGACGAACAGTTAATGGCGATAGCAACTGCTAACTCATATGAccaaataaattttgaaacatGTGACACCTCTGAAGACGTTTTAAGTGGTCACTCATCCCCAACAATTTTGTTACCGAATGATGCTACGCAATTATTAATATACGGACAACAAAGTCTGGTAGGCGATAAAACTGTTGAACAAGAACTGTTAGACAGTGAAGCTGTTCAAATAAACGATCAAGTTGTTGGTCAAGAGCAGACAGGCTACGGAGTTGTTGGGCAAGAGCCGATAGGCATCGAAGCTTGTCCAGAAACAATTTGTGGAGAGGATAAAGAACAAATGTCGGGTAGCAATCAAATTTTAACTGGACTTttgcaaactaaaatattaacgaCGAAGTGCATACTTAAAGAAATATCACCACTACCAAAAGCTGCTTCAACAGGAAATGCAAGGGGTAACAGAAAAGTCGGTGGAGCGCAGGTTTTCACAGCCACTCCATTTATGAGTGATATAAAAGCAGCAGTacagaagaaaaaagaaaaggaaaatcGTCAAtctcttaaaaaacaaaagcaaacGAAGCGTGTTATTTTTGATGATGAGAATGTGAAACCCCAGCCTGCACCTAAAAAATCTAGACCCACACGAATTCAAAAGCAGACGAAGCCAGTTCAGGATGATGACGAGGACCTCGAGGATCCATACGCTAATGAGGACGAGGAAAAAGATGATCCAGCTTGCATTTACTGCAATGAGTTATTTAGCCAATCTAGGCCAAAAGAACATTGGGTGAAGTGTCAACTTTGCTCTAATTGGTGTCATACACTATGCGCTGGCATACCttctaaaaagaaaaattttatttgtgaacTTTGctcttaa
- Protein Sequence
- MPGNYKRKSTRKSWSQEDMNAAIKAVKENKMGWLLASKHFNVPQATLRRHYDRTPENLGRFKPTFTASMEKMLVDHMLEFESRLFGFNTTEIRKLAYEFAEKLGLDHRFDKNKKIAGWDWLKGFRERNPNISLRAPEPTSAARARAFNKPQVMKFFSLLEKAVTDNGIQAHRIYNMDESGLNTVQKPPKVFASKGKKQVGAVTSAERGEHFTIVACANAIGKYFDGIPPGSLELCHPSGYMTGDLFFKWMRHFVAFVNASLANKVLLILDGHSSHKNLDALEFAKANGVVMLCFPPHCTHRMQPTDLSFFGPLQAYYDREMSTWMKNHPGRTIGLYQVAQLFGRAYEIAASVRNITSGFEKSGIYPFNPHIFPEDLYLPSAVTENELTNEDEPVASSSSQSRVNYEECDSSESTDIDEQLMAIATANSYDQINFETCDTSEDVLSGHSSPTILLPNDATQLLIYGQQSLVGDKTVEQELLDSEAVQINDQVVGQEQTGYGVVGQEPIGIEACPETICGEDKEQMSGSNQILTGLLQTKILTTKCILKEISPLPKAASTGNARGNRKVGGAQVFTATPFMSDIKAAVQKKKEKENRQSLKKQKQTKRVIFDDENVKPQPAPKKSRPTRIQKQTKPVQDDDEDLEDPYANEDEEKDDPACIYCNELFSQSRPKEHWVKCQLCSNWCHTLCAGIPSKKKNFICELCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951762;
- 90% Identity
- iTF_01525921; iTF_01525922; iTF_01525923;
- 80% Identity
- -