Basic Information

Gene Symbol
zfh2
Assembly
GCA_029784165.1
Location
CM056644.1:22335450-22354192[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 1.8 1.9e+02 4.5 1.8 2 23 218 240 217 240 0.94
2 13 0.00032 0.035 16.3 1.4 2 23 535 557 534 557 0.96
3 13 8e-05 0.0088 18.1 0.7 1 23 589 613 589 613 0.92
4 13 0.047 5.1 9.5 0.4 1 22 683 704 683 707 0.91
5 13 0.43 47 6.4 0.0 2 23 1338 1360 1337 1360 0.94
6 13 4.3 4.7e+02 3.3 2.2 2 19 1407 1424 1406 1427 0.95
7 13 0.0042 0.46 12.7 4.5 1 23 1478 1500 1478 1500 0.96
8 13 0.0086 0.94 11.8 1.1 2 23 1507 1529 1506 1529 0.93
9 13 0.00099 0.11 14.7 0.1 2 23 1621 1644 1620 1644 0.91
10 13 0.48 52 6.3 0.6 1 22 1682 1703 1682 1706 0.89
11 13 0.0028 0.31 13.3 0.1 1 23 1776 1800 1776 1800 0.93
12 13 6.2 6.8e+02 2.8 0.2 3 20 1901 1918 1900 1920 0.89
13 13 0.00019 0.02 17.0 2.8 1 23 2466 2488 2466 2488 0.98

Sequence Information

Coding Sequence
atggCTTCTCGTAAGAACGCAAAATTCTCCACCAAAATCCAGTTCTATCTGAAACACAGGGAATCGCGGATACTGAAGCTATGCAACGACACAATCGGCCCAGTACCGAACGATTCGCTCACCCGAGCCATCTTCAAGCTGCTGTCGAAGCCGGTGGACAACAAGCGCCTCATTCAGCTTCTTGCCGAAAAGAAACGCTGCTCCACCAAATCGACTGCCTCGCACAGCACCCTGAAGACGCCCCAGCAACAGCCAACCCCGCTAACGGTTCCCACAGCGTCGACGCTGTCTGGGGCCGTGACGGGTGCCGTCGCGCTGCCCGAGTATCAGAAAGAAGTGGAACGGTTTCGGGGACGCATCATCTGCCAGGACAACACGTGCATCATCGACCCGGCGGCCTCTCCCAAGAACGACAACAATTCGAATCCTCGCACTCACTCCTTCCGAATTGTCTCGTTCAGCAAGGAGGGCAGCAATGGCAACaacggcagcagcagcaacagcaacacagGAAGCGGAAAGTCAGCCTCATCGGACTGTTCCTCGTCGCCACTTGGCGGTGACGGTGGCCGGGACTCGATGGACGAACAGGTCCAGAATCTCAGCACACCGCCGGCCGCGTCGACACAAGCTGGCCACAAGGCGATTCTGATGTGTTTCAGCTGTAAATTGAGCTTCGGCACGTGCCGGTCGTTCATCGCTCATGCCAAAATGGAGCACAGCCTCACCCTGAACGATTACGAGCGGATGCTGCTCGAGAAGAACTACAGCAGCGCCATCATCCAGACCAACACCGAGAGGCAGTTCTACTTTCTGGTTCCTTTCGAAGAGAAATCTTCtgccaacaacagcaacaacccTAGCATTAAGTCTTCGATGGAAAGTGAAGAACGGTTCAAGAGTGGGATCGCTGCACTCAGCAATCAGCAACTTTCgccacagcagcagcaacaacaacaggtACAGCaacatcaacagcagcagcagcagcaacaacaacatcagCTACCTGTCCAAGCGCCAGAGAAAAGCCCCGGTAGCATCAACTTCGATAGTGGCTTCCCGAAACTCACCCCCAGCAGTATGCTCTACGACATGGACAATAAACTGCAGGCGAGTTGGAAGCTAGCCGCTGAGAAGTACAACAACGCCATGAACGAAAGTGTGGCGGCCGCAGCGGCTGCAGCCGCAGTGGCCGCTGCCCAAGAGGAGAAGAACGCCGCCAGCGGGAAACTGTTGACGGATTTCCTAACCCAGCAGAAAATGCTGTCGGCAGCGGAAAACCTTTACAACAAGCAAAACAAGTTCCTGGAGTTGATGAACACCAACCCACTGGCAGCGGCCGCTGCAAAGGCGGCCGTCACCGGGGCGGGTGTTGATGCGACTAGCGATTTTCAGATGGCCAAAAAATACAACGCAATGGATCTCTACAAGCAGCTGATGGCGGCGAACAACTTCCGACCGGAGGGCTTGGAGCTGAAGGAAGAACTCAAGAGCGAGCATCAGATAAGCGTTAAAAAACTAGAGACTGAAGCATCGGCTGCATTCCGCAACAGTAACTTTGCGCCAAATATCTCCACGAGGAATTCCTGCAAGACACTAAAATGTCCTCAGTGTAACTGGCACTACAAGTACCAGGAAACGCTGGAGATTCACATGCGGGAAAAGCATCCGGACGGGGAAACCGCGTGCAGCTACTGTTTGGCAGGTCAGCAGCATCCACGACTGGCACGGGGTGAATCGTACACCTGCGGCTACAAACCGTACCGTTGCGATATCTGTAACTATTCCACCACCACGAAGGGTAACCTGTCCATTCACATGCAGAGCGACAAGCATCTGAATAACATGCAGGATCTAAACGGAATGATGAACAAGGGTAATCAgaactttttaaatcttgccaCCCTTCAGGCCACGGAGAAAGTTAACACATCTCGCAACCAATACATGCAAGCCACCTCGCCCCTCTCGTTGACCACCAAGCTAACCCAGCAGCCCAAGGAATCCCCCAGCAGCTACGAAACGAGTCGACCGAAATCGTTCTTCAAGTGCGACATCTGCAATTACGACACCAACATCGCGCGGAATCTCCGAATCCACATGACTAGCGAGAAACATATCAGCAATCTAAACTCGCTGCAGTCCAGTTTCAGCCAGCTGAAGAACCTCCAGAGTATGTCGTCCGCCGAAAACCTCGACTACCTGAGTGCGCTCAGCTTGAACGCCCTGAAGGATGATCCCACGCTAAGCCGAGTCGAAGACTACAGCAGTAACGCACTGAAGCCGCTCTCGATTCCATCGTCTCCCTTTGCTCCCATCGATCCGACCCCCGGCAGTACCGCCAACAGTACACCAACACCGGAGTCCCTCTTCCTCAACAATCCGTCTCCCTTCTCGGGTGGAAGCGATACCGAGCGCCTCGCAGCCGGCGAATTCCACCAGCTGGACGAAGACAAAAACCCTCTCCACTTCGAACCGCCGATCAGAGTCACACTGGACCCATCGACTTACTACACCTGTTTGATCTGTTCGGACTTCGACACCAACAACCTGGAGGAGCTGAAGAAGCACGTGATCAAGGACCGCTTGACGTCGAACATCGCAATGGATACGATAGTGATCGCTGCAGCTAGCTGCGAGTGCCTCCTGTGTGGCTTCCGTTCACCGAACGGACCTGACAAGCACGATCTCGAGCGGCACCTGAAGACGGAAGCCCACCTCAAGCGGCTCGATGTGATGATCCATCTGCTCGAGGGAAGGGACAAAGCGATCGGCAAACTGCGCCAGTTCTGCGGTTCCGAGCTGTTCAAGAAGCTGTCTCTCATCTTCCCGCTGGCCACGGAGGAAACGAAATTTCCGTACGAAGAAATGCCTAGCATTGGTGAAATTTCGCGTTCTCCACTGTCGCTGCTGCTGGAACCCAAGACCGAACTTGTGGTTGATCGGGAGTTTGGTGGTATTAATGGTCTCGATAATGAAGGAACTCAACCGCACCCGGACAACGTTCAAATCAAGTGCAACTGCTGCAACTACTACACGACCTCGCTGGAGAAAATCGGCATCCACAGTCTGTCGGAGAAGCACATCTTCCGGCGGATCTGTTTCGACTACTTGCTGCTTATCTCCAGCGAGAAGAACGCTTCCGCCGGGAGCGGAGGTTCGCTCAGTCCGTTGAACTTGCAGCACAGCATGAAGCAGGAAGAGAATCGTCCGGGAGTGGGCTGTCTGATGCTGACCTGTGTGCCGTGTGGGTATAAAACCGACCACATCTACTACATGATCCACCATCTGAAGAAGTCCTGCAAGGTGGAGCAGAACATCAACCTGCTCGGACTGCGCAACATCTTTAAGTTGACTCCCAAGGGCGCCGAATCCCAGGATGCAATGGACTCGGCCTCGGCGGCTACCGGAGACAACAACAACGGTGGTAGTGGTGGCGGTGGCAGCGGCAGTGGTAGTGGCGGcagtagtagcagcagcagcaccagtagCACACTCGGGACCCTGTGCAGCATCCTGCAGGAGAAGAAACCCTGGAACGGGGAAAACTGCAACGGCAAAAGTGGCAGCATCAGTGCGTCCGGTGTCACCACCGGAACTGCTGGTTCCGGCCACAATGGCGACGGCGGTGGTTCGACCTGCAAGGATCGCTGTCTAGTTTGCAGTGTGTGCAACGATTTCTCCTCGAAGAAGATCAACGTGATGCAGCACTTGCTGGCGAATCACAACATTGGGAACGAGCTGCTCGCGCAGGACTTCCCCAATTTGAATGTGCCATCGACGATGCAGAAGAAACCGTTCGACTACCTGCGCACGCTAACGGAGGCTCGCTGTGCTCAGAACCTGCGGCTCATCGAGAAGGTTACCTTTATGAACGACACTTTCGCCTTCAAGGAGAACTGCAACGATCTGAAGCACGGCAATCTAGCGGAGATTCTCGAAAGCTACATGGGAGGTGGAAAGGATGGAGATGGAGATAAAATCGAGAAACATCACCTGCAGACAGTGTCCTGTCCGCTGTGTCCGGAGACGTTCCTGGATCAGGTGAACGTGGAAACGCACGTAATCCGAGTGCACAACATTAAGATGGAAGGCTTGAACCGACTGCTGAAGCTGGTTGATACCTCGCAATTTCTTAAGACCACCAAACAACAGCAGCTTGGCAGTAGTCCGGACAAGTCGCCGAAGAAGGAAACCTCGCCCTCGCCGGAGATCAAATGCTCCTTCTGTAAGGTCTGCTTCGACTCGATGGTAGACCTGAAGATACACTGCAACGAAAGCAATCACTTCAAGCGGAACGCTGACTCGGAGGATCTCGCCTGCTTCCTGAACGACTGCAAGGACGCATTCGACAACCTCTCCGATCTGCACCAGCACTTCAAGGCAAACCATCTCAATTTTCTGATCTCGGAGAATCACACCTACAAGTACCGTTGCAAGTTGTGCCCGTTTGCGTTCAAGACGCATGAAAAACTGAACCGTCATCTGTTCTATCACTCGCTGCGGGAATCGACCAAGTGCTTCTACTGCGATGCCACCTTCAAGAACATCAACTCTCTCACGAGCCACATCACAGAGAAGCACCCGCAAGAATCGTCCGCCCCGAAGGGGGGCTCCGAAACCCAACAACAGCAGGACGCGGCGTCGATTCTCTTCTTCAAAGATCTGAAGCGAAAGATGATGAACAACAAGAACGGCATGAGTCCCAAGTCGGATCGGAGCCAAACGCGGGACAGTGCGGACGAGGATCGGCTCAGTGAGAAGTCGATGAGTAGCAAGAGTAGTTTGTACTACGACAAGAGCTTGGACGGCTCGGATGGTGGTGGTGGAGGTGGAGGAACGGTCGTCGCGAAGATCTCCTGCAACGATTGTCGCTTTAACTTCACCGATGCGGCGGCTCTCGAGCGACATATGGCCACGGCATTCCATATGTCGAAGGAGAAGGAAAAAGCCGCGGCGGACAGTCTGGCGGGTATGGCCAATAAGCAGCAGTTGTTCTACGATATTAAGTCGGAGAAGTTCACCAACCCGAATCGGCCCTTCAAGTGCACGATCTGCATGGAGAGCTTCACCCAGAAGAACATCCTCCTGGTGCACTACAATAGTGTGTCCCACTTGAACAAGCTGAAGAAGCTGAAGTCCGACAAGCAGCACCCGTTCCCGTTTCAGATTGGGGCTGCCATGGGGGAGGGGGATGGGTGCGAACATGGCGGCGGTGGGGATAAGCAGCCGCCCGATTTTAAGCCATTTGGGATGCAAATGTTTGCCGAGGGTGGCGAGAAGCGGAAAGATCTGGAGGAGAAGGAAACGGCTAGAAAGAAGTTCAAGTGCGATATCTGCAACGTGGCGTACACCCAGGGAAGCACGCTGGATATTCACATGAGGAGTGTGCTGCATCAGACCAGAGCATGCCGGCTGCAGGAGCGGAGCATGTTTAATaatCAATTGCAGCCACTCGATAAGAAGAAACCGGAATTTTCACTGATTCAGACGATTCCGGAGAGTCACGAGTCCCCGAACTTCATCGACGATACGCCAATGCGTAAGATAAAATCTCCAGCCGATCTTCAACCACAGCCGCAACttccgcagcagcagcagcagatgccCCAACAACCGGCCATGTTGAACCCCATGATGGGAGCTCTTGGCTTGGGAGGTACCATGACCGGCTTGGACAAGCCAGAGATTGCCATTTGCGAGTGCTGTTTCCAGGTGTTCCCTAATAAACCTACTCTGGAAACTCACCTCGAGCTAAGTCCGGAGTGCTTAgctctgaagaagaaaatgatggAAAACAGCAATCCCACTCCGGAAAACTTCGCCGAAGGCTTTCAGCAGCAAGCCCTGAATGAACTGGCGAAGGTTAACCCCTTGCCCGGGTTTGATTTAACCCCGGAAGCGCTGCTAGGGAAGTCGCCCTTCCCGATGGATCCAACCGCCAATTTGATGGATccgaattttttgaaaaacgccTCGCTGCTTCAGTTTGCCACCGATCCGAACAACAAACTGGGCCCGAACGCTTTGAACGTACTAAATTTCATGCACTTCCACCACTTGATGTCGCTTAGCTATCTAAACCTCGCACCTCAGCTGAACTTCGGCGCTGTACCGCCAAAAGTTCCTGATATAACAGCTAAAACCGACCTCGAGAAGGTCATTCCGGTGGACAAAACTAAATTACCCCCGGGAGTAATGCAGTCGAACCTCAACGGCAAACCTCCGCTCGATTTGAACCTCATGTCCCACAATCTGGAATCCAAAATGCCCCCACAACCCCCACAGCAGCAACCGTGCACCCAGAAACGCGCTCGAACTCGTATTACAGATGAACAGCTACGTATTTTGCGTTCCCACTTCGACATCAACAACTCACCCAGTGAGGAGAGCATCCAGGAAATGTCCATCAAGGCTAACCTTCCGCCTAAGGTTGTCAAGCACTGGTTCCGCAATACCCTCTTCAAGGAACGCCAACGCTCCAAGGACAGTCCGTACAACTTCAGCATTCCACCCTCGACGAAGCTCAACGTCGAAGAGTACGAGCGCACCGGTGAAACAAAAGTAGTCGACCTGGACACCTCCTTCAAGTCCAACGACTCCCAGGACACCTCGCAGAATGCGGTCGATCTCAAGCTGAACGAGATGAAGCAAAGTTTTTCCAAATCCCTCATGGAATCCCTCTCCAAGCATCAGGCCAATCAGGAGTTGGGTAACTTTCAGCTAAATAAAAACCTTTTTCCGGATAACTTCGGCTCTGACTTCCAGAGCCAACACGACCAAGCATCCCAACTGCAAGCCAACGTTGCCAACTTTTTCTCCCAAGCTCCCGACCTGAACAACCTGAACCTAAGCAAGGAGCTGATGtcgaacaaaaagaaaaaaatcaaatccgAAACCTCCTCTAATGCCTCCCCTACGCCGGTCGATCTGCAGATCGATTCCAGCAACTCCAGTCCCCTTCCGATGCGCCCGCCCAGTGCCATCAGTCTGAAGAAGCACATGGAAGCTCGCCCGCTCGGTACGCCCGGGTTGATGGAAGAAATCAAGATCCCCAGTCCGATCGAGAGTCCGGTCATTTCACCACCGACTTCGATTGCTGGTGGGCTGCATCAGCAGCTGTCCCAAAACCAGGCCGTCACTTGCTCCAACGGAAAGCGTGCCAATCGGACCCGGTTTACCGACTACCAGATCAAGGTACTGCAGGAGTTTTTCGAGAACAATTCCTACCCAAAGGACAGTGATCTGGAGTACTTGAGCAAACTGTTGATGCTGTCCCCGCGGGTTATCGTCGTTTGGTTTCAGAACGCCCGCCAGAAGCAGCGCAAGATCTACGAGAATCAACCGAATCCGACCTTCGAGACGGACGAGAAGAAGGCGATCAACATCAACTACACCTGCAAGAAGTGCAACCTGGTGTTCCAGCGGTACTACGAGCTAATTCGCCACCAGAAGAACCACTGCTTCAAGGAGGAAAGCAACAAACGTTCGGCCAAGGCGCAACTGGCGGCCGCCCAGATTGCGCACTCCTTCACCAGCGGCAGCGAGGACTCGGACTCCAGCATGGACGTCAGCCGACGGGAGTTCCAACCGCGCGAAAACGACTGCCCCTTCTAA
Protein Sequence
MASRKNAKFSTKIQFYLKHRESRILKLCNDTIGPVPNDSLTRAIFKLLSKPVDNKRLIQLLAEKKRCSTKSTASHSTLKTPQQQPTPLTVPTASTLSGAVTGAVALPEYQKEVERFRGRIICQDNTCIIDPAASPKNDNNSNPRTHSFRIVSFSKEGSNGNNGSSSNSNTGSGKSASSDCSSSPLGGDGGRDSMDEQVQNLSTPPAASTQAGHKAILMCFSCKLSFGTCRSFIAHAKMEHSLTLNDYERMLLEKNYSSAIIQTNTERQFYFLVPFEEKSSANNSNNPSIKSSMESEERFKSGIAALSNQQLSPQQQQQQQVQQHQQQQQQQQQHQLPVQAPEKSPGSINFDSGFPKLTPSSMLYDMDNKLQASWKLAAEKYNNAMNESVAAAAAAAAVAAAQEEKNAASGKLLTDFLTQQKMLSAAENLYNKQNKFLELMNTNPLAAAAAKAAVTGAGVDATSDFQMAKKYNAMDLYKQLMAANNFRPEGLELKEELKSEHQISVKKLETEASAAFRNSNFAPNISTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGETACSYCLAGQQHPRLARGESYTCGYKPYRCDICNYSTTTKGNLSIHMQSDKHLNNMQDLNGMMNKGNQNFLNLATLQATEKVNTSRNQYMQATSPLSLTTKLTQQPKESPSSYETSRPKSFFKCDICNYDTNIARNLRIHMTSEKHISNLNSLQSSFSQLKNLQSMSSAENLDYLSALSLNALKDDPTLSRVEDYSSNALKPLSIPSSPFAPIDPTPGSTANSTPTPESLFLNNPSPFSGGSDTERLAAGEFHQLDEDKNPLHFEPPIRVTLDPSTYYTCLICSDFDTNNLEELKKHVIKDRLTSNIAMDTIVIAAASCECLLCGFRSPNGPDKHDLERHLKTEAHLKRLDVMIHLLEGRDKAIGKLRQFCGSELFKKLSLIFPLATEETKFPYEEMPSIGEISRSPLSLLLEPKTELVVDREFGGINGLDNEGTQPHPDNVQIKCNCCNYYTTSLEKIGIHSLSEKHIFRRICFDYLLLISSEKNASAGSGGSLSPLNLQHSMKQEENRPGVGCLMLTCVPCGYKTDHIYYMIHHLKKSCKVEQNINLLGLRNIFKLTPKGAESQDAMDSASAATGDNNNGGSGGGGSGSGSGGSSSSSSTSSTLGTLCSILQEKKPWNGENCNGKSGSISASGVTTGTAGSGHNGDGGGSTCKDRCLVCSVCNDFSSKKINVMQHLLANHNIGNELLAQDFPNLNVPSTMQKKPFDYLRTLTEARCAQNLRLIEKVTFMNDTFAFKENCNDLKHGNLAEILESYMGGGKDGDGDKIEKHHLQTVSCPLCPETFLDQVNVETHVIRVHNIKMEGLNRLLKLVDTSQFLKTTKQQQLGSSPDKSPKKETSPSPEIKCSFCKVCFDSMVDLKIHCNESNHFKRNADSEDLACFLNDCKDAFDNLSDLHQHFKANHLNFLISENHTYKYRCKLCPFAFKTHEKLNRHLFYHSLRESTKCFYCDATFKNINSLTSHITEKHPQESSAPKGGSETQQQQDAASILFFKDLKRKMMNNKNGMSPKSDRSQTRDSADEDRLSEKSMSSKSSLYYDKSLDGSDGGGGGGGTVVAKISCNDCRFNFTDAAALERHMATAFHMSKEKEKAAADSLAGMANKQQLFYDIKSEKFTNPNRPFKCTICMESFTQKNILLVHYNSVSHLNKLKKLKSDKQHPFPFQIGAAMGEGDGCEHGGGGDKQPPDFKPFGMQMFAEGGEKRKDLEEKETARKKFKCDICNVAYTQGSTLDIHMRSVLHQTRACRLQERSMFNNQLQPLDKKKPEFSLIQTIPESHESPNFIDDTPMRKIKSPADLQPQPQLPQQQQQMPQQPAMLNPMMGALGLGGTMTGLDKPEIAICECCFQVFPNKPTLETHLELSPECLALKKKMMENSNPTPENFAEGFQQQALNELAKVNPLPGFDLTPEALLGKSPFPMDPTANLMDPNFLKNASLLQFATDPNNKLGPNALNVLNFMHFHHLMSLSYLNLAPQLNFGAVPPKVPDITAKTDLEKVIPVDKTKLPPGVMQSNLNGKPPLDLNLMSHNLESKMPPQPPQQQPCTQKRARTRITDEQLRILRSHFDINNSPSEESIQEMSIKANLPPKVVKHWFRNTLFKERQRSKDSPYNFSIPPSTKLNVEEYERTGETKVVDLDTSFKSNDSQDTSQNAVDLKLNEMKQSFSKSLMESLSKHQANQELGNFQLNKNLFPDNFGSDFQSQHDQASQLQANVANFFSQAPDLNNLNLSKELMSNKKKKIKSETSSNASPTPVDLQIDSSNSSPLPMRPPSAISLKKHMEARPLGTPGLMEEIKIPSPIESPVISPPTSIAGGLHQQLSQNQAVTCSNGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLMLSPRVIVVWFQNARQKQRKIYENQPNPTFETDEKKAININYTCKKCNLVFQRYYELIRHQKNHCFKEESNKRSAKAQLAAAQIAHSFTSGSEDSDSSMDVSRREFQPRENDCPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00949288;
90% Identity
iTF_01524524;
80% Identity
iTF_01524524;