Basic Information

Gene Symbol
zfh2
Assembly
GCA_030247185.2
Location
CM058071.2:148435826-148456749[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.7 1.3e+02 4.5 1.8 2 23 229 251 228 251 0.94
2 14 0.00031 0.024 16.3 1.4 2 23 540 562 539 562 0.96
3 14 7.8e-05 0.0061 18.1 0.7 1 23 594 618 594 618 0.92
4 14 0.045 3.5 9.5 0.4 1 22 689 710 689 713 0.91
5 14 6.5 5.1e+02 2.6 0.2 2 23 1210 1232 1209 1232 0.92
6 14 0.41 33 6.4 0.0 2 23 1328 1350 1327 1350 0.94
7 14 4.2 3.3e+02 3.3 2.2 2 19 1397 1414 1396 1417 0.95
8 14 0.0041 0.32 12.7 4.5 1 23 1468 1490 1468 1490 0.96
9 14 0.0084 0.66 11.8 1.1 2 23 1497 1519 1496 1519 0.93
10 14 0.014 1.1 11.1 0.2 2 23 1606 1629 1605 1629 0.90
11 14 0.47 36 6.3 0.6 1 22 1667 1688 1667 1691 0.89
12 14 0.0027 0.21 13.3 0.1 1 23 1764 1788 1764 1788 0.93
13 14 0.75 59 5.6 0.4 3 20 1899 1916 1898 1918 0.89
14 14 0.00018 0.014 17.0 2.8 1 23 2465 2487 2465 2487 0.98

Sequence Information

Coding Sequence
atggCATCTCGCAAGAACGCAAAATTCTCCACCAAAATCCAGTTCTATCTGAAACACAGGGAATCGCGAATACTGAAGCTATGCAACGACACAATCGGTCCCGTACCGAACGATTCTCTCACCAGAGCCATCTTCAAGCTGCTGTCGAAGCCGGTGGACAACAAGCGAATCATTCAGCTCCTCGCCGACAAGAAACGCTCCTCCACCAAATCGACTGCTTCGCACAGCACCATGAAGACGCCCCAAACGGCAACGCCCACGACGACGACGTTCACATCAACGGCTTTCCCGGGCCTCCCACTGGTAACCGGCACCGGTACGACATCCTCGGTGACGGTTCCCGGTACCGGTTTAGGTGCCGCCGTGTCCCTGCCCGAGTATCAGAAGGAAGTGGAACGGTTTCGTGGGCGCATCATCTGCCAGGACAACACCTGCATCATCGATCCAGCGGCTTCTCTTAAGAACGACAACAATTCAAATCCTCGCACTCACTCCTTCCGAATTGTCTCGTTTAGCAAGGAGGGCGGCAGCAATGGTAGCAGTAGTCACAAGGCATCCTCATCATCGGACTGTTCCTCGTCGCCACTTGGCGGTGATGGTGGACGAGATTCCGTGGACGAACAGGTTCGCAATCTCGGTTCACCGTTGGCCGCGTCGACACAAGCTGGCCACAAGGCGATTCTGATGTGCTTCAGTTGTAAGCTTAGCTTCGGTACGTGTCGGTCGTTCATCGCCCATGCCAAGATGGAGCACAGTCTAACGCTGAACGACTACGAGCGGATGTTGCTCGAGAAAAACTACAGCAGTGCCATTATCCAGACCAACACGGAGAGGCAGTTTTACTTTCTGGTTCCTTTCGAAGAGAAATCTTCAGCCAACAGCATCCCTAGCATTAAGTCTTCGGTGGAAAGCGGTGAGGAGAGGTTCAAGAGTAGTATCAGTCACAGTCTCAGCAGCGGTAGTGGCGGAGGAAGTCAACAGCTGTCACCTCAGCAGCAACAGGTGCAACAAATTCAGTCATCTGTCACAACGCCGGAGAAAAGCCCCGGTTCCATCAGCTTCGATGGTGGCTTTCCCAAACTCACACCTAGCAGTATGCTCTACGACATGGACAACAAACTGCAGGCGAGTTGGAAACTAGCCGCCGAGAAGTACAACAATGCCATGAACGAAAGTGTGGCGGCCGCGGCGGCGGCTGCTGCAGTAGCAGCGGCTCAAGAAGAGAAGAACGCTGCCAGCGGGAAGTTGTTGACCGATTTTCTGACACAACAGAAGATGCTGTCGGCTGCGGAAAATCTGTACAACAAACAAAACAAGTTCCTGGAATTGATGAACACCAACCCGTTAGCGGCGGCCGCCGCAAAAGCAGCGGCAGTCACGGGGACGGGCGTCGATGGATCTAGCGATTTTCAAATGGCCAAAAAGTACAATGCAATGGATCTCTACAAGCAACTGATGGCAGCGAACAATTTCCGACCCGAGGGACTGGACCTGAAAGAAGAACTTAAAAGCGAGCATCAGATAAGCGTTAAGAAACTAGAGACTGAACCGTCGGCTGCATTTCGCAATAGCAATTTTGCGCCAAATATTTCCACGAGGAATTCGTGTAAGACTTTAAAATGTCCCCAGTGCAACTGGCACTATAAGTACCAGGAAACGCTGGAGATTCATATGCGGGAAAAGCATCCAGACGGGGAGACAGCGTGCAGTTACTGCCTAGCAGGACAGCAACATCCGCGGCTCGCTAGAGGCGAATCTTACACCTGCGGTTACAAACCATATCGTTGCGACATCTGTAACTATTCCACCACCACCAAGGGTAACCTGTCTATTCACATGCAGAGCGACAAGCATCTGAATAACATGCAAGACTTGAACGGTATGATGAACAAGGGTAGTCAGAACTTCCTGAATCTTGCGACCCTTCAGGCGACCGAGAAGGTTAACACATCTCGCAACCAATACATGCAATCCACCTCGCCGCTGTCTTTAACCACCAAACTAACCCAGTCTCCCAAAGAATCTCAGCCCAGCAGCTACGAGTCCAGCCGGCCAAAATCTTTCTTCAAATGCGACATCTGCAACTACGACACCAACATAGCGAGGAATCTCCGGATTCACATGACTAGTGAAAAACATATCAGCAACCTCAACTCGCTACAGTCCAGTTACAGCCAGCTGAAAAACCTCCAGAATATGTCCTCCGCCGAAAATCTCGACTATCTGAGCGCCCTGAACCTGAACGCACTGAAGGAAGAATCACCGTTGAGCCGAGTCGAAGACTACAGTAACAGTTCCCTTAAACCTCTTTCGATGGTATCCTCTCCGTTTGCTTCTATCGAATCAACCCCACCGATCAGCACAGCCAACAGTACACCGACTCCGGAGTCCCTGTTCCTGAATAACCCGTCCCCTTTCTCCGGCAGTAGCGATACCGATCGACTTGCGGCCGGTGAGTTCCACCAGCTGGACGAAGACAAGAATCCGCTACACTTCGAACCTCCGATCAGAATCACACTGGATCCATCGACTTACTACACCTGTTTGATTTGTTCGGACTTCGATACCAACAACCTGGAAGAGCTGAAGAAGCACGTGATCAAGGACCGTTTGACATCGAACATTGCAATGGATACAATAGTGATCGCAGCGGCTAGCTGCGAGTGCCTCCTGTGTGGCTTTCGTTCGCAAACCGCGGACAAGCACGACCTCGAACGCCACCTGAAAACGGAAGCTCACCTCAAACGGCTTGATCTGATGATTCATCTGCTCGAAGGACGGGACAAAGCGATCGGCAAGTTGCGCCAGTTTTGCGGTTCCGAACTGTACAAGAAACTCTCGCTGATCTTCCCACTCGCGGAGGAATCGAAATTTCCGTACGAAGAAATGCCAAGCATTGGTGAAATTTCGCGTTCTCCGCTATCGCTGCTGCTGGAACCGAAGACTGAACTGGTCGAACGGGAATTCGGCACCAGCAATGGGATCGATAACGAAGGTTGTCAACCACATCCGGACAATGTGCAAATAAAATGCAACTGCTGCAACTACTACACAACCTCGTTGGAGAAAATCGGCATTCACAGTCTGTCGGAGAAGCACATTTTCCGGCGGATCTGTTTCGACTACTTGCTGCTTATCTCCAGCGAAAAGAATTCCACCGGCGGAGGTTCACTCAGTCCGCTGAATCTGCAGCAGCAACATGGCATGAAAAGTGAAGaaAATCGTCCGGGAAGTGCTGGTAGCGGTCCTCTGCTTCGACCAGGCCATTTGATGCTAACCTGTGTTCCGTGCGGTTACAAGACCGATCATATCTACTACATGATCCACCATCTGCGGAAGTCTTGCAAGGTGGAGCAGAACATCAACCTGCTCGGACTGCGCAACATCTTCAAGTTGACCCCGAAGGGCGCCGATTCCCAGGATGCAATGGACTCGGCCTCGGCGGCTACCGGGGACAACAACAATGGCACAACGGCACTCGGTACACTGTGCAGTATCCTGCAGGAGAAGAAACCGTGGAACGGAGAAAACTGCAACGGGAAAAGCGGTAGTGGTACGACCGGTAACGTCGGTTCGGGTGGCAGCGGTGGCGGCAATGGCGACGGGACTTGTAAGGACCGGTGTTTGGTTTGTAGCGTTTGTAACAATTTCTCGTCGAAGAAGATCAACGTCATGCAGCACCTGTTGGCGAATCACAACGTTGGCAACGAACTTCTGGCCCAGGATTTCTCCAGTATGAGTGTACCTTCCGCAATTCAGAAGAAACCGTTCGATTATCTGCGTACCCTGACCGAGGCCAGGAGTGCCCAAAATCTGCGGTTGATCGAAAAGGTAACCTTTATGAATGACACTTCGGCGTTCAAGGAAAACTGCAACGATCTGAAGCACGGTAATTTGGCGGAGATTCTGGAAACCTACATGGGAGGTGCCGGTGGAAAGGATGGTGGAGAGAAGCAGGAAAAACATCAGGTACAGACGGTGTCCTGTCCGCTGTGCCCGGAAACGTTTCTGGATCAGGTTAACGTGGAGACGCACGTGATCCGAGTTCACAACATTAAGATGGAAGGCTTGAACCGACTGCTGAAGCTGGTTGATACCTCGCAATTTCTAAAGACCACCAAACAACAGCAGCTTGGCAGCAGTCCGGACAAGTCGCCGAAGAAGGAAACCTCACCCTCGCCggaaatcaaatgctccttctgTAAGGTCTGCTTCGACTCGATGGTAGACCTGAAAATACACTGCAACGAAAGTAATCACTTCAAACGGAACGCCGACTCGGAGGATCTCGCTTGCTTCCTGAACGACTGCAAGGACGCATTCGACAATCTCGCCGACCTACATCAGCACTTTAAGGCAAACCATCTCAACTTTCTGATCTCGGAGAATCACACCTACAAATACCGCTGCAAACTGTGCCCGTTCGCTTTCAAAACTCACGAGAAACTCAATCGCCATCTATTTTATCACTCGCTCCGGGAATCGACAAAGTGTTTCTACTGCGATGCCACCTTCAAGAACATCAACTCCCTGACGAGCCACATCACGGAAAAGCATCCGCAGGAATCTACCGCACAGAAGGGCGCAACGGACTCGCAGCAGGAATCTACATCGATTCTTTTCTTCAAGGATTTGAAACGGAAGATGATGAACAACAAGAACGGGATGAGTCCGAAGTCGGATCGAAGTCAGACCCGGGACAGTGCGGACGAAGATCGGCTGAGTGAGAAGTCGATGAGTAGCAAGAGTAGTCtgtactacgataaaagtttggACGGTTCGGATGGTGGCGGAACGGGAGGGGGAGGAAAGCTCTCCTGCATGGATTGTCGATTCAACTTCACCGACACGGCAGCTCTCGAGCGGCATATGGCCACGGCATTCCATATGTCGAAAGAGAAGGAAAAAGCCGCAGCGGACAGCCTGGCCGGTATGGTCAACAAACAGCAGCTGTTCTACGACATCAAATCGGAGAAGTTCACCAACCCGAACCGGCCGTTCAAGTGTACGATCTGTATGGAAAGTTTCACGCAAAAGAACATCCTCCTGGTGCACTACAACAGTGTGTCACATCTGAACAAGCTGAAGAAACTTAAGTCCGacaagcaacagcagcagcagcagcatcagttTCCGTTTCAGATTGGGGCTTCCATGGGAGACGGAGGAGATGGATGCGAACATGGGGACAGACAGTCGATGGATTTCAAACCGTTTGGGCTGCAAATGTTCGGCGAAGGAGGcgagaaaaggaaggatctggAAGAGAAGGAAATGGCTCGGAAGAAATTTAAATGTGACATTTGCAACGTCGCATACACGCAGGGCAGTACGTTGGATATTCACATGCGAAGTGTGCTGCATCAGACCCGAGCATGTAGACTACAGGAAAGAAGCATGTTCAGCAACCAACTGCAACCCGTCGATAGCAAGAAGAAACCTGAATTCTCCCTAATCCATACCATTCCGGAAAGCCACGAATCTCCCAACTTCATCGATGATACCCCGTTACGTAAACTGAAATCCCCGGCTGACCTTCAACAGCAACATCAGCaactacaacaacagcagcagcagcagcaaactATCCAACCGGCACCACTCACTCCACAGCCTCCTATGTTGAATCCGATGATGGGAGCACTGGGCCTTGGAACGGGTGTCGCTGCGATGGAGAAACCGGAAATCGTTATCTGCGAATGCTGTTTCCAGGTGTTCCCCAACAAATCCACTCTGGAGACTCATCTGGAACTGAGTCCGGAGTGTTTGGCTGTCAAGAAAAAACTGTTGGAAGGCAATAATCCAACGCCGGAAAGTTTCGTCGAAAATTTCCAACAACAGCAAGTCTTGAATGACCTCGCCAAGGTAAACCCTTTACCAGGGTTCGATCTTTCGCCGGAAGCACTGCTGGGGAAGAGTCCGTTTCCGCTGGATCCAACTGCAAACCTTATGGATCCCAATTTCTTGAAGAACGCCTCGCTGTTACAGTTCGCAACCGATCCGAACAACAAGCTCGGTCCGAACGCTCTGAACGTTCTGAACTTTATGCACTTTCATCATCTCATGTCCCTTAGCTATCTAAACCTCGCTCCCCAGCTGAACTTTGGTGCTGTACCTCAGAAAGTCCCGGACATGACGGCTAAAAACGACCTGGAAAAAGTCATACCGGTTGATAAGACCAAACTGCCTCCGGGAATGCTACAGTCCAATCTCAACGGGAAACCTCCGCTAGATATGAACATGCTGGCACATAACCTCGAGAACAAAATGCCACCTCAGCCTCCGCAACAGCAACCTTGCACCCAGAAACGCGCTCGAACTCGCATAACCGACGAACAGCTGCGCATTCTACGCTCCCACTTTGATATCAACAATTCGCCCAGTGAAGAAAGCATCCAGGAGATGTCTCTGAAGGCTAACCTTCCACCGAAAGTCGTCAAGCATTGGTTCCGCAATACCCTGTTCAAGGAGCGACAACGTTCCAAGGATAGTCCGTACAATTTTAGTATTCCACCTTCTACGAAGCTCAACGTAGAGGAATACGAACGCACCGGTGAGaccaaggtcgttgatttggacACCTCATTCAAATCTAACGATTCCCAGGACACCTCGCAGAATGCGGTTGATCTGAAGATGAACGAAATGAAGCAGAGTTTCTCCAAATCGCTGATGGAGTCGTTGTCAAAGCATCAGGCGACCCAGGAACTGGGAAACTTCCAGTTGAACAAAAATCTCTTTCCGGACAACTTCGGCAATGACTTCCAAACTCAACATGAGCAAGCCTCCCAACTACAAGCCAATGTAGCTAATTTTTTCTCCCAAGCTCCCGAGCTGAATCTGAACAACCTTGGAAAAGAGCTGATgtcaaacaaaaagaaaaaaatcaaatccgaAAATTCCTCCAACGCTTCCCCGATTCCAGCCGATCTTCAGATCGATTCCAGCAATTCCAGTCCTCTTCCGATGCGCCCACCGAGTGCCATTTCTTTGAAAAAGCATATGGAAGCTCGACCGCTCGGTACTCCCGGTCTGATGGAAGAGATAAAAATTCCCAGCCCCATCGATAGTCCCGTGATTTCTCCACCGTCGTCGATTTCCAGCGGAATGCACCAGCAGATGGCCCAGAATCAAGCGATCACCTGCTCCAACGGGAAACGGGCCAATCGAACTCGGTTCACCGACTACCAGATCAAGGTGCTGCAGGAGTTCTTCGAGAACAACTCGTACCCGAAAGATAGCGATTTGGAGTATTTGAGTAAGCTGTTGATGCTTTCGCCGCGAGTGATCGTCGTGTGGTTCCAGAACGCTCGTCAAAAACAACGCAAAATCTACGAGAACCAACCGAACCCGACCTTCGAAACGGACGAGAAGAAGGCCATCAACATCAACTACACCTGCAAGAAGTGCAACCTGGTTTTCCAGCGGTACTACGAACTGATCCGTCATCAGAAGAACCACTGCTTCAAGGAGGAAAGCAACAAACGATCGGCCAAGGCTCAGCTTGCAGCCGCTCAGATCGCTCATTCCTTCACCAGTGGCAGTGAGGACTCCGATTCCAGCCTGGACGTCAGCCGTCGAGACTTCCAACCGCGTGAGAACGACTGCCCCTTCTAA
Protein Sequence
MASRKNAKFSTKIQFYLKHRESRILKLCNDTIGPVPNDSLTRAIFKLLSKPVDNKRIIQLLADKKRSSTKSTASHSTMKTPQTATPTTTTFTSTAFPGLPLVTGTGTTSSVTVPGTGLGAAVSLPEYQKEVERFRGRIICQDNTCIIDPAASLKNDNNSNPRTHSFRIVSFSKEGGSNGSSSHKASSSSDCSSSPLGGDGGRDSVDEQVRNLGSPLAASTQAGHKAILMCFSCKLSFGTCRSFIAHAKMEHSLTLNDYERMLLEKNYSSAIIQTNTERQFYFLVPFEEKSSANSIPSIKSSVESGEERFKSSISHSLSSGSGGGSQQLSPQQQQVQQIQSSVTTPEKSPGSISFDGGFPKLTPSSMLYDMDNKLQASWKLAAEKYNNAMNESVAAAAAAAAVAAAQEEKNAASGKLLTDFLTQQKMLSAAENLYNKQNKFLELMNTNPLAAAAAKAAAVTGTGVDGSSDFQMAKKYNAMDLYKQLMAANNFRPEGLDLKEELKSEHQISVKKLETEPSAAFRNSNFAPNISTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGETACSYCLAGQQHPRLARGESYTCGYKPYRCDICNYSTTTKGNLSIHMQSDKHLNNMQDLNGMMNKGSQNFLNLATLQATEKVNTSRNQYMQSTSPLSLTTKLTQSPKESQPSSYESSRPKSFFKCDICNYDTNIARNLRIHMTSEKHISNLNSLQSSYSQLKNLQNMSSAENLDYLSALNLNALKEESPLSRVEDYSNSSLKPLSMVSSPFASIESTPPISTANSTPTPESLFLNNPSPFSGSSDTDRLAAGEFHQLDEDKNPLHFEPPIRITLDPSTYYTCLICSDFDTNNLEELKKHVIKDRLTSNIAMDTIVIAAASCECLLCGFRSQTADKHDLERHLKTEAHLKRLDLMIHLLEGRDKAIGKLRQFCGSELYKKLSLIFPLAEESKFPYEEMPSIGEISRSPLSLLLEPKTELVEREFGTSNGIDNEGCQPHPDNVQIKCNCCNYYTTSLEKIGIHSLSEKHIFRRICFDYLLLISSEKNSTGGGSLSPLNLQQQHGMKSEENRPGSAGSGPLLRPGHLMLTCVPCGYKTDHIYYMIHHLRKSCKVEQNINLLGLRNIFKLTPKGADSQDAMDSASAATGDNNNGTTALGTLCSILQEKKPWNGENCNGKSGSGTTGNVGSGGSGGGNGDGTCKDRCLVCSVCNNFSSKKINVMQHLLANHNVGNELLAQDFSSMSVPSAIQKKPFDYLRTLTEARSAQNLRLIEKVTFMNDTSAFKENCNDLKHGNLAEILETYMGGAGGKDGGEKQEKHQVQTVSCPLCPETFLDQVNVETHVIRVHNIKMEGLNRLLKLVDTSQFLKTTKQQQLGSSPDKSPKKETSPSPEIKCSFCKVCFDSMVDLKIHCNESNHFKRNADSEDLACFLNDCKDAFDNLADLHQHFKANHLNFLISENHTYKYRCKLCPFAFKTHEKLNRHLFYHSLRESTKCFYCDATFKNINSLTSHITEKHPQESTAQKGATDSQQESTSILFFKDLKRKMMNNKNGMSPKSDRSQTRDSADEDRLSEKSMSSKSSLYYDKSLDGSDGGGTGGGGKLSCMDCRFNFTDTAALERHMATAFHMSKEKEKAAADSLAGMVNKQQLFYDIKSEKFTNPNRPFKCTICMESFTQKNILLVHYNSVSHLNKLKKLKSDKQQQQQQHQFPFQIGASMGDGGDGCEHGDRQSMDFKPFGLQMFGEGGEKRKDLEEKEMARKKFKCDICNVAYTQGSTLDIHMRSVLHQTRACRLQERSMFSNQLQPVDSKKKPEFSLIHTIPESHESPNFIDDTPLRKLKSPADLQQQHQQLQQQQQQQQTIQPAPLTPQPPMLNPMMGALGLGTGVAAMEKPEIVICECCFQVFPNKSTLETHLELSPECLAVKKKLLEGNNPTPESFVENFQQQQVLNDLAKVNPLPGFDLSPEALLGKSPFPLDPTANLMDPNFLKNASLLQFATDPNNKLGPNALNVLNFMHFHHLMSLSYLNLAPQLNFGAVPQKVPDMTAKNDLEKVIPVDKTKLPPGMLQSNLNGKPPLDMNMLAHNLENKMPPQPPQQQPCTQKRARTRITDEQLRILRSHFDINNSPSEESIQEMSLKANLPPKVVKHWFRNTLFKERQRSKDSPYNFSIPPSTKLNVEEYERTGETKVVDLDTSFKSNDSQDTSQNAVDLKMNEMKQSFSKSLMESLSKHQATQELGNFQLNKNLFPDNFGNDFQTQHEQASQLQANVANFFSQAPELNLNNLGKELMSNKKKKIKSENSSNASPIPADLQIDSSNSSPLPMRPPSAISLKKHMEARPLGTPGLMEEIKIPSPIDSPVISPPSSISSGMHQQMAQNQAITCSNGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLMLSPRVIVVWFQNARQKQRKIYENQPNPTFETDEKKAININYTCKKCNLVFQRYYELIRHQKNHCFKEESNKRSAKAQLAAAQIAHSFTSGSEDSDSSLDVSRRDFQPRENDCPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2