Wsmi009059.1
Basic Information
- Insect
- Wyeomyia smithii
- Gene Symbol
- -
- Assembly
- GCA_029784165.1
- Location
- CM056644.1:107035548-107036393[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-09 2e-06 29.1 0.1 3 43 13 52 11 53 0.87
Sequence Information
- Coding Sequence
- ATGAGTAACGCGGCAGTGAAACGTGGTGAACGGGAGCAGGCGATCAAGTTGGCGATTATTGCCATTAAGTTTGGCAAGTCGTTACGGGCAGCTGCTGGAGAGTATGGTATACCCCGTACCACCTTGCTTCGCCACAAGCGGTTAAACGCTGGCCTGATGGTGCAAGCGGACCCGCTACATCCTACGATATCGATGGaggatgtgcaaatttgtaagCGCGGAAGACCACCGTTTTTCCCCGAGGAACCAGAACGGGCATTCGAAAAAGACATTCGTGTGCTTGCACCACAATTCGCGAACCAGCTGGGGATTCCGGTTCCCGACAATTGGATCGCGAACGCAAAGGCAGGCCCTGTTTGGTTTCGGAACTTTCTGCGCCGAAGGCCGAACCTGTCGATGCGTTCACCCGAGGCGACCAGCATAGCCAGAGTCTCTGCTTTTAATCCCACAAATGTGGGCAAGTTTTTCGATCTTCTACGCACAGTAGCCGAGAATATAACGTTCGAACCAAATTCCATCTGGAATCTGGACGAGACTGGAGTGACAACAGTTCAGAAACCTCAACGAGTTGCTAGTCGCCGTGGAGTCAAACGTGTTGGTCGAGTAACTTCGGCCGATCGGGGCCCGTTGGTTACGATGGTACTTGCGGTTTCCGCCACTGGCAATAAAATGccaccatttttcgtttttcctcgAAAACGTTTCCATCCACACTTTCTGGATGGTGGTCCAACGGGATGCGCTGGAGCGGTGAGCAATACAGGGTGGATGAATGCAGATATTTATCTGGATGTTCTCTGA
- Protein Sequence
- MSNAAVKRGEREQAIKLAIIAIKFGKSLRAAAGEYGIPRTTLLRHKRLNAGLMVQADPLHPTISMEDVQICKRGRPPFFPEEPERAFEKDIRVLAPQFANQLGIPVPDNWIANAKAGPVWFRNFLRRRPNLSMRSPEATSIARVSAFNPTNVGKFFDLLRTVAENITFEPNSIWNLDETGVTTVQKPQRVASRRGVKRVGRVTSADRGPLVTMVLAVSATGNKMPPFFVFPRKRFHPHFLDGGPTGCAGAVSNTGWMNADIYLDVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01524714; iTF_01524647; iTF_01524649; iTF_01524658; iTF_01524662; iTF_01524663;
- 90% Identity
- iTF_01524658;
- 80% Identity
- -