Basic Information

Insect: Wiebesia pumilae
Gene Symbol: -
Assembly: GCA_018907045.1
Location: JACCHZ010000044.1:1701855-1716534[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 5.1e-06 0.0013 20.5 1.0 1 23 181 203 181 203 0.98

2 30 0.0022 0.56 12.2 1.9 1 23 226 249 226 249 0.96

3 30 0.00011 0.028 16.3 0.5 2 23 256 278 255 278 0.96

4 30 0.0006 0.15 14.0 0.9 1 21 298 318 298 319 0.94

5 30 0.0082 2.1 10.4 0.0 2 23 428 449 427 449 0.96

6 30 0.012 3 9.9 0.3 1 23 455 478 455 478 0.91

7 30 9.6e-05 0.025 16.5 0.1 1 23 547 570 547 570 0.96

8 30 0.0065 1.7 10.7 0.4 1 23 576 599 576 599 0.96

9 30 0.098 25 7.0 1.5 1 23 612 634 612 634 0.97

10 30 2.9e-05 0.0074 18.1 0.9 3 23 678 699 677 699 0.96

11 30 0.81 2.1e+02 4.1 0.9 2 23 762 785 761 785 0.93

12 30 2.5 6.5e+02 2.6 0.0 2 23 794 816 794 816 0.84

13 30 0.16 42 6.3 0.1 2 23 823 845 822 845 0.93

14 30 1.1e-05 0.0027 19.5 1.2 1 23 853 875 853 875 0.98

15 30 0.00017 0.044 15.7 3.3 1 23 952 975 952 975 0.97

16 30 0.014 3.5 9.7 0.5 2 23 982 1004 981 1004 0.95

17 30 0.00058 0.15 14.1 4.8 1 21 1038 1058 1038 1059 0.94

18 30 0.0022 0.56 12.2 1.8 2 23 1073 1094 1072 1095 0.93

19 30 0.65 1.7e+02 4.5 2.6 1 23 1098 1120 1098 1121 0.95

20 30 0.0064 1.6 10.8 0.9 2 23 1128 1151 1127 1151 0.93

21 30 0.78 2e+02 4.2 0.2 2 23 1159 1181 1159 1181 0.95

22 30 3 7.6e+02 2.4 0.0 2 23 1188 1210 1187 1210 0.87

23 30 0.18 47 6.2 2.7 2 23 1219 1241 1219 1241 0.96

24 30 0.21 55 6.0 0.8 2 23 1247 1269 1247 1269 0.93

25 30 0.034 8.7 8.5 0.3 1 23 1336 1359 1336 1359 0.96

26 30 0.01 2.7 10.1 2.0 1 21 1388 1408 1388 1409 0.93

27 30 0.26 67 5.7 1.9 2 23 1497 1519 1496 1519 0.94

28 30 3.3 8.5e+02 2.2 0.9 2 21 1526 1545 1525 1548 0.94

29 30 0.14 35 6.6 1.8 1 23 1559 1581 1559 1581 0.97

30 30 0.039 10 8.3 0.2 2 20 1589 1607 1588 1608 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	5.1e-06	0.0013	20.5	1.0	1	23	181	203	181	203	0.98
2	30	0.0022	0.56	12.2	1.9	1	23	226	249	226	249	0.96
3	30	0.00011	0.028	16.3	0.5	2	23	256	278	255	278	0.96
4	30	0.0006	0.15	14.0	0.9	1	21	298	318	298	319	0.94
5	30	0.0082	2.1	10.4	0.0	2	23	428	449	427	449	0.96
6	30	0.012	3	9.9	0.3	1	23	455	478	455	478	0.91
7	30	9.6e-05	0.025	16.5	0.1	1	23	547	570	547	570	0.96
8	30	0.0065	1.7	10.7	0.4	1	23	576	599	576	599	0.96
9	30	0.098	25	7.0	1.5	1	23	612	634	612	634	0.97
10	30	2.9e-05	0.0074	18.1	0.9	3	23	678	699	677	699	0.96
11	30	0.81	2.1e+02	4.1	0.9	2	23	762	785	761	785	0.93
12	30	2.5	6.5e+02	2.6	0.0	2	23	794	816	794	816	0.84
13	30	0.16	42	6.3	0.1	2	23	823	845	822	845	0.93
14	30	1.1e-05	0.0027	19.5	1.2	1	23	853	875	853	875	0.98
15	30	0.00017	0.044	15.7	3.3	1	23	952	975	952	975	0.97
16	30	0.014	3.5	9.7	0.5	2	23	982	1004	981	1004	0.95
17	30	0.00058	0.15	14.1	4.8	1	21	1038	1058	1038	1059	0.94
18	30	0.0022	0.56	12.2	1.8	2	23	1073	1094	1072	1095	0.93
19	30	0.65	1.7e+02	4.5	2.6	1	23	1098	1120	1098	1121	0.95
20	30	0.0064	1.6	10.8	0.9	2	23	1128	1151	1127	1151	0.93
21	30	0.78	2e+02	4.2	0.2	2	23	1159	1181	1159	1181	0.95
22	30	3	7.6e+02	2.4	0.0	2	23	1188	1210	1187	1210	0.87
23	30	0.18	47	6.2	2.7	2	23	1219	1241	1219	1241	0.96
24	30	0.21	55	6.0	0.8	2	23	1247	1269	1247	1269	0.93
25	30	0.034	8.7	8.5	0.3	1	23	1336	1359	1336	1359	0.96
26	30	0.01	2.7	10.1	2.0	1	21	1388	1408	1388	1409	0.93
27	30	0.26	67	5.7	1.9	2	23	1497	1519	1496	1519	0.94
28	30	3.3	8.5e+02	2.2	0.9	2	21	1526	1545	1525	1548	0.94
29	30	0.14	35	6.6	1.8	1	23	1559	1581	1559	1581	0.97
30	30	0.039	10	8.3	0.2	2	20	1589	1607	1588	1608	0.94

Sequence Information

Coding Sequence: ATGTTACAGATAGCAGAAGATGACAGATTGCCGAAATGCCTTTGCTATAGATGCATGTACAATTTGGAGAACTTCTACGACTTTAGAACGGCTTGCGTTAATGCGGTCGCTCTACTGGAAAGATGTTTACCACCGGAAGGGGCAAAGCCGGAGATCAAACAGGAGGGTGAGGATATCGAGCCATACTCTGAGCTACGCATGGAGCTGTTAAAGGAGAAGGAGAGTATGCCAATGCTCATCCCCGAGGCACCCGTCGTCAATCCAAACGCAGCCCTTGGCACCCCGCCGAGACTCATGTCCGACGGGGAGCACGAGCACGAGATGGAGGACCTCGTCCACGAGCATGACATGGGCGACGAGCGACTGGACGATCAGGATGATCACAAGTCGGACGAGTACGAGATGGACATGGAGACAAACCCGAGCGATTTTTTGGAGATGAGCGCGATGGTGCCGGAGGAGGAGCACGTGCTACCCCAGGGCCTCGGTCACCAGCAGGATACGGGCGTCTTCCAGCACCGCAACGAGCAGCACGAGGTGTACGTGTGCTCGCTCTGCAACAAGGCCTTTAGTTCCAAGGGCCATTTGTCGCTCCACGCTCGGATACACGTAGGCGCGGGCGACGTCATCGGTGAGAAGGTCATCACGGACGATCATACTTCCTACAAGAGGCCCTATCAGTGCGACCTATGTAACAAATCCTACTCGACGGCTAAGCATCGCTGGGGACACGTGTCCACGACACATCGGGGCCATCCGGCAGTGACGTGCGGTTATTGCTCGCGCATCTATTCGACGCGCACGAATCTCGAGGAGCACATAAAGTCGCGTCATGCGGGTTTACCGCCACCACCAGAAATGCCGGTTCCCTACATTCAGCCAGACTCGCGCCACCAGTGCAAGACCTGCCCGAAGATGTACACCAACATCACGGATCTCAACAAACACAGCAGAGTCTGCCTGGGTGAGCAACAGCGCAAGGAGATGGCTAATAACAGCCTAAACTCACAGAACTTTGTTAAGAAAAATACTAGGTCAAAACTTAAAAATGCATTGGATCCAACTTCAGATTTATCCAGTATTGATTCAGATTATGAAAACAAAGATTATAAAAGTGCTGAAGCAAAACTTGCCAAAAATCCTCAATTAACTATTCTTAAGCAAGCTCTTATCAAGGGTGAGAGTGTAAAAAAGGAATACGAGGAAAGGCAGAAAATGTTAAGCAAAGCAAAAAAGCAAGCAACCAATAAAGAAGGGAGTAATTCGGATGCAAAGAGATGGTACTGCGAAGTGTGTCCCCTGAACTTTGCAGCCGCCGATGACCTGAGGCAGCACGAGAAAAGTCACGATGCCGATAAGCCTTATATATGCATTTTGTGCGAGAAAGACTTTGTTTTAAAGTCGTCTTTAAGCAGGCATATACTTTCATCTCATGGCGTTGATCCGACGCCTCTAGTTGAGAGTGATAAGTGTTTGAAAAAGTCGATGCAAGATGCGAATGTACAACCGCTCGTGATAAAAGAGGAACAAAACATTACCAAAGAAAATTCTACATCGCCATTTTCTCCTGATAATATGGAAAATGACGATGACGAGCAAGAAAACGGAAACGAGAATATGCTTGAAATAGAAACAGTTTTTGTTTGTGAAATCTGTACGCGAGATTTCAACGATCGAGCGTCACTTTGGTTACACATTCGAGCCACTCACAAAGAATATGCGGCATTTGCCTGTGGAGTTTGCCTAAAAATTTGTTCGGATAATGCACAATTATTAAATCATGTCAATATGTATCACGGAGGTTCAAAACTTTTAATGTCCGAACAAAGAAGGTATAGCTGTACGATATGTGGAAGACAGCATGATTCGCGTAAAAAACTTATAACGCACGTGTCAATTCACAATGTCGATCCGGGTTATGACCCCGCCAGCTTTGTACAATTAAATACTAACTATTATAACGAGAACGTCAACAGTAACGAAGGAAATGACTTGATTATGGACTGTGATGATGAAAATGAAAAGGTCGACTGTTACATTTGCTATAAATCATTCCCAAATGAAGATCACCTCATACGCCATCAAAGAAACGCTCACAAGACTGAGCAGATGGTTCAAATAAGTGAATTTGGTGGGAACGGAGCTGCTGCCGGACAAAATGGAACTGGCAATCGAGCTCAATACCACCTTTTCTTCGTGTGCGAGCTTTGTGGAAGCTCTCATCCGAGTAAGTGGGAACGCTGGCTTCACGTCAGTAGTATGCACAACAACGAGCCTTCCATCAAGTGCGAACGCGACGACTGCGCCAAGATTTTCGCCACCAAAACCCTGCGCAACGAGCACGCGCAACATCATCAGCTCCAGGGCAGTTCACCCAACACCTGCGAAATCTGCGGCAAGCTCTGGGGTAGTCGAGTCGACTATTGGAAGCACGTGATGGGTGTGCACTCCGACACGGTTCCCCTCATCTGCGGCGTTTGCCTCAAGGTTTTCCCGGACGTGTTGCAACTTAGCCAGCACGTAAAACTAAAACACTGGCCACTCACCAACGGAGACTTCAGTTGCGACATATGCGGCAGGCCGTACTCGAATAAAAGTAAGATGTCGAGGCACAGGAAGATTCACGGCCTTGATGGGGAGGTGTACAATCCCGCAGCTACCAATAGCAGTTTGATAATTAATGATGCTTCAATGAATGACATACCCGGTTTACCGATTCCTCTGCAACTAGATAACGGTTTACCACAGCCCGTGGAGCCGTCCTCGCTCGATCTGAGCTGCGAGATGTGCGGCGATCTTAAGTTCCCTTGCTTGGAGGATCTATGCAATCATCGACGCATTGCTCACAGCCTCTTTCCCTGTGACCTCTGCAATAAGTGCTACGGGCGCACTTCGCATCTTTGGAAGCACGTAAATCGTGTGCACAAGGGACACGAGGACGTTACTTGTCGGTTCTGCCTCAAAACAAGCGCCTCCAAGGATCACCTCGCAGCCCACATCGCCAAAATACACCGATACGAGCCCGAGCTTAAAAGTGAAGTCAGAGATGCGATGAGCTACAAAAGTAGTAGTTATAATGCCGCTGCAGCTGCAGCCGAGGATGACGTTCTCCACTTTTGCGAGAAGTGCAATAAATCCTTTCACAAGAGGTACCTGTTGCGTCGTCACATGAAGGGTTGTCAGAATTACCGGAAGGATCCGGGCGCATTGTTGACGCGCTGTAGAGCCTGCGAGCGCATCTTCAAGGATCGCGCGAGCTTGCAAAAACACATCGAAAACCACCACAGCTCTTACGAGTGTCATCTGTGCAAGGAGACGATAACGTCGAAGCTAGGCATAATGACGCACAACCGCGTACACCACATGCTTCATCCCGACCTGACCTGCGAGCTCGAGAATTGCCGCAAGTTATTCAGGACGAAGGAGGACTTGGAGTCCCATCGCAAGGATCACAAACACCACGGCAGTCCGAACGTTTGTGATTTTTGTGGAGATACGGTAGAGAACAAGCTCAAGCTTAAAATGCACATACTGAGTTTACATAGAAACGAGATTGGCGTTTCTTGTGGAGTTTGCCTGATTCCTATGAAGGACCCCAAGGATCTTAAAAAACACGTGGAGGATGTTCACGAAAGTGTACTGTTGAAACCGAATACTTGTCAGGTTTGTGGTAAACAGTACGCATCTAAGTGGAAGGCATTTGACCACACGAAGAAGTGCCATGGCAAGGTGTTCCGCACTTGCAAGCAGTGTCTTGCTGTGTTCACCTCTGACGAGGACCTGCGCTACCATTACGAGCACATACATAACATTCCTAAAGACCAGCTGGATGCGTTCCAGTACCGACTGGAGGTGGCCGGTAGCAAGATGGATGATTACGATCTCGGGCCTCTCGAGGTTGTCGTAAAGGAGGAGCCCGAGGAGCTGGACTTCGACATGGAGCCCTTCGACGAGGACAACTGCAACTCGAACGATTCAAAAAGGCGTCGTTCTATCGGTGACACCTATGACTGCGAGATATGCCCCGAAATATTCCTCAACCACGAGCTATTGTCCTCTCACTACCGCAACGTCCATAACACCGATCCCACGAGGATGTTCAAGAAAATGCGCCTCGAGCCCGCGGCTAAGGCCAAAAAGAAAACGCGCGATCGTGAGAATTACGAGTGTAAGAATTGCCAGAAGCAGTTCTGTACCAAGACGCTCTACCTTGGACACATTAGCGTGTGCACGCGCAGGTCGACCTCGATCCTCGAGGCGCACCTCAAGAACAACAACCAGGTAAAACGCGAGGAACCCGAGTCCGTACTCTGCGAGACCAACCTCAACATCCCGGACTTCAACCTGTTCGAGGACATCAACATGCAGCTGTCGGGACAGAAGCCGGTGCCGAGTCTCATGCCCCTCGGCCACTCGTCCTCCAAGTCCTCCAAGTACTCGAGGAAGGACTCGCGTAAGGTGTACGACGAGTCGACCAACACCGAGTGTACCTGCGAGGTTTGCGGCAAGCAGTGGCCCGCCAAAAAGCATCTTTGGCAGCACCTTATCCGCTTCCACAGGGCCGAGGCCGCTGTCACGTGCGGTGTCTGCCTCAAGCTTTGCGCCACGTACGAGGACCTCGCGGAGCACCTCAGGTGTGCCCATCCTGCCATCCTCTCGACCGCGGGCAATAACTTCACCTGCAAAATATGCGGCCGTTACCACAATGCTCGGAGCAAGCTCTTGCTGCACATGAGCATTCACATCAACTGCGCGGCCAACTCCATGTGTCAGCGCTGCAACAGGAGCTTCGAGAACGACGAAAAATTGAAGGAGCACATCGGTGCCTGCCTCGGGGCCCAAGGCGAAGACCTTGGGGACGACGACGACGAGGAGGAGGAAGTCGAGAGCGTCGAGGACAAGACGAGATATGAGGCCATGTCCGAATCCGAGGATGATAGCTATGACAAAAAGAAGAGCGAGACCGTACTCGTCAACTATTCGGACGATGAGGGTGTCACGGCTCTGAGCACAATGATACCGATGGACATGAAGGAGGGCAGCAGTGAGCACCAAGAGGACGACAGTCAGGATGAGCTGAGCGCCCGGCGTCGCACTCTTAGCAACTCCTTGAGTTCGAAGAAAGAGAAGAGCGAGGAGAGCGAGGATGATAGCAGCGAGGTTGAAATGGAAGAGGAGGAGGTTGAGGCTGAAGCCTCCGAGGAAGAGGAAGAGGTGCAACAAGCCGAGATCGTTGATCCCAATAGCGCCTTTCACGCAGATAACAACTCGAGGAGCAGTAATGAAGGTATTTTACGTTGTCAAAATTCTGAAAATAAAATGCTAAGGATTAAAGAGGTATTCAGGGTCCCAAGCATGAGAGGTTTTTAA
Protein Sequence: MLQIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPEGAKPEIKQEGEDIEPYSELRMELLKEKESMPMLIPEAPVVNPNAALGTPPRLMSDGEHEHEMEDLVHEHDMGDERLDDQDDHKSDEYEMDMETNPSDFLEMSAMVPEEEHVLPQGLGHQQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPEMPVPYIQPDSRHQCKTCPKMYTNITDLNKHSRVCLGEQQRKEMANNSLNSQNFVKKNTRSKLKNALDPTSDLSSIDSDYENKDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQATNKEGSNSDAKRWYCEVCPLNFAAADDLRQHEKSHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPTPLVESDKCLKKSMQDANVQPLVIKEEQNITKENSTSPFSPDNMENDDDEQENGNENMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNTNYYNENVNSNEGNDLIMDCDDENEKVDCYICYKSFPNEDHLIRHQRNAHKTEQMVQISEFGGNGAAAGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSMHNNEPSIKCERDDCAKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEVYNPAATNSSLIINDASMNDIPGLPIPLQLDNGLPQPVEPSSLDLSCEMCGDLKFPCLEDLCNHRRIAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHLAAHIAKIHRYEPELKSEVRDAMSYKSSSYNAAAAAAEDDVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMLHPDLTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGSKMDDYDLGPLEVVVKEEPEELDFDMEPFDEDNCNSNDSKRRRSIGDTYDCEICPEIFLNHELLSSHYRNVHNTDPTRMFKKMRLEPAAKAKKKTRDRENYECKNCQKQFCTKTLYLGHISVCTRRSTSILEAHLKNNNQVKREEPESVLCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYEDLAEHLRCAHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCAANSMCQRCNRSFENDEKLKEHIGACLGAQGEDLGDDDDEEEEVESVEDKTRYEAMSESEDDSYDKKKSETVLVNYSDDEGVTALSTMIPMDMKEGSSEHQEDDSQDELSARRRTLSNSLSSKKEKSEESEDDSSEVEMEEEEVEAEASEEEEEVQQAEIVDPNSAFHADNNSRSSNEGILRCQNSENKMLRIKEVFRVPSMRGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00305159;
90% Identity: iTF_00464130; iTF_01216954;
80% Identity: -