Cfus006762.1
Basic Information
- Insect
- Ceratosolen fusciceps
- Gene Symbol
- -
- Assembly
- GCA_018883505.1
- Location
- RCIC01000003.1:2767510-2783566[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 5.5e-06 0.00056 20.3 1.0 1 23 254 276 254 276 0.98 2 30 0.0024 0.24 12.1 1.9 1 23 299 322 299 322 0.96 3 30 0.00012 0.012 16.2 0.5 2 23 329 351 328 351 0.96 4 30 0.00064 0.065 13.8 0.9 1 21 371 391 371 392 0.94 5 30 0.037 3.8 8.3 0.0 5 23 500 518 499 518 0.95 6 30 0.013 1.3 9.7 0.3 1 23 524 547 524 547 0.91 7 30 0.0001 0.011 16.3 0.1 1 23 615 638 615 638 0.96 8 30 0.007 0.72 10.6 0.4 1 23 644 667 644 667 0.96 9 30 0.11 11 6.9 1.5 1 23 680 702 680 702 0.97 10 30 3.1e-05 0.0032 18.0 0.9 3 23 746 767 745 767 0.96 11 30 0.87 89 4.0 0.9 2 23 830 853 829 853 0.93 12 30 2.7 2.8e+02 2.4 0.0 2 23 862 884 862 884 0.84 13 30 0.01 1 10.0 0.2 2 23 891 913 890 913 0.95 14 30 2e-05 0.0021 18.5 1.2 1 23 921 943 921 943 0.98 15 30 0.00018 0.019 15.5 3.3 1 23 1035 1058 1035 1058 0.97 16 30 0.015 1.5 9.6 0.5 2 23 1065 1087 1064 1087 0.95 17 30 0.00062 0.063 13.9 4.8 1 21 1135 1155 1135 1156 0.94 18 30 0.0024 0.24 12.1 1.8 2 23 1170 1191 1169 1192 0.93 19 30 0.7 71 4.3 2.6 1 23 1195 1217 1195 1218 0.95 20 30 0.007 0.71 10.6 0.9 2 23 1225 1248 1224 1248 0.93 21 30 0.84 86 4.0 0.2 2 23 1256 1278 1256 1278 0.95 22 30 3.2 3.2e+02 2.2 0.0 2 23 1285 1307 1284 1307 0.87 23 30 0.2 20 6.0 2.7 2 23 1316 1338 1316 1338 0.96 24 30 0.23 23 5.8 0.8 2 23 1344 1366 1344 1366 0.93 25 30 0.037 3.7 8.3 0.3 1 23 1433 1456 1433 1456 0.96 26 30 0.011 1.1 9.9 2.0 1 21 1485 1505 1485 1506 0.93 27 30 0.28 29 5.5 1.9 2 23 1594 1616 1593 1616 0.94 28 30 3.6 3.6e+02 2.0 0.9 2 21 1623 1642 1622 1645 0.94 29 30 0.15 15 6.4 1.8 1 23 1656 1678 1656 1678 0.97 30 30 0.033 3.4 8.5 0.1 2 20 1686 1704 1685 1706 0.93
Sequence Information
- Coding Sequence
- ATGGTCCTGAGCTGGGTATCCATAGGACGAGCACCGCGCCCCGAGCGAAACCAGCCTCCGTCGCCTCGCCACGAGCTCGTCGTTGTCCCCGCCTCGTCCACGTACGTACCAACGGCACCGCTGCTCCTGCTACTCCCGACGCCGCTGCCGCTGGTCGTTAGTGGACGGGGCGAGCGGTCGGCGCCCTTCTCCTTGAATCTCTCCTTCTTCTTACTTATAGCGGAGGATGACAGATTGCCGAAATGCCTTTGTTATAGATGCATGTACAATTTGGAGAACTTCTACGACTTTAGAACGGCCTGCGTCAATGCGGTCGCTTTACTGGAGAGATGTCTACCACCGGAAGAGGCGAAGGCGCAGATAAAGCAAGAGGGTGAGGATGTCGAGCCGTACTCGGAGCTGCGTATGGAGCTGCTGAAGGAGAAGAACATGCCGATGCTCATCCCCGAGGCGTCCGTCGTCAATCCAAACGCAGCCCTCGGCACCCCACCGAGACTCATGTCCGACGGGGAACAGGAACCTGACATGGAGGACCTCACCCACGAGCATGACATGGGTGACGGACGACTGGACGACCAGGACGACCAGGACGATCAGAAATCGGACGAGTACGAGATGGACATGGAGACGAACCCGAGCGACTTCCTGGAGATGAGCGCCTTGGTCCCTGAGGAGGAGAATGTTATGTCTCAGAGCCAAGTACACGGACACCAGCAGGACACGGGCGTCTTCCAGCATCGCAACGAGCAGCACGAGGTTTACGTCTGCTCGCTCTGCAACAAAGCCTTTAGCTCCAAGGGACACCTGTCGCTCCACGCACGGATACACGTAGGCGCCGGCGACGTCATCGGCGAGAAGGTCATCACGGACGATCACACCTCCTACAAGAGGCCGTACCAGTGTGACCTATGTAACAAGTCCTACTCCACGGCTAAGCATCGCTGGGGACACGTGTCCACGACGCATCGGGGTCACCCGGCGGTAACGTGCGGCTACTGTTCGCGCATCTACTCGACGCGCACCAATCTCGAGGAACATATAAAGTCGAGACACGCGGGTTTACCGCCGCCCCCAGAAATGCCGATCCCCTACGTCCAGCCAGACTCTCGGCACCAGTGCAAAACCTGTCCGAAGATGTACACCAACATCACGGACCTGAACAAGCACAGCCGAGTCTGTCTGGGCGAGCAACAGCGTAAGGAGATGGTCAATAATAGCATGAACTCCCAGAACTTCGCAAAACTGAAAAATGCATTGGAACAAAATTCGGATTTATCCAGTATCGATTCAGATTATGAGAATAAGGATTATAAAAGTGCCGAAGCAAAGCTTGCAAAAAATCCTCAATTAACTATTCTTAAGCAAGCACTTATCAAGGGTGAGAGTGTAAAAAAGGAATACGAAGAGAGGCAGAAAATGTTGAGCAAAGCGAAAAAACAAGCCAATATGTCCATTAAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTTGTCCCTTGAACTTTGCGACCGCGGATGATCTGAGGCAACACGAGAAGAGTCACGACGCCGACAAGCCTTATATATGCATTTTGTGCGAGAAAGACTTTGTCTTGAAGTCATCTTTAAGCAGGCATATCCTCTCCTCCCACGGGGTGGATCCGACACCACTGATCGAGAGTGATAAATGCTTGAAGAAGTCGATGCAGGATGCGAATGTCCAGTCACTCGCTATAAAAGAGGAACAAAACATTACCAAAGAAAATTCTACATCGCCATTTTCCCCTGATATTATGGAGAATGACGAGGACGAGCAGGAGAACGGGAACGACATGCTCGAAATAGAGACGGTTTTCGTTTGTGAAATATGCACGCGTGACTTTAACGACCGAGCATCGCTTTGGCTGCACATTCGGGCCACTCACAAGGAATACGCGGCCTTCGCCTGCGGAGTCTGTCTGAAGATATGCTCGGACAATGCACAATTACTAAATCACGTGAATATGTACCACGGCGGCTCGAAGCTCTTGATGTCCGAGCAGAGAAGGTATAGTTGTACGATATGTGGAAGGCAGCACGACTCGCGCAAAAAGCTTATAACACACGTGTCGATTCACAACGTCGACCCGGGTTACGATCCGGCGAGCTTCGTCCAATTAAACACGAATTATTACAACGAGAACGTGAACAGTAACGAGGGGAACGATCTTATAATGGACTGCGACGACGAGAGCGAGAAGGTCGATTGCTACATCTGTTACAAATCCTTCCCGAACGAAGACCACTTGATACGCCATCAAAGGAACGCCCACAAGTCCGAGCAGTTGATTCAGATGGGGGAGTTTGGGGGTAACGGGGCCGCGGCCGGTCAGAACGGGACCGGGATTCGGGCCCAGTATCATCTCTTCTTCGTCTGCGAACTCTGCGGCAGCTCGCATCCTAGCAAGTGGGAGCGGTGGCTCCACGTTAGCAGCATGCACGGCAACGAGTCTTCGATAAAATGCGAGCGCGACGACTGCGCCAAGATCTTCGCGACAAAGACCTTAAGGAACGAGCACGCCCAGCACCACCAGCTACAGGGCAGCTCGCCCAATACCTGCGAGATATGCGGCAAGCTCTGGGGCAGTCGCGTCGATTACTGGAAGCACGTGATGGGCGTCCACTCGGACACGGTCCCGCTTATATGCGGCGTCTGCCTCAAGGTCTTTCCCGACGTCCACCAGCTAAGTCAGCATGTCAAGGTCAAGCACTGGCCCCTGACCAACGGGGACTTTAGCTGCGATGTATGCGGCAGGCCATACTCGAACAAGAGCAAGATGTCCAGGCATCGTAAGATTCATGGCCTCGACGGGGAAGTTTACAACCCCGCCGCGACCAACAGCAGTCTCATTATCAATGACGCCTCGATGAACGATGCTTCCGGAAGTATTTACGCAATAACGATTTCAGATTCTTACGAAAATTCCGGGCTACCGATACCGTTACAACTTGATAACGGGCTGCCACAGCCGATAGAGCCGGCCACGGCCGAGCTCAGCTGCGAGATGTGCGGCGACCTCAAGTTCCCTTGCCTCGAGGATCTCTGTAATCATCGGCGCATGGCCCACAGCCTCTTCCCCTGCGACCTCTGCAACAAATGCTACGGGCGCACGTCCCACCTATGGAAGCACGTGAACCGCGTGCACAAGGGCCACGAGGACGTCACCTGCCGCTTCTGTCTGAAGACGAGTGCCTCCAAGGACCACCTCGCGGCACACATCGCCAAGATACATCGGTACGAGCCGGAGCTCAAGAACGAGATCAGGGACACGATGAGCTACAAGAGCAGCGGTTACAATGCTGCCTCGGCAGCCGCGGCCGCGGCCGCGGCAGCAGCAGCAGCGGCCGCCGCCGCTGCCGAGGACGACGTTCTGCACTTCTGCGAAAAGTGCAACAAGTCCTTTCACAAGAGGTACCTGCTGCGCCGTCACATGAAAGGCTGCCAAAATTACCGAAAGGACCCGGGCGCCCTGCTGACGCGCTGTCGCGCCTGCGAGCGCATATTCAAGGACCGGGCGAGCCTGCAGAAGCACATCGAGAACCACCACAGCTCGTACGAGTGCCACCTCTGCAAGGAGACGATAACCTCGAAGCTCGGCATAATGACCCACAATCGGGTGCACCACATGCTCCACCCGGACCTCACCTGCGAGCTCGACAACTGCCGCAAGCTCTTCAGGACGAAGGAGGACCTCGAGTCCCATCGCAAGGACCACAAGCACCACGGCAGCCCGAACGTCTGTGACTTTTGCGGTGACACCGTCGAAAACAAGCTCAAGCTCAAAATGCACATACTGAGCCTGCACAGGAACGAGATCGGCGTCTCTTGCGGTGTCTGCCTCATACCCATGAAGGATCCCAAGGACCTTAAAAAGCACGTCGAGGACGTGCACGAGAGCGTGCTGCTCAAGCCAAACACCTGCCAGGTGTGTGGAAAGCAATACGCATCAAAGTGGAAGGCCTTTGACCACACGAAGAAGTGCCACGGCAAGGTGTTCCGCACGTGCAAGCAGTGCCTCGCCGTATTCACCTCCGACGAGGATTTGCGCTACCACTACGAGCACATACATAACATTCCAAAGGACCAGCTGGACGCGTTCCAGTACCGGCTGGAGGTCGCGGGCAGCAAGATGGACGACTACGACCTCGGGCCCCTCGAGGTCGTCGTCAAGGAGGAGCCCGAGGAGCTGGACTTCGACATGGAGCCCTTCGACGAGGACAACTGCAACTCCAACGACTCGAAGAGGCGGCGCTCGATCGGCGACACCTACGACTGCGAGATCTGCCCGGAGATATTCCTTAACCACGAGCTCCTCTCGTCCCATTATCGGAACGTCCACAATACCGATCCCACGAGGATGTTCAAGAAGATGCGGCTCGAGCCCGCTGCCAAGACCAAGAAGAAGACCCGCGACCGCGAGAACTACGAGTGCAAGAACTGCCAGAAGCAGTTCTGCACCAAGACCCTCTACCTCGGCCACATAAGCGTATGCACGCGCAGGTCGACCTCGATCCTCGAGGCACATCTCAAGAACAACAATCAGATGAAGCGCGAGGAGCCGGAGCCCGTACTCTGCGAGACCAATCTCAACATACCGGACTTCAACCTCTTCGAGGACATAAACATGCAGCTGTCCGGGCAGAAGCCGGTCCCGAGTCTCATGCCCCTCGGGCACCCGTCCTCAAAGTCCTCCAAGTACTCGAGGAAGGACTCGCGGAAGGTCTACGACGAGTCGACCAATACCGAGTGCACCTGCGAGGTGTGCGGCAAGCAGTGGCCAGCGAAGAAGCACCTCTGGCAGCACCTGATCAGGTTCCACAGGGCCGAGGCTGCCGTAACCTGCGGCGTCTGTCTCAAGCTCTGCGCGACCTACGAGGACCTGGCCGAGCACCTGCGCTGCGCCCATCCGGCCATCCTCTCGACCGCGGGCAATAACTTCACCTGCAAGATATGCGGCCGTTACCACAACGCCAGGAGCAAGCTCCTCCTACACATGAGCATTCACATAAACTGCGCGGCGAATTCCATGTGCCAGCGGTGCAACAGGAGCTTCGAGAACGACGAGAAGCTGAAGGAGCACATCGGCGTCTGCCTCGGGGCGCAGGGCGAGGAGCACGGCCCCGACAAGGCCAGCAAGGACGAGGGCGAGGAGAAGGGCAGTCTAATCGGCGACGAGGACGAGCCCGAGGACAACGAGTACGACGTTGAGAAGTCTGACGTCGAAGAGAACGAGACGATGAGCATCGGATACGAGGAGGAGGAGGAGGAGCAGGAGCAGGAGCAGGAGCAGGAGGTGGCGGAGATGGCCGAGAGTGCCGACGAGAAAAGAAGCCAAATAATGCCTCTCGCGGCCTCGCAGGCCAGCGACGAGCGCCGGGATAACGACAGCCAGGACGAGCTAAGCTCGCCGGGGCGCGCTCTTGGCAACGACCTCGGCTCCAAGAGTCGTAATAATAAGAGCGGCGAGAGTGACGTAGATAGTAGCGAGATCGAGGAGATCGAAGGGGAGGAGGCCGAGATCTCCGAGGAAGAGGATGAGGTGCGCCAGGCCGAGGTCGTTGATCCCAACAGCGCCTTCCACGCAGACAATAACTCAAGGAGCAGTAATGAAGGTGGGGAGCATGGTGTTAACGAGGAGGAAGAGGAGGTGCTCGAGGTCGACGAGAACGAGATGCACAATCTTAACGGCACGGTCCTCATGCTCGCGAACGACGCCGACGGCAATCAGATTCTTATTCAGCGTAACGTGGCCGACCTCGAGAACGATGACTCGGTCCACGACATGGCACAGTACGTCTTCCAGGACGGGACGGGCTTCGCCCTCGAGGACTACGAAGCCATCGTCGAGAACCAAGATATAGAGGACGTGGAGGGTGATCAAGAGCAGGAGGAGGAAGATGATGAGATGGAGATGGAGATGGAGGAGGAGGATGAGATACAAGAAGTGGAGCAGGACGAAGACGAGGTCAGCTCTAGTGCCAAAAGCTAA
- Protein Sequence
- MVLSWVSIGRAPRPERNQPPSPRHELVVVPASSTYVPTAPLLLLLPTPLPLVVSGRGERSAPFSLNLSFFLLIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPEEAKAQIKQEGEDVEPYSELRMELLKEKNMPMLIPEASVVNPNAALGTPPRLMSDGEQEPDMEDLTHEHDMGDGRLDDQDDQDDQKSDEYEMDMETNPSDFLEMSALVPEEENVMSQSQVHGHQQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPEMPIPYVQPDSRHQCKTCPKMYTNITDLNKHSRVCLGEQQRKEMVNNSMNSQNFAKLKNALEQNSDLSSIDSDYENKDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQANMSIKDXXXXXXXXXXXXVCPLNFATADDLRQHEKSHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPTPLIESDKCLKKSMQDANVQSLAIKEEQNITKENSTSPFSPDIMENDEDEQENGNDMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNTNYYNENVNSNEGNDLIMDCDDESEKVDCYICYKSFPNEDHLIRHQRNAHKSEQLIQMGEFGGNGAAAGQNGTGIRAQYHLFFVCELCGSSHPSKWERWLHVSSMHGNESSIKCERDDCAKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVHQLSQHVKVKHWPLTNGDFSCDVCGRPYSNKSKMSRHRKIHGLDGEVYNPAATNSSLIINDASMNDASGSIYAITISDSYENSGLPIPLQLDNGLPQPIEPATAELSCEMCGDLKFPCLEDLCNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHLAAHIAKIHRYEPELKNEIRDTMSYKSSGYNAASAAAAAAAAAAAAAAAAAEDDVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMLHPDLTCELDNCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGSKMDDYDLGPLEVVVKEEPEELDFDMEPFDEDNCNSNDSKRRRSIGDTYDCEICPEIFLNHELLSSHYRNVHNTDPTRMFKKMRLEPAAKTKKKTRDRENYECKNCQKQFCTKTLYLGHISVCTRRSTSILEAHLKNNNQMKREEPEPVLCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHPSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYEDLAEHLRCAHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCAANSMCQRCNRSFENDEKLKEHIGVCLGAQGEEHGPDKASKDEGEEKGSLIGDEDEPEDNEYDVEKSDVEENETMSIGYEEEEEEQEQEQEQEVAEMAESADEKRSQIMPLAASQASDERRDNDSQDELSSPGRALGNDLGSKSRNNKSGESDVDSSEIEEIEGEEAEISEEEDEVRQAEVVDPNSAFHADNNSRSSNEGGEHGVNEEEEEVLEVDENEMHNLNGTVLMLANDADGNQILIQRNVADLENDDSVHDMAQYVFQDGTGFALEDYEAIVENQDIEDVEGDQEQEEEDDEMEMEMEEEDEIQEVEQDEDEVSSSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464130; iTF_01524173;
- 90% Identity
- -
- 80% Identity
- -