Wpum017020.1
Basic Information
- Insect
- Wiebesia pumilae
- Gene Symbol
- lov
- Assembly
- GCA_018907045.1
- Location
- JACCHZ010000105.1:6917528-6920152[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-18 4.8e-14 53.3 0.0 1 44 502 545 502 546 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGCGGAGAGTCCTGACGAAATGGCCCTGCAGTCGCACTACTCGCTCAGATGGAACAATCACCAAGCGCATATACTGCAAGCCTTCGAGGCGTTGCTGCATGCCGAGATACTCGTGGACGTGACCCTTGTGTGTGCCGAGACAAGCTTGAGGGCCCATAAAGTTGTGCTGAGTATCTGCAGTCCCTTCTTCGAGCGGATCTTTGCGGAACATCCGTGCAAACATCCTGTGATTGTACTAAAGGACTTCCCGGGACGTGAAATCGCCGCTCTCATCGACTTCATGTACCGCGGTGAGGTACGAGTCGGCCGCGAGGAGCTGCCCAGCCTTATGCACGCCGCCGAGAGTCTCCAGATTCGGGGTTTGGCCTCCTCAGAACCACGACCCGCGAGTCCACCCTCGACGCCTAATACCGATTTGCTGATGGGTGAGCCCTCGACGCCTGAGGGGGCGCGGCAGATGCTTGTCGAAGGTACCACCCTCGAAGAGGATGAAGAGAACATTTCGGAGTTCGCTACCCCTACTGCGACACGCTTGCCTTTGTTGCCTCGAGACCTTAGGCCTCAAACCGCTGGCCAACCTAGTTTAGGCTTACGCGAGTTCAGAGACGCCTGCGGCTCACCGCTCATGCCTAGACGAAAACAGGCCAGGCCGAGGCGAAGGTCCGGGGAGCTCGTGCCCCAAGACCTCAGTCGTCCTCATCCTCCGACGAGTCTCAGCCCACCGAGCACCGGCCTCAATCTCAGCCAAAATCAGCTTACACCCCAGCACCTACACCAACAGCAGCAACAAGCCCATCCGCAACCGAACAGTCAGCAAGAGGACATGGCCGAAAACCTTTCGATGAAGAGGGAACCCAAGCGCTCCCTTTCCCCTGCGACCTCGAACGAGAGGCTCGTCAAATCCGAAAGCGAAGCCGCGAGTAGTCCTCGCGGTTCACCCCTCACCGGTACCAGTCTTCATCCCGACGCCTCCTTCTCGGATATCCCTGCAGCCGGTCTTACCGCCATGTCAGCATTAGCCCTCACGCCACCCCACCATCACGGCAGCGAGTACTTGACCAGCCTCGGACAGTTCGCGGCCCAGTGGCTTCCATCAGGTCAATCGAGTAGTCAGACAGGCCAACCCAGTCAACCCCGCGACGATAGCCCTCATGCCAAGCCAGCCGGGAGCTTTTCTTATCAGCAAAGCGAATCGCCCCTCGCACCCAGGAGCGCCTTTCCTATGGATGGGATGGCGCCCCTAGGAGCTGCGGCGGGCCTTTTCCCCCACGGTGGGCCCCTCGAGCTCCACGACAGCTTCAAACCTGAGAGCTTTCACGGACTGTTCGTCGGGGCTAGCCTCGGTCAGCAGCAGCATCACCCCGCAAAGAAGCCCAAGAAGCACCGGACCGATGGCCTTCCCCGTCGCTGGAGCGAGCATGCGAGAGGTCTCGCAGTATGTAGACCCAAGGGCCAGCACAGTGCTCCCCGAGGCGGACCGCCCCGTTCCTGGACGAATGCCGACCTCACCGAGGCCCTCACCATGGTCTGGAACAAGAAAATGACGACCTCCCAGGCGAGTCGCGTCTACGGCATCCCCTACAACAGCTTGCTTATGTACGTGCGCGGCAAGTACGGCAAAAGCCTGAAGCTCGAACAGCTGCGAAGGGATTGCACTGCGGGCGAGGTCATGAACTCGCTCAATAATAACGTCAAGCCGATCGAGCCTCCAGGTCTGACGGGACACCCGGGTCATACCGGTCACGGGCACCCGACCCACTCCTCTGACGCCGAGACCAACTTCGCGCATCATCCCCTGCTGAGCGGAGGCTTGGCTCAGGGCTTTTTCCCCGACTTCAGCGGTTTCCCGGTGCCGGTTAACATGGTTCATCTACTACCGCCAAGCGAGCAGAAAGCTTTCGATACACCGACGAAGCCCCAGGGCAGCAATGGACCTAGCAATGGCCACCAAGCTCTGCGATCAGAAGAGCTACTGATAGCCGGTAGGAGTAGGAGCCCCTCGCCGATCGACGCCTCGACTACTGGACTGCGCGATGGTTTGCTCCCGGGCCCAGCTCAGTCGGCGCCGGCGTTGCTCCAACAAAATGGCTCGGACTGA
- Protein Sequence
- MSSVAESPDEMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCAETSLRAHKVVLSICSPFFERIFAEHPCKHPVIVLKDFPGREIAALIDFMYRGEVRVGREELPSLMHAAESLQIRGLASSEPRPASPPSTPNTDLLMGEPSTPEGARQMLVEGTTLEEDEENISEFATPTATRLPLLPRDLRPQTAGQPSLGLREFRDACGSPLMPRRKQARPRRRSGELVPQDLSRPHPPTSLSPPSTGLNLSQNQLTPQHLHQQQQQAHPQPNSQQEDMAENLSMKREPKRSLSPATSNERLVKSESEAASSPRGSPLTGTSLHPDASFSDIPAAGLTAMSALALTPPHHHGSEYLTSLGQFAAQWLPSGQSSSQTGQPSQPRDDSPHAKPAGSFSYQQSESPLAPRSAFPMDGMAPLGAAAGLFPHGGPLELHDSFKPESFHGLFVGASLGQQQHHPAKKPKKHRTDGLPRRWSEHARGLAVCRPKGQHSAPRGGPPRSWTNADLTEALTMVWNKKMTTSQASRVYGIPYNSLLMYVRGKYGKSLKLEQLRRDCTAGEVMNSLNNNVKPIEPPGLTGHPGHTGHGHPTHSSDAETNFAHHPLLSGGLAQGFFPDFSGFPVPVNMVHLLPPSEQKAFDTPTKPQGSNGPSNGHQALRSEELLIAGRSRSPSPIDASTTGLRDGLLPGPAQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01524135; iTF_00305736; iTF_00305570; iTF_00708048; iTF_00707779; iTF_00708467; iTF_00708626; iTF_00845205; iTF_00845353; iTF_01216699; iTF_01216907; iTF_01219197; iTF_01219001; iTF_00464096; iTF_00463918;
- 90% Identity
- iTF_01219197;
- 80% Identity
- iTF_01524135;