Ekon028280.1
Basic Information
- Insect
- Eupristina koningsbergeri
- Gene Symbol
- lov
- Assembly
- GCA_018907245.1
- Location
- JACCHV010000027.1:2479011-2481625[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-18 5.8e-14 53.3 0.0 1 44 468 511 468 512 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCGCCGCGGAGAGTCCTGACGAAATGGCTCTGCAGTCGCACTACTCGCTCAGGTGGAACAATCACCAGGCGCATATATTGCAGGCGTTTGAGACGCTGCTGCACGCCGAGATACTCGTCGACGTGACCCTCGTGTGCGCCGAGACGAGCCTCAGGGCTCACAAAGTCGTGCTGAGTATCTGCAGTCCTTTTTTCGAGCGGATCTTCGCCGAACATCCCTGCAAGCACCCTGTAATTGTTTTGAAGGATTTCCCAGGTCGGGAGATTGCCGCACTTATCGATTTCATGTATCGCGGAGAAGTGCGCGTTGGTCGGGAAGAGTTACCCGGTCTCATGCACGCCGCCGAAAGCCTCCAAATCCGGGGTCTAGCTTCCTCGGAGCCGCGTCCCGCAAGTCCGCCCTCGACGCCAAATACTGATTTGCTAATGGGTGAGCCCTCGACACCTGAGGGCGCGAGGCAGATGCTTCTCGACGGTATTGCTCCAGAAGAGGACGAAGATAACACTACGGAGATCGCAGCTCCCATAGCAACTTCTTTACCTCTTATATCCAGAGACCTGAGACCTCAAACTGCCAGTCAACCAAGTTTTGGTCTACGTGAATTCAGGGATACCTGCAACTCACCACTCATGCCTAGACGGAAACAGGCTAGGCCTAGACGAAGGTCTGGGGAGCTTGTGCCCCAAGACCTCAGTCGGCCGCATCCTCCAGCGAGTCTCAGTCCACCAAGTACAGACGTGGCCGAAAACCTTTCGATGAAAAGAGAATCCAAGCGCTCTCTTTCTCCTTCGACCTCAAACGAAAGACTCGTCAAGTCCGAAAGCGAAGCGGCTAGCAGTCCTCGTGCCTCGCCTCTTACTGGTACCAGCCTACATCCTGACACTTCTTACTCGGATCTTCCAGCTGCAGGCCTCACTGCCATGTCTGCTTTGGCTCTGACACCACCACATCACCATGGCAGCGAATACCTAACCAGCCTCGGGCAATTCGCAGCTCAGTGGTTACCCCCTGGTCAGTCGGGCCAGTCCAGTCAACCCCGCGACGGCAGTCCGCATGGTAAGCCACCTGGAAGCTTTCCTTATCAGCAGAGCGAGTCACCTCTCGCACCCAGAAGCGCCTTTCCCATGGACGGGATGGCGCCCCTTGGCGCTGCAGCAGGTCTTTTCCCTCACGGAGGTCCCCTCGAGCTTCACGACAGTTTTAAACCCGAGAGCTTCCACGGCTTGTTCGTTGGAGCAAGTCTGGGCCAACAACAGCACCACTCCACGAAAAAGCCCAAGAAGCATCGATCCGATGGTCTTCCCCGGCGCTGGAGCGAGCACGCGAGAGGTCTTCCCGTGTGTAGGCCCAAGGGCCAGCACAGCGCTCCTCGAGGTGGCCCACCCAGGTCTTGGACCAACGCCGATCTGACCGAAGCTCTGACCATGGTTTGGAACAAGAAAATGACGACTTCCCAGGCGAGCCGCGTCTATGGCATTCCTTACAACAGTCTACTCATGTACGTACGAGGAAAGTACGGCAAGAGCTTGAAACTCGAACAACTGCGGAGGGATTGCACTGCGGGCGAGGTCATGAACTCGTTAAATAACAATGTCAAAGCGATCGAGCCTCCGAACTTGACCGGCTTGCCCAGCCATCCTGGTCACGGACACTCGACTCACCCATCCGACGCCGAAGCTAACTTTGCGCATCATCCCCTGCTAAGCGGAGGCTTGGCCCAGGGGTTTTTCCCCGACTTCAGTGGTTTCCCAGTGCCGGTCAACATGGTCCACCTACTACCGCCGAGTGAACAGAAGGCGTTCGAAGCAGCTACGAAGCCTCAGGGCAGCAACGGGCCCAGCAACGGACACCAGCCTTTGCGACCGGAAGAGATGCTAATGACTGATAGGAGTAGGAGTCCTTCACCGATCGATGCTTCGGGGATTGGGTTGCGTGACAGTCTGCTATCCAATACTTCCCAGCAATCGACACCAGCATTACTACAGCAAAATGGCTCGGACTGA
- Protein Sequence
- MSSAAESPDEMALQSHYSLRWNNHQAHILQAFETLLHAEILVDVTLVCAETSLRAHKVVLSICSPFFERIFAEHPCKHPVIVLKDFPGREIAALIDFMYRGEVRVGREELPGLMHAAESLQIRGLASSEPRPASPPSTPNTDLLMGEPSTPEGARQMLLDGIAPEEDEDNTTEIAAPIATSLPLISRDLRPQTASQPSFGLREFRDTCNSPLMPRRKQARPRRRSGELVPQDLSRPHPPASLSPPSTDVAENLSMKRESKRSLSPSTSNERLVKSESEAASSPRASPLTGTSLHPDTSYSDLPAAGLTAMSALALTPPHHHGSEYLTSLGQFAAQWLPPGQSGQSSQPRDGSPHGKPPGSFPYQQSESPLAPRSAFPMDGMAPLGAAAGLFPHGGPLELHDSFKPESFHGLFVGASLGQQQHHSTKKPKKHRSDGLPRRWSEHARGLPVCRPKGQHSAPRGGPPRSWTNADLTEALTMVWNKKMTTSQASRVYGIPYNSLLMYVRGKYGKSLKLEQLRRDCTAGEVMNSLNNNVKAIEPPNLTGLPSHPGHGHSTHPSDAEANFAHHPLLSGGLAQGFFPDFSGFPVPVNMVHLLPPSEQKAFEAATKPQGSNGPSNGHQPLRPEEMLMTDRSRSPSPIDASGIGLRDSLLSNTSQQSTPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01523952;
- 90% Identity
- iTF_00708048;
- 80% Identity
- iTF_00708048;