Basic Information

Gene Symbol
osa
Assembly
GCA_018907045.1
Location
JACCHZ010000167.1:253006-273878[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-09 3.7e-05 25.5 0.1 47 89 9 48 6 48 0.91

Sequence Information

Coding Sequence
ATGAATACTTACAATCAGTATTTTCTGCAGGTTACTAAAAATAAAACGTGGAAAGATATTGCTGGTCTGTTGGGTATTGGTGCTAGTAGTAGCGCAGCTTACACCTTGCGTAAACATTACACTAAACACTTATTAGCTTACGAATGCCATTTTGATCGCGGCGGAGTTGATCCACAGCCAATAATAAATCAAGTAGAAGCTGGATCAAAAAAAAAAGTATCTAAGGGTACATCATCTGTACCTTCACCAGGATCATCCAACTCTCAAGATTCTTTCCCAGCAGGTGGATCAAACAATACGCCTATAGATGGTTACAGCAATTATCAAAGCAATTATTCCGGAAATACAACTACTGGCTCATCTGGGGATTATAATCCTCCTCCACCTCGACCTCCAAGTCAAAGTAATACATCTTCACATCAAAGTATCCAACAAGGTAATTATCAAAACACTTCATCTTTTCAAAATTACTCTCAGGATCAATATGTTCGACCACAAGCGAGTGCAATAACACAACAAAATGAATTTAGTCAATCTTATTCGACTCGTACGCATTATCCTCCTTATGTTGCTGATGTTGATAGAAGTTATACTGGAGGCAATTTAACTTCAAGTAATACCAGTGGGCAGGATATTTACAATAGATATAGTGGAAGTCAACAAACTGGTAGTTACTCTGGTGGAGCCTCTCCTGCAAATAGAAGTACATATTCTACAGCATCGCAAGGTCATTCAACGAATACAGCACAACAAACAGTTTCAACTCAACAAACAACTTCTCAAGCACAATCAAATGTAGGGACAACATATGCATGTCCACAAGATTATTATAGACAAGAACAGGGCAGCTATGGAACTTCGCTTGGAAATCAAATTTATGCTAATTCTGGAACGGCTAATAAAAATATGCCTCCTCCACCACCAGGGCCGCAACAACCACGTCGTCATCCAGATTTTGTTAAGGAACAGCAATATTCAACATATAATCAACAAAGAGCAACATATCCAGGATGGCCAGTGGGAACTAATCAATATAATTCTGGAAATGGTGTTAGAGTGCAATACCAAAATCAACACCTGGCAACCTCATCTCAACAACAGCATCAGCAGACCCAGCAGACTCAGTCACCTGGTGCTACATCTGTATCTTCTACAATTAGCATGAACAGTGCTCAGCAATGGAGTAACCAGCAAAATACTAGATCTTCTGCACAAACAAATATAAATTCTTTAGTTCATGCACCGTCTACATGGGATCATAGATATAATCAAACTTCATCTTTATACACTGCTCCTGGATCGCATCAGAATCAACTTGGTATGAGTCCTGTAATTAATCAACAGTCTATTACAAAAAGGGAAATGACATTTCCAACAGATAGCATTGAAGCAATAACGCCGTTACTATATAAACGAAGAAAGTTAACCCGTGCTGATATTGTTCCAGTGGAAGCTTGGAGAATTATGATGGCATTAAGATCTGGCTTGTTAGCTGAAAGTTGTTGGGCCTTAGATGTTCTAAATATTCTTTTGTTTGATGATTCTTCTGTGCATTATTTTGGATTAGCACATTTACCAGGATTGTTAGATGTATTATTAGAACATTTTTCTCGATCTCTATCTGATATGTTTGATTCTTCACTTATTAATGAAGATCATTACTACTATCAACATAATTTGCATAGTCACGAAATTGATCTTGGAGCAGTAATTAGACCTGTTGATCCTGAAGACCGAACAAAACTTCTTTCTTCATCTAATTATACATTTTCATCTAGGCGCGGTAAACCAGTAAAAGTTGTACCTAGAGATGATGATATATTTATTTTAGATAGTCGACGATCTTGGGATTATCAAGATAGCGAAACAGAAATAGAACCTTGGCAAGTTGACAGCAATGCAATTAATTATATTGTTACATGTTTTGAATCACAAGTTAGTAACGTTTCATTTACAAGTCATTTAAATAGAAAATTACCAATACCACAAAAGGAATTAGAAAGCATAAACTCAAAAAATGAATTAAGTTGTTGTAAAGCTACAAAAATAAATGAAAATTTGAATGTTAAATCTAATAAATGTAATTATTCTAGAGAACAAAAAGAAATACATATTGAACCAAAACATCAATATCAGGAAAAAAAGAAAAAGACGAAAACCTTGAGTGATGTACTTTCTAGAATAAAAAAAGAACCTGTTGAAATGAATGATCTTACACGAGAGCTCTTTGAGAAAAAAAATGATGGTTCTAAAAGAGATAATGAAACTGACATAAAAAATGTTAATAATTTGACTGAATATTTTGATGCAGAAATATTGAAAAATAATGTGTCATTACATTCTAAACATCAAAATGGTTTAAGTGATTTCAGTAGTACAGTAATATCTTCATCTCTCACTCATAATATTGATCAGAAAAAAGAATTTATTCAAAAAGCTTCCATAAGGGAAACAGAGGCAGATCCAGGTGATGAAGAAAAGGAAAATAGAAAGTGTTATTCAGTAGAAGAACAAGTAGGACCAAAATTAAAAATACGGGATCCTGCTGGCACACTTAAAAGAAGAAGAATAAGTGACTATGAAGATGAAAGTTATTCTAGGGATGAAGCAAGTTTATATCTTGTTACTGAAACACAAGATAACTTAGCTCGAAAATGTGTATGTCTTTCAACAATTTTAAGGAATTTAACATTTATTCCAGGAAATGAATTAGAATTTGCAAGAAATGTAACATTTTTAAGTTTATTAGGAAAATTGTTATTACTTCATCATGAACACCCTACACGTGCGCAGAAAACTCGCAACTATGATCGTGAAGAAGATGCTGATTTTGCAGATTCGTGCAGTAGTTTACAAGGTGAAAATGAATGGTGGTGGGATTTTTTATATCACATACGAGAAAATGTATTGGTAATGGCAGCTAATATTGCTGGTCATATGGACTTGAGTCAGTATCCAGAAGAAATTTCTAGACCAGTTTTAGATGGTCTTCTTCATTGGGCAGTTTGTCCTGCTGCACATGGCCAAGATCCTTTTCCAACGGTTAGTTTGAATTCATCCTTATCGCCTCAAAGATTAGCTCTTGAAGCTCTTTGTAAGCTCTGTGTTACTGAAAGCAATGTAGACCTCGTAGTTGCTACTCCACCATACTCCCGACTTCAAAAATTATGCTCAGTATTGTCACGACTTCTTTGTAGAAGTGAAGAACAAGTCTTACGAGAATTCGGCGTAAATCTATTACATTTCCTATCAGCAGCGGATAGTGGAGTAGCTCGTACTATTGCATTACAGACACCTTGTGTTGCTTTATTAGTTGCATTCATTGAACAAGCAGAAAATAGTGCTTTAGGTGTAGCTAACCAACTTGGTATAGCAGCTCTTCGTGATAATCCTGAGTCTATGGGAACCAGTTTGGATATGTTACGAAGAGCTGCTGGTACTCTTTTAAACCTATCTAGGCATCCAGATAATAGAACTTTATTACTGCAGCATGAATCTCGCCTTCTAGCGCTCGTTATGAGTCAAATTCTAGATCAACAAGTTGCAGCAATAGTGGCGCGAGTGCTTTTTCAATGTTCTCGTGGAACTACGTAA
Protein Sequence
MNTYNQYFLQVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKVSKGTSSVPSPGSSNSQDSFPAGGSNNTPIDGYSNYQSNYSGNTTTGSSGDYNPPPPRPPSQSNTSSHQSIQQGNYQNTSSFQNYSQDQYVRPQASAITQQNEFSQSYSTRTHYPPYVADVDRSYTGGNLTSSNTSGQDIYNRYSGSQQTGSYSGGASPANRSTYSTASQGHSTNTAQQTVSTQQTTSQAQSNVGTTYACPQDYYRQEQGSYGTSLGNQIYANSGTANKNMPPPPPGPQQPRRHPDFVKEQQYSTYNQQRATYPGWPVGTNQYNSGNGVRVQYQNQHLATSSQQQHQQTQQTQSPGATSVSSTISMNSAQQWSNQQNTRSSAQTNINSLVHAPSTWDHRYNQTSSLYTAPGSHQNQLGMSPVINQQSITKREMTFPTDSIEAITPLLYKRRKLTRADIVPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVHYFGLAHLPGLLDVLLEHFSRSLSDMFDSSLINEDHYYYQHNLHSHEIDLGAVIRPVDPEDRTKLLSSSNYTFSSRRGKPVKVVPRDDDIFILDSRRSWDYQDSETEIEPWQVDSNAINYIVTCFESQVSNVSFTSHLNRKLPIPQKELESINSKNELSCCKATKINENLNVKSNKCNYSREQKEIHIEPKHQYQEKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGSKRDNETDIKNVNNLTEYFDAEILKNNVSLHSKHQNGLSDFSSTVISSSLTHNIDQKKEFIQKASIRETEADPGDEEKENRKCYSVEEQVGPKLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARKCVCLSTILRNLTFIPGNELEFARNVTFLSLLGKLLLLHHEHPTRAQKTRNYDREEDADFADSCSSLQGENEWWWDFLYHIRENVLVMAANIAGHMDLSQYPEEISRPVLDGLLHWAVCPAAHGQDPFPTVSLNSSLSPQRLALEALCKLCVTESNVDLVVATPPYSRLQKLCSVLSRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAENSALGVANQLGIAALRDNPESMGTSLDMLRRAAGTLLNLSRHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00707630;
90% Identity
-
80% Identity
-