Basic Information

Gene Symbol
osa
Assembly
GCA_018907245.1
Location
JACCHV010000104.1:254873-267727[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-08 0.00015 23.9 0.0 49 89 2 39 1 39 0.91

Sequence Information

Coding Sequence
ATGGTTACAAAAAATAAAACTTGGAAAGATATAGCTGGTCTTTTGGGAATTGGAGCTAGTAGCAGTGCAGCTTACACACTACGAAAACATTATACCAAACACTTATTAGCTTATGAATGCCATTTTGATCGTGGAGGTGTCGATCCTCAACCAATAATAAACCAAGTAGAAGCTGGATCGAAAAAAAAAGTATCCAAAGGTACATCATCTGTACCTTCTCCAGGATCATCCAACTCTCAAGACTCTTTCTCAGCAAGTGGATCCAATAATACACCGCTGGATGGGTATGGAAATTATCAAAGTAATTATTCTGGTAATGCAAGTACCGGATCATCAGATTATAATCCTCCTCCACCTCGGCCTCCGAGCCAAAGTAATACATCTTCACATCAAAGTATGCAGCAAGGTACTTATCAAAATTCTCCATCTTTTCAAAGTTATTCACAAGATCAGTATATTCGACCACAAGCAAGTACGATAACACAACAAAATGAATTTAATCAACCTTATTCTAATCGTACACATTATCCTACTTATGTTGCTGAAGTTGATAGAAGTTATACTGGAGGCAATTTATCTTCAAGTAATACTGGTAATCAAGATATCTATAGTCGATATAGTGGAAACCAACAGAGTAGCAGTTACGCTGGCGGGACACAAACAAATAGAACTAACTATTCAACATCATCACAAGGCCATTCCCCAAACACACAACAACAAGCGCTTTCGACTCAACAAACATCTGCTCAATCACAGTCAACTACAGGAGCAACATATGCATGCCCTCAAGATTATTATAGACAAGAACAGGCTAATTATGGAAGTCCTCTTGGAAATCAAATTTATGTCAATCCTGGTAATACTAGTAAAAATATGCCTCCTCCACCACCGGGCCCACAACAACCACGACGTCATCCAGATTTCGTAAAAGAACAACAATATTCGACATACAATCAACAAAGAACAACATATCCTGGTTGGCCAGTAGGAACTAATCAATATGGAACTGGAACTGGCGTTAGAATGCAATATTCAAATCAACATACACCAACATCAACTCAACAACACCAGCAAACACAGCAAACTCAAGCATCAAATTCGACATCTGGATCATCAACCATAGGTATTAACAATACTCAACAATGGAGTAATCAACAAAATATTAGATCTTCTACACAAACAAGTATAAATTCTGTAGTCGGAACACCATCTCCATGGGATCATAGATATAATCAAGCTTCATCATTATATTCAGCTCCTGGATCCCATCAGAGTCAACTCGGCATGAATCCGGTAATTAATCAACAATCTATTGCAAAAAGAGAAATGTCATTTCCAATAGATAGTGTTGAAGCTGTAACTCCGTTACTTTATAAACGTCGAAAGTTAACACGTGCTGAAATTGCTCCGGTAGAAGCTTGGAGAATTATGATGGCATTAAGATCCGGCTTATTAGCTGAAAGTTGTTGGGCTTTAGATGTCTTAAATATTCTTTTGTTTGATGATTCTTCTGTACATTACTTTGGATTAGCAAGTTTGCCAGGATTGTTAGATGTCTTATTAGAACATTTTGCTCGATCACTTTCCGATATGTTCGATTCATCATTAATTAACGAAGATCGTTATTATTACCAACACACTGTTCATGATCAAAACATTGACCTTGGAGCTGTAATTACACCTTTAGATCCTGAAGATCGAACAAAACTTCTTTCCTCGTCAAATTATACTTTCTTGTCGAGACGTGGCAAACCAGTAAAAATCGTGCCTAGAGATGATGATATATTTATTTTAGATAATAGAAGACCTTGGGACTATCAAGATAATGAGATAGGAATAGAACCATGGCAGGTTGATAGCAATGCAATTAATTATATTGTTACATGTTTTGAATCACAAGTCAGTAATGTCTCGTTTTCAAGTCAATTAAAAACTGAAGCATTTCCAAAACCACAAAATTCCGAAACTGTAAACTCAAAAAATGACATAAATTATTGTGATAATATAAAATTAAATGAAAATTTGAATAATAAAATCTATAAATATAATGCTAGAGAACAAAAAGAAATCAATATCGAACAAAAACAACCGCAGCAACAACAGGAAAAAAAGAAAAAAACAAAAACTTTAAGCGATGTACTTTCTAGAATAAAAAAGGAACCAATGGAAATGAACGAACTCACAAGGGAACTTTTCGAAAAGAAAAATGATGGCTCTAAAAAAGATAATGAAACTGAATTAAAAAATGTCAATAATTTAACTGAATATTTTGACTCGGAAATATTGAAAAATAATGCACCACTACATTCTAAACAGCAGAATGGTTTAAGTGACTTTAATAGTACTGTACTTTCATCTGCTTTAAGTTCAGTTTCTGAACAAAAGAAGGAATTAATTCAAAGCAATCTCATAAAAGAAACAGAAATAAATATAAATGAAGAGGAAAAAGAGAATAGAAAATATTACTCAGCAGAAGAGCAAATGGTTTCGAAATTGAAAATACGAGATCCTGCAGGAACACTTAAAAGACGAAGAATAAGTGATTATGAAGATGAAAGTTATTCTAGAGATGAAGCAAGTTTATATCTTGTTACTGAAACCCAAGATAATTTAGCACGAAAGTGCGTGTGTCTTTCAACAATTTTAAGAAATTTAACCTTTATTCCAGGAAATGAATTGGAGTTTGCAAGAAATGTAACGTTTTTAAGTTTATTAGGAAAATTATTGTTGCTTCATCATGAACATCCTACACGTGCACAGAAAACTCGTAATTATGACCGTGAAGAAGATGCTGATTTTGCTGATTCTTGTAGTAGCTTGCAAGGTGAAAATGAATGGTGGTGGGATTTTTTATATCACATTCGAGAAAATGTATTAGTAATGGCAGCTAATATTGCTGGTCACATGGATTTAAGTCAATATCCAGAAGAGATTTCTAGACCAATTTTAGATGGTCTTCTTCATTGGGCTGTTTGTCCTGCTGCACATGGACAAGATCCTTTTCCAACGGTTAGCTTCAATTCTTCTTTATCACCTCAAAGATTGGCTCTTGAGGCTCTTTGTAAACTCTGTGTTACTGAAAGTAATGTAGATCTCGTAGTTGCTACTCCACCATACTCTCGACTTCAAAAATTGTGTTCAGTATTGTCACGACTCCTTTGTCGAAGTGAAGAACAAGTTTTACGTGAATTTGGTGTAAATTTATTGCATTTTCTTTCAGCAGCAGATAGTGGAGTAGCCCGCACTATTGCATTACAGACACCTTGTGTTGCTCTATTAGTGGCATTCATTGAACAAGCAGAAAATAGTGCTTTAGGTGTTGCCAATCAGCTCGGTATAGCAGCTCTACGTGATAATCCTGAATCAATGGGCACTAGTTTAGACATGTTACGAAGAGCTGCTGGTACTCTCTTAAACTTATCCAGGCATCCAGATAATAGAACTTTGTTATTACAGCATGAATCTCGCCTTTTAGCACTCGTTATGAGTCAAATTTTAGATCAACAAGTTGCGGCAATAGTGGCGCGAGTGCTTTTTCAATGTTCCCGTGGAACTACGTAA
Protein Sequence
MVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKVSKGTSSVPSPGSSNSQDSFSASGSNNTPLDGYGNYQSNYSGNASTGSSDYNPPPPRPPSQSNTSSHQSMQQGTYQNSPSFQSYSQDQYIRPQASTITQQNEFNQPYSNRTHYPTYVAEVDRSYTGGNLSSSNTGNQDIYSRYSGNQQSSSYAGGTQTNRTNYSTSSQGHSPNTQQQALSTQQTSAQSQSTTGATYACPQDYYRQEQANYGSPLGNQIYVNPGNTSKNMPPPPPGPQQPRRHPDFVKEQQYSTYNQQRTTYPGWPVGTNQYGTGTGVRMQYSNQHTPTSTQQHQQTQQTQASNSTSGSSTIGINNTQQWSNQQNIRSSTQTSINSVVGTPSPWDHRYNQASSLYSAPGSHQSQLGMNPVINQQSIAKREMSFPIDSVEAVTPLLYKRRKLTRAEIAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVHYFGLASLPGLLDVLLEHFARSLSDMFDSSLINEDRYYYQHTVHDQNIDLGAVITPLDPEDRTKLLSSSNYTFLSRRGKPVKIVPRDDDIFILDNRRPWDYQDNEIGIEPWQVDSNAINYIVTCFESQVSNVSFSSQLKTEAFPKPQNSETVNSKNDINYCDNIKLNENLNNKIYKYNAREQKEINIEQKQPQQQQEKKKKTKTLSDVLSRIKKEPMEMNELTRELFEKKNDGSKKDNETELKNVNNLTEYFDSEILKNNAPLHSKQQNGLSDFNSTVLSSALSSVSEQKKELIQSNLIKETEININEEEKENRKYYSAEEQMVSKLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARKCVCLSTILRNLTFIPGNELEFARNVTFLSLLGKLLLLHHEHPTRAQKTRNYDREEDADFADSCSSLQGENEWWWDFLYHIRENVLVMAANIAGHMDLSQYPEEISRPILDGLLHWAVCPAAHGQDPFPTVSFNSSLSPQRLALEALCKLCVTESNVDLVVATPPYSRLQKLCSVLSRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAENSALGVANQLGIAALRDNPESMGTSLDMLRRAAGTLLNLSRHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01523827;
90% Identity
-
80% Identity
-