Wpum006951.1
Basic Information
- Insect
- Wiebesia pumilae
- Gene Symbol
- dl_2
- Assembly
- GCA_018907045.1
- Location
- JACCHZ010000107.1:3257557-3262281[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-64 1.2e-60 205.8 0.1 1 169 14 186 14 186 0.97 2 2 1.8 1.5e+04 -2.8 0.4 102 142 301 341 298 358 0.74
Sequence Information
- Coding Sequence
- ATGAGTATCATGCGACATAATAATAAATTAATTCCGTATGTGAAAATTATTGAACAACCAGCAAGCAAAAGAACAAGATTTCGATATGAATGCGAAGGAAGATATGCTGGTTCTATTTTTGGAGAAAAGACTACTTCGTTCAAAAAATCATTCCCTACTATTGAAATAGTAAATTACAAGGGCCCAGCATTTATAGTGGTTTCTTGTGTATCCAAAGATCCACCTTATTCCCCCCATCCACATAATATTATTGGAAAAACTAATGATGAAGCATCTAATGGAATTTATTATCTGAAAATTACTTCCGAAGAAATGACCGTTACGTTTAATAATCTTGGAATTCAATGCGTAAAACGCAAGGACATTAAGAAGTCACTAACCACCAGAAAAAATTTAAAAGTAGATCCATTTAATGCTGGATTCAGCCACATGTCTAATCCAGAAAAGATTGACTTATACTGCCTCAGACTCTGTTTTCAAGTTTTTATTGAAGGAAAAGAAAAAGGAAATTTCAACATCCCCTTAGAACCTGTAGTTTCTAATCCAATTCATGACAAAAAAACGATGGCTAGTCCTATAATTAACTTTCTCAGTCACGATTCAGCATCCGTTGCTGGTGGCACTGAAATGTGTATATTGTGCGAAAAGGCGACAAAAGAAAACGTGCAAGTACGTTTTTTTCGAGAAGAAAACAACTGGGAAGCTATAGCAGAGCTCACACCACCTGGGGTTTTTAAGCATGTTTCAATCGTATTTAAATCACCGCAGTACTTTCTGCAAGATATAAATGAGCCAATTGATGTTCGAATACAGTTGCGACGAATTTCTGATGGGGAAACTAGCGAATCGATGCCATTTCAATTTCTACCGTTAAAATCGAATGATTACGGAGCGATAAAAAGAAAAAGACAACGAAATGCTACAATTTCTGAACATATACAATTAGAAGCTGCAAAGAATGATTGGATTAAGGAATTAATCGAAACTGTCGAACGAAATGACTCTACTCCAATACGTATGGCAAATAATTATAATAATGAAAATAAAATAAAAAATGAACCAGAAGCAAATTTCATAGTTGTAGATTCGAATACAACAGATTCATTATTAGGTGTAGAAAATACTGATAATTTCCCAGATATCATCAATAGACAAACAAATAACTATCAAGTTTCATCCAGCTCTGAAAATCTATCGAAATGCTTTAGTATTTCTAATCTGATTAAGAATCCATACAAACTACCTGAAGATGTAAATCTGAATATAAATAAATCAACGGAAATAACGTCTAAAATAAGGATGCCCAATCCTACTCGAAGAAATATAACTGAAAAAGACGACCAAAGTCAAATTTCAGAATTCGATGCTTATTATTTATTAAATCACAGAGAAGAACGAGCTTATAATAAAAAACCCCAAGATTTAATTCTTAAGCATCTCGAGGCAGAAACTGTAAAATACTCCAATTTACAAAATGAAGAAAAATCGCACGATTTTAATTTAAAAAGTAGAAGATCGAACAAAGTTTCACCACCAGTTCAAAATTCATTAGCTTCAAATCAGTCGGAGCCTTCATTTTTACAACTGAATAATAATAATATAAATACGTTTAGTGAAATATCAAGATCAATTTATAATAGACAAAATAACGTATCAGATTACAATGGCAGCCAAGAAGCGCAATGGAGTGAGATACAAAAAATAACAGATCCATGGCAAAATTCACAAAATTGGCAAAGCCATTTGACAATAAAAAGTCACAGATCAAATTCAGTAAATATAAACAATTCTGGTATGATATTAGTTGTTATTATCATTAATTGTGATTATTGGAATCTAAGTTGA
- Protein Sequence
- MSIMRHNNKLIPYVKIIEQPASKRTRFRYECEGRYAGSIFGEKTTSFKKSFPTIEIVNYKGPAFIVVSCVSKDPPYSPHPHNIIGKTNDEASNGIYYLKITSEEMTVTFNNLGIQCVKRKDIKKSLTTRKNLKVDPFNAGFSHMSNPEKIDLYCLRLCFQVFIEGKEKGNFNIPLEPVVSNPIHDKKTMASPIINFLSHDSASVAGGTEMCILCEKATKENVQVRFFREENNWEAIAELTPPGVFKHVSIVFKSPQYFLQDINEPIDVRIQLRRISDGETSESMPFQFLPLKSNDYGAIKRKRQRNATISEHIQLEAAKNDWIKELIETVERNDSTPIRMANNYNNENKIKNEPEANFIVVDSNTTDSLLGVENTDNFPDIINRQTNNYQVSSSSENLSKCFSISNLIKNPYKLPEDVNLNINKSTEITSKIRMPNPTRRNITEKDDQSQISEFDAYYLLNHREERAYNKKPQDLILKHLEAETVKYSNLQNEEKSHDFNLKSRRSNKVSPPVQNSLASNQSEPSFLQLNNNNINTFSEISRSIYNRQNNVSDYNGSQEAQWSEIQKITDPWQNSQNWQSHLTIKSHRSNSVNINNSGMILVVIIINCDYWNLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -