Basic Information

Insect: Wasmannia auropunctata
Gene Symbol: -
Assembly: GCA_000956235.1
Location: NW:2824697-2829906[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.5 2.6e+02 1.8 0.0 1 10 350 359 350 372 0.66

2 12 4.5 3.3e+02 1.5 2.7 1 20 373 392 373 394 0.90

3 12 9.9e-07 7.3e-05 22.5 1.8 2 23 443 464 442 464 0.97

4 12 2.2e-06 0.00016 21.4 0.4 1 23 470 492 470 492 0.99

5 12 0.0003 0.022 14.7 2.4 1 23 498 520 498 520 0.98

6 12 0.00027 0.02 14.8 2.8 1 23 526 548 526 548 0.98

7 12 0.00021 0.015 15.2 1.3 1 23 554 576 554 576 0.98

8 12 3e-07 2.2e-05 24.1 0.4 1 23 584 606 584 606 0.98

9 12 0.0038 0.28 11.2 0.2 1 23 612 634 612 634 0.94

10 12 4.4e-06 0.00032 20.4 1.7 1 23 640 662 640 662 0.98

11 12 1.6e-05 0.0011 18.7 0.6 1 23 668 690 668 690 0.98

12 12 1.9e-06 0.00014 21.6 2.1 1 23 696 718 696 719 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.5	2.6e+02	1.8	0.0	1	10	350	359	350	372	0.66
2	12	4.5	3.3e+02	1.5	2.7	1	20	373	392	373	394	0.90
3	12	9.9e-07	7.3e-05	22.5	1.8	2	23	443	464	442	464	0.97
4	12	2.2e-06	0.00016	21.4	0.4	1	23	470	492	470	492	0.99
5	12	0.0003	0.022	14.7	2.4	1	23	498	520	498	520	0.98
6	12	0.00027	0.02	14.8	2.8	1	23	526	548	526	548	0.98
7	12	0.00021	0.015	15.2	1.3	1	23	554	576	554	576	0.98
8	12	3e-07	2.2e-05	24.1	0.4	1	23	584	606	584	606	0.98
9	12	0.0038	0.28	11.2	0.2	1	23	612	634	612	634	0.94
10	12	4.4e-06	0.00032	20.4	1.7	1	23	640	662	640	662	0.98
11	12	1.6e-05	0.0011	18.7	0.6	1	23	668	690	668	690	0.98
12	12	1.9e-06	0.00014	21.6	2.1	1	23	696	718	696	719	0.96

Sequence Information

Coding Sequence: ATGGCCGTCGTCGAGGAGTTCGATTACCTGTGCCGCCTGTGCGCGACCAAGACAGGCATCCTGATGGGCCTGCCGATATTCGAGGCCGGCGATCAGATGCGCAACATCGACAAGAAGATAGCGGCCTGCCTGCCGGTGCAGGTGTCGTTGACAGATCAACTGCCCAAAGTGGTCTGCCAAGATTGCGCGTACAAGCTGGATCAGTTGTTTGATTTCCGTGAGAAATGTCTACACACGGAAAGGATGTTCATGGAGATGCTGAAGGAGATTGTCAAGGACGAGATCGTGCACATAACCGAGCACGATCTGGCAAGCGTGAGTGACATGGGCACAATTCCGAGGAACCTGAATAGCATACAGATTAATAACGACAACGTACAAAGCCATTCGGCTCACGAGGCCGCGGAATCCACCATGCATACGATGCAAGTGATGGACGAGATGGACCTGGCCGGTGGCGAACAAGTGGTTACTCAGGAAGAGATGGGTCAACAGGACGCAGATATACAAGGCATTGACTGTCTAGACGGTGATACCGTGAGGATGGTCGATGAACACATGCGAGAAGTTTCAAATCATCAGATCACAATGCACTTGGATAGCGATATGACTGTAGTGGGAAACCTGGATGGCCACTTGAGTCAATTAGGGATAAATTATGTTACTTCTATCAATCCTGAGGATCAGAGCCAAGAGCAGATTGTGCATTActgtgaaaatgtaaaatacgaGACGGATCCGATAAAACAGGAATACCACAGATTGCAAGACAGATTAACCACGGAAGAGCCGCAGCACGTACTAAAAAATGATGTATCAGTAGATAATTTCGTCTCCCCCCAAGGTGAAACGGAAAGTGAAATAGAGGAATCATGCATGAACGAAAATGGAACTCACGAACACGTGGACTCCGTGAATTTACCATCCACGAGTCAGATAAATGGCGTACCTTGCGAAATAATGGTTAAATACACGAAGAGAACGAAGAACGCGTTATTGGAATCTACGCTTAGCAATCCTACTATAGACGAGACCGGTTCGCACTGGTACGTGTGCCCGTTTTGCAACGAAGCAGCATTGGAGACGGCCAATCTAGCCGCGCATTTCGAGCAGCACTTCTGCTGCTGTTCCTGCGGCCTATATTTTACCAATGTCGAGGTATTAAATCTACATAAGGAGCAGTGCGATGTATATAAAACTGAGGTGGTAGTCGATAAGGAGAAGAAGGACGTGCAGTTGAACGCAGTGGTGTCGTCGCAAGAGAGCAATGACAATCAGGAGGGGCCGAAGAAACAGTCGACGGCGCGACGGAAGTGGACCGCGAAGGTGTGCACGGAATGCGGCAAGCAGTACAAGTCGAATTACAAGCTGCAGGAGCACATGCGCAAGCACACGGGCGAGAAGCCGTTTCAGTGCACGACCTGCGAGAAGGCGTTTCGCAGCAAGATCGGCCTCGCGCAGCACATGGCCACGCACACGGGCCAGTTCGACTACAACTGCTCCACGTGCGGCAAGGGATTCCAGTGCAAGAGCTATCTCATTGTGCACCAGAGGGTGCACTCGGACCTGAAGCCGTACTCGTGCACCAAGTGCAGTCAGAACTTCAAGACGAAGCAGTCGCTGCTGGACCACGAGAACCGTCACCTCGGCGTGAAGCCGTACATGTGCGAGATCTGCGGCCGCGGCTTCATCACCAAGGGCCTCTGCAAGAGCCACCAGAAGATACACTCCGGCACCGACAATCGCCAGTACCCGTGCGCGGTCTGCAACAAGATGTTCGTCAGCAAGAGCTACCTGAACACGCACTTGCGCATACACACGGGCGAGAAGCCGTATCTGTGCGAGGTCTGCGGCAAGGGTTTCCTCACGCGGGTCGACCTCAGGATCCACTCGACCATGCACACCGGCGAGAAGAGCTTCAAATGCGAGATATGCGGCAAGGTGttcgcgcgacgcgcggcgcTGCGCTGCCATCGACGCTCGCACACGGGCGAGCGCCCGTACAGATGCGACGTCTGCGGCAAAACGTTCACGCAGTTCAGCCCGATGGCGATTCACAAGCGCCTGCACACCGGTGAGCGGCCGTACGAGTGCGACGAGTGCGGCAAGGCCTTCGTGTCCCGATCGACCATGATGTCTCACAGAAAGAAGCATCACGTCACCGCGAGCACCGCGCAAAAGGATGCGGTGTCTGTGCCGCACAACGAGGACGCCGAGGTCAAGATCATCCTCTCGTCCGACATCATAGTCAGAGAGTCGCACGAAGGGATCCAAATTGCAGATTGA
Protein Sequence: MAVVEEFDYLCRLCATKTGILMGLPIFEAGDQMRNIDKKIAACLPVQVSLTDQLPKVVCQDCAYKLDQLFDFREKCLHTERMFMEMLKEIVKDEIVHITEHDLASVSDMGTIPRNLNSIQINNDNVQSHSAHEAAESTMHTMQVMDEMDLAGGEQVVTQEEMGQQDADIQGIDCLDGDTVRMVDEHMREVSNHQITMHLDSDMTVVGNLDGHLSQLGINYVTSINPEDQSQEQIVHYCENVKYETDPIKQEYHRLQDRLTTEEPQHVLKNDVSVDNFVSPQGETESEIEESCMNENGTHEHVDSVNLPSTSQINGVPCEIMVKYTKRTKNALLESTLSNPTIDETGSHWYVCPFCNEAALETANLAAHFEQHFCCCSCGLYFTNVEVLNLHKEQCDVYKTEVVVDKEKKDVQLNAVVSSQESNDNQEGPKKQSTARRKWTAKVCTECGKQYKSNYKLQEHMRKHTGEKPFQCTTCEKAFRSKIGLAQHMATHTGQFDYNCSTCGKGFQCKSYLIVHQRVHSDLKPYSCTKCSQNFKTKQSLLDHENRHLGVKPYMCEICGRGFITKGLCKSHQKIHSGTDNRQYPCAVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLRIHSTMHTGEKSFKCEICGKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECDECGKAFVSRSTMMSHRKKHHVTASTAQKDAVSVPHNEDAEVKIILSSDIIVRESHEGIQIAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01087395;
90% Identity: iTF_00385783;
80% Identity: -