Basic Information

Insect: Wasmannia auropunctata
Gene Symbol: -
Assembly: GCA_000956235.1
Location: NW:3116123-3120722[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 1.1e+02 3.1 0.1 2 20 126 143 125 145 0.77

2 14 0.00035 0.025 14.5 1.4 2 20 153 171 152 174 0.94

3 14 0.00021 0.016 15.1 1.2 1 23 180 203 180 203 0.93

4 14 9.4e-06 0.00069 19.4 1.5 1 23 211 233 211 233 0.98

5 14 1.5e-05 0.0011 18.7 0.5 1 23 394 416 394 416 0.97

6 14 0.002 0.15 12.0 0.3 2 21 426 445 425 446 0.93

7 14 0.00023 0.017 15.0 2.6 1 20 468 487 468 490 0.92

8 14 0.014 1 9.4 0.5 1 23 495 518 495 518 0.95

9 14 9.7e-07 7.1e-05 22.5 0.3 1 23 524 546 524 546 0.98

10 14 0.00011 0.0082 16.0 2.2 1 23 553 575 553 575 0.99

11 14 0.00027 0.02 14.8 0.4 3 23 583 603 581 603 0.97

12 14 0.00031 0.023 14.6 0.2 1 23 609 632 609 632 0.96

13 14 0.14 11 6.2 0.2 1 23 646 668 646 668 0.94

14 14 9.6e-05 0.007 16.2 0.1 1 23 929 951 929 951 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	1.1e+02	3.1	0.1	2	20	126	143	125	145	0.77
2	14	0.00035	0.025	14.5	1.4	2	20	153	171	152	174	0.94
3	14	0.00021	0.016	15.1	1.2	1	23	180	203	180	203	0.93
4	14	9.4e-06	0.00069	19.4	1.5	1	23	211	233	211	233	0.98
5	14	1.5e-05	0.0011	18.7	0.5	1	23	394	416	394	416	0.97
6	14	0.002	0.15	12.0	0.3	2	21	426	445	425	446	0.93
7	14	0.00023	0.017	15.0	2.6	1	20	468	487	468	490	0.92
8	14	0.014	1	9.4	0.5	1	23	495	518	495	518	0.95
9	14	9.7e-07	7.1e-05	22.5	0.3	1	23	524	546	524	546	0.98
10	14	0.00011	0.0082	16.0	2.2	1	23	553	575	553	575	0.99
11	14	0.00027	0.02	14.8	0.4	3	23	583	603	581	603	0.97
12	14	0.00031	0.023	14.6	0.2	1	23	609	632	609	632	0.96
13	14	0.14	11	6.2	0.2	1	23	646	668	646	668	0.94
14	14	9.6e-05	0.007	16.2	0.1	1	23	929	951	929	951	0.98

Sequence Information

Coding Sequence: ATGGAGGCGCACGAGACGGAGCAGTATGTGACGTTTCCCCTCGCCGACGTGCACGACGCCATAGAGGAGAACATAATATCGCACGAGGAGATATGCGAGCCCGTCGACGAGTGCGTTCTCCAGGAGGGCCTCACCGAGGTCACCGTCGGCAACACCGCCAGCAACACCGACATCGTAGAGACCCAGGGTACCGTCGAGATCCTTGCCGAGGAACAgtcggaggaggaggaggaggacgacaATCAGGTGGTGTATCCGATGTACATCAAGCAGGAGGAGCAGCAGCAGTACACGTCGGGCGACGACGAGTCCATGGCTGTGGAGGCACTGCGCCAGCTGGGCGGCATGTATCCGTGCTTCGAGGACAAGAAGATCAGCTGTCCGGTCTGCAAGCACCTGTTCACCCAGGAGGAGATGGTCGAGCATCAGACCGTGTGCCAGTCGTCGCCCAGGCTGTCCTGCACCACGTGCGGCGAGAGATTCGAGAGGAAGATCGACCTGAACAACCACATGGTTTGCCATCAAGTGGATCGTCCCCACGCGTGCAGAACGTGCGGCAATCTGTTCCGCTCCAAGAGCAGCTTGCAGGCGCACATGCTGCAGGTGCACATGCACCACGTCGAGCGGCCGCACAAGTGCACCATCTGCGGCTCGGACTTCCAGCGGCCCTCCAGCCTGTCGAATCACATGAAGATACACACGTACGTCGCGGGGCGTGCCATCATGCAGTCCCAAAGTAACAACATGCCTCAATCGGTGACGGAGACGTTCAGGAAGTGGCCGGAGAACGCGCCCGATTCGCAGAACACCGCTCAGGCGGTGCCATCCTCCTCGTCTGTCCAGTCGGTGCAGAACTACGACGTGTGCCAGGTCCAGTGGCCGGTCTCGTCGTACAATTTCAATAGCGAGCAATCGATAGTTACCACGATATCGAGCCAGGACACCAAGATGGATACGCTCCAGGAGTTCACGGTGATGCCCAACGGCGAGGTCACGCAATTCAGCGAGTACACCGAGCAAAACAATATCAACGATTCGGTCGGCAACAGTCAGCAGTACGATATAACGATAAATTCGTTCAACACCCCCGACGGCATAGTCAAAGTCGAGACGCTTTACCGATACAACAACACGAACAAACGAGACTACGGGGAAGCCGAAGGGACCAACGACAAGCCGTACGCGTGCAAGCACTGCGGAATGAATTTTTCACGCGCCACCGCTTTGGCGTCTCACGAGAAGATTCACGCCTCGAAAAATTGGAACATGCCGATCGAGTGCGAGTACTGCGACAAGCAGTTCCAGGACGGCAATCATCTGGCGAATCACCAGACCACCTGCGCCAAGAAGATAATGCAGAGCAACCTCGAGCAGGGTGTGCCGAACAACAAGTGGGGCAAGCACGCTTGCTCGGAGTGCGGAAAGAAGTTCACGACCAAGCAGAAGATGTTCCGCCACCAGTGGATCCACCGTAAGAAGACCCACTCCTGCGAGGTGTGCGGCTCGCAGTTCGAGAAGCAGAACGAGCTGGACGAGCACAGACTGTCGGCGCATCCCGGGGACTCGCCGTTCACCTGCACGGAATGCGGGAAGAGCTTCGTGTCGCGGCAGGGCCTCTGGGAGCACGGCAGAACGCACGCCGGCAGCCCGGCCCACTTTCAGTGCGACACCTGCTCGAAGACGTTCTCATCTCGCCAGGGATACCTGATACACAACCGCACGCACACCGGCGAACGGCCGTACGGCTGCAAGTTTTGCTGGAAGGCGTTCCGGGACGGCGGAACTTTGCGGAAGCACGAGCGGATTCACACGGGGGAGAGGCCGCACGTGTGCCCGTTGTGCTCGAGGGCCTTCAATCAGAAGGTCGTGCTGCGCGAGCACGTTCGATGGGTCCACGCGGCGGGGAAGAACGAGACGGAGGCGAGCCATCCTCCGTACCAGTGCCCGCTCTGCGGCGCCCTGAATCAGGATCGCGACGAGCTCTGCGCGCACATCGTCAAGCACTCGGATCAGATGATAGCCGAGGCGAAGGCGAAGAGTAACAGCGACGCGTCTCCGAAGACGAAACCGACGAAGAAGAAATCAAAGTCGTCGTCGAGCGGCGCGAACGCGCAGGCGAAGCAGGCGAACCTGGACTTCATACCGAAGGCGGAGCAAAACGAGGCCCTGCTGTCCATCACCGAGACGTCCGACAAATCGGACGACATGCACGTTATAAACGCAGAGAAGCAGAACAACGCGTTCGTTGTGGTCACTACGGAGAAGAGTAGCGACGGCTTCATCGCGATATCCGAGCTCAAGCACAGCAACATACGGTTCATCGTGGACGGCAAGGAGGACGAGAACATTCAGGTGCTTCGAGTGGAACAGTCGGATCAGAGGGACCCTCTCGAGATGATTGCCATCGATAAGCGTAACGACGCGACGAGCATCATGTCCGCGGAGTCCGTGGACGACGCGCTCGACGAGACGGTCGTCGGGCAAAACGACATGTCCACGATACACTTGATTCAGTCCCCCAAGCAGAACAACACcctaaatataatatcgaaGCAGAACGAGTCGCTCCCCGTGCTGGCGATACCGAATCCGCCGCAGGGCCACGAGAATTACTCCAGCCAGATCGTGCAGATAAGCGGCGCGGACATGCCTATGAGCGTCGTGACTCGGCAAGCCctgaaagaggaaaagaatcATATTCAGGACGAGCAGGACGCTCTAATCCCGGACGAAACGTCGCACGTTATTGTGCAGTATCATCACGACAGCGACGACGGGGACGATTTCGTCTGCGGAATCTGCGAGGAAAGATTCGACGGCAAGACCACGTTGAAGGAACACATCAAgatacacatataa
Protein Sequence: MEAHETEQYVTFPLADVHDAIEENIISHEEICEPVDECVLQEGLTEVTVGNTASNTDIVETQGTVEILAEEQSEEEEEDDNQVVYPMYIKQEEQQQYTSGDDESMAVEALRQLGGMYPCFEDKKISCPVCKHLFTQEEMVEHQTVCQSSPRLSCTTCGERFERKIDLNNHMVCHQVDRPHACRTCGNLFRSKSSLQAHMLQVHMHHVERPHKCTICGSDFQRPSSLSNHMKIHTYVAGRAIMQSQSNNMPQSVTETFRKWPENAPDSQNTAQAVPSSSSVQSVQNYDVCQVQWPVSSYNFNSEQSIVTTISSQDTKMDTLQEFTVMPNGEVTQFSEYTEQNNINDSVGNSQQYDITINSFNTPDGIVKVETLYRYNNTNKRDYGEAEGTNDKPYACKHCGMNFSRATALASHEKIHASKNWNMPIECEYCDKQFQDGNHLANHQTTCAKKIMQSNLEQGVPNNKWGKHACSECGKKFTTKQKMFRHQWIHRKKTHSCEVCGSQFEKQNELDEHRLSAHPGDSPFTCTECGKSFVSRQGLWEHGRTHAGSPAHFQCDTCSKTFSSRQGYLIHNRTHTGERPYGCKFCWKAFRDGGTLRKHERIHTGERPHVCPLCSRAFNQKVVLREHVRWVHAAGKNETEASHPPYQCPLCGALNQDRDELCAHIVKHSDQMIAEAKAKSNSDASPKTKPTKKKSKSSSSGANAQAKQANLDFIPKAEQNEALLSITETSDKSDDMHVINAEKQNNAFVVVTTEKSSDGFIAISELKHSNIRFIVDGKEDENIQVLRVEQSDQRDPLEMIAIDKRNDATSIMSAESVDDALDETVVGQNDMSTIHLIQSPKQNNTLNIISKQNESLPVLAIPNPPQGHENYSSQIVQISGADMPMSVVTRQALKEEKNHIQDEQDALIPDETSHVIVQYHHDSDDGDDFVCGICEERFDGKTTLKEHIKIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476432;
90% Identity: -
80% Identity: -