Waur010825.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- -
- Assembly
- GCA_000956235.1
- Location
- NW:691007-698097[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.015 1.1 9.3 3.1 1 23 412 434 412 434 0.97 2 19 0.0064 0.47 10.5 0.8 2 23 471 492 470 492 0.97 3 19 0.00093 0.068 13.1 0.8 1 23 559 581 559 581 0.93 4 19 0.0016 0.12 12.3 1.1 1 23 584 606 584 606 0.98 5 19 1.3e-05 0.00098 18.9 1.5 2 23 656 678 655 678 0.96 6 19 0.0025 0.19 11.7 3.1 1 23 683 705 683 705 0.96 7 19 0.00048 0.035 14.0 0.7 1 20 711 730 711 735 0.94 8 19 1.4e-05 0.001 18.8 1.3 1 23 809 831 809 831 0.97 9 19 0.00016 0.012 15.5 4.8 1 23 888 910 888 910 0.97 10 19 0.00021 0.016 15.1 0.7 1 20 915 934 915 936 0.94 11 19 0.00061 0.045 13.7 0.4 2 23 947 968 947 968 0.97 12 19 2.2e-05 0.0016 18.2 0.6 2 23 1007 1028 1006 1028 0.97 13 19 2e-05 0.0014 18.4 1.6 1 23 1033 1055 1033 1055 0.95 14 19 0.00084 0.062 13.2 1.7 1 20 1061 1080 1061 1083 0.93 15 19 3.5e-06 0.00026 20.7 0.4 1 23 1099 1121 1099 1121 0.95 16 19 3.9e-07 2.8e-05 23.7 0.6 1 23 1127 1149 1127 1149 0.98 17 19 3.1e-05 0.0023 17.8 0.2 1 23 1155 1177 1155 1177 0.97 18 19 0.018 1.3 9.0 6.9 1 23 1183 1205 1183 1205 0.96 19 19 0.0039 0.28 11.2 0.6 1 20 1211 1230 1211 1232 0.90
Sequence Information
- Coding Sequence
- ATGGACGCCGTGGAGATAAATACGTCGGGTCCGCCGCAGGGCGAGGACGCGGTCGCGCCCGCCGTGAAGATATGCCGCGTCTGCCTGCTCGACAACCCGATGATGCGCGACCTCTTCGTGGAGAGCGAGGTCGCGTCCCTCTCGGCGAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTCTACCGGCACAGGTGTGCTGCGTGTGCGCCGACAAGTTGGAGTCGGCGTATGAGTTTAAGTTGCAAGTGGAGCAGGCCGATAATGTTCTACGGGAGAGGCTCGTTGGAGGGATAATAAAGGAGGAGTTGTTTCTCAATGAGGTCGAGATACACTTGGACGCCGAGAGGAGCGACGGTTTGGACGAGATGAATGTCGGCGCGGATTACGAGACCACCGCCGCGCTGCCAGAAGAGTCGGTGGGTGACAAGAACAGCTTTCTGAAAAGTCACCTAATGATTTTGGAAGCTGAAAAGTTGGCGGAGACAGATGGCGTGCAACAAGATCCAGAAGAGGATAATCCGCAAGTGATCATGCAGGAGAGCATCGCGGACGAATTGCAGCAGGAATTGGCCAGTGCGGAAGACAACGATATGTCGGATGCTATTGACGATTTTAGAAACGACGGACCCTCCGGCGACGAGAATATCATTCGTAGTTGCACAGATGCAATTCCAACGGAGGAACATGATTATATTATGCAGCAACAGTGCATACTGTCCGCTGAGCAACTGTCCTTGCATAAAGATATGCAGAGGGGTGTACCGAAACTTGAACAAGTGGACGCAGTGGAATGCCAAGAGACACCATCCGAGCAAGACCGAGAGGCGCCATCCGAGGAGAATCAGGAGATTCAGGCTGAGCAAAACGAGGAGATGCAAGCTGAGCAAATTCAAGAGGTTTCAGCTCAAGAAATCCACGAGGCTCAGATCGAGCAGAACAAAGAGGCTCGAGTTGAACTAAAGCAGGAGGCTCTGCAGGAAAGTCAAGTTGAACAAAATCAAAATGACACGAAGGAAAAATTCTTCGAGGAAGATGCACCCCAAGCTGACGAGCCAGTAGTGGAACAGGAATCGTCCCAAAACGAAACTAGACGAAGTAAACGTAGATTGGCTCGTCGCACGTTCGCCGAGCGGGATTCCGACGAGGAGAATTACTTTGAAAATCTGAATCTCAGTTCTCGATTGAAGAAAGCACAGGCGGACAAGGCGGAGAAGATCTTTTTCATGTGCTACCTGTGCGACAAACAGTTTCTGTCGAAGAGCGTCCTGAAGGAGCATATGCATTCCCACGAAGAGGTGAGAAAGACGCTGTCCCTGAAGAAAACGCCGGAGAAACCGCAGAAGGCGCAGACCAGCGTTTCCGCCGTGAAAACGCCACCATCCGGGAAGAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAAATTCGTTTACTAAGCACATTAAGCAACACGAGCGAGAGCGGGAGGAGGCGAAGGAGGATCCGATGCCGCTCGAGGTATCGTTCCACGAGGACGAGCTCAGTCTGGACTTCGATAACGGCAATAGATCGGACGGCGAGAGCAGGAAGCGAAAACGGGGAAGCGCAGTCGACGACGCCGCGAGCGACAGCGATCAGGACAGGAGAAGAAAGCGCGGTCACGTCGAGGAGTTTGCGTGCGACAAGTGTACGGAAAGATTCGACACGAAGCGAGGCTTGCAGAAGCACTCGCTCGCGCATGTTACCTTCAAGTGCAGCGTGTGCGACGAGGAGTACGACACTCTGGAACGACTGAGAAATCACCGTACGAAGCACGTGGTCGAGGGTGTGCTTTCCGAGCAGGATTTGGAGGAGGACGTGAAACAGATGACGGCGAGGACCGTCGAGAACCACGGCGAGGACAACGGGAACGTCAAGGACGAGGAGAGCAGCGGTGATTTTGTCGAAAATACGAAGGAGCTGAAGTGTCCGACGTGCTCGATGACATTCTCGCGCAAGAAAACGCTCTCCAGACACATCGAGATGACGCACCCCGCGCGCTCCTACGAATGCAAGATATGCTGCCAACAATTCACGCGGAAGGATCTCCTGCGCAGACACGCCGAGCAGCACGCGCGGGTGAAAACCTACAAGTGCACCCAGTGCAACAAGACCTTCGGCAACGAGCTCACGCTGAGAAATCACCTAGTTGCCACGAATCACAAGACATTCGTACACGGACAGGAATACGATCCGAACAAGCGTATAAAGCGCGTGGCGGCGAGAGCGGCGCAGAAGATCATCGACAAGATCAAGACGGAGGACGGTCTCGAGGATTACGACGAAGATAACGACGACAATATCGATTACGATGCCAAACTGGACGGGCATTATCGCCGTAGGCGCGACTCCACACCAAAGAAGTACAGCCATAGGAAGGAGTTCGAGTGCGCGACCTGCAACAAGAGATACAGCTCGAAGCAGGCGTTGACGAAGCACATGGAGCAACATGTGAAGGAGGAGAAAGCGGAGAAGGCGGCGGAGAAGGCGGCGGAGAAGCTGAAGAAGGCCGCTCTGGAGAAGAAGGAAGTGCAGAGGGCGAGCAACGTGGGCGCGGacaacgatgacgacgataACGACTCCGACTTCGAGAGCGGCCTCGACTGGCCGATGGACAATCACGAGTGCAGCACGTGCAAGAAGCGATACAGCACGAAGAAGTCGCTGCTGCGCCACCAGCTGCTGCACGAGGAGCCGAACTTCGAGTGCGACATCTGCAACGTCAAGTTCTACCGCAAGGACAAGCTGAAGGCGCACTACGACAAGTGCTCGGAGAAGAATCCCGATCAGGTGAGGAAGTGCAACATCTGCGGCGACAGCTTCGAGAACAACGAGATGCTGCGCGAGCACAGGGCCAAGCACGTCACCGAGGGTATCTTAACGGAGGAGGATCTGAGGGACATCGAGCCGAGATCCGAGGAGAAGAAATCGGGCGAGAAGATCGGCCGGAAGAGGCGGACCGACATCGTCGGGCTCGAGTGCACCGAATGTAACAAACAGTACACCTCCAGGAAGGGCCTGCTGCGGCACATTCAGGTTCACGAGGGCAAGAAGTACCTGTGCGACATATGCCCGAAGAAGTTCTACCGGCGGGAGCACCTGAAGATCCACGTGGCCAAGCACAACATGGTCAAGCCGTACAAGTGTACCCGCTGCACGAAGCGCTTCATCAAGGAGGAGCAGCTCAACAATCATCTGCCCAAGCACGATCGCACGTTCAAGAAGAGCAAGGAGACCGACAGCTCGAAGAGATTCCTCTGCGAGATCTGCAGCAAGAGCTTCACGCAGTCGACGACGCTGATAGCGCATCTGCGCGCGCACAACGGCATCAAGCCGTTCGTCTGCGAGGTCTGCTCCAGGCCGTTCACCACCAACGCCTACCTGAAGATGCACatgcgcacgcacacgcaggAACGTCCGTACATCTGCCAGTACTGTTCGCgtgcgttcgcgcgcgccgaCACCCTGGCGAATCATCTGACGTCGCACACCGGCGAGGCCAAGTACCACTGCAAGTGCTGCCCGAAGAACTTCCGGCGATTGAAATCGCTGAAGGAGCACATGTTTATTCATACGGGTCAACGGCCGTACGAGTGTCCGACTTGCGACAGGAAGTTCAACAATAACGGCAGCCGCTACGCGCACAGCAAGCGCTGCAAGCAGAATCTTTTGCAGAACCAGAACCGGGCGCAGCAAATACAGATTCagacgcagcagcagcagcaacagcagcagcagcagcagcagcaacagcagccgCAACCGCAGCAAATACAGATACAGGTGCAGCCGCAACCGCATCCAGTCAGGTTGCATCAAACCGCAATCGGGGCACAAGTGGTCAAGGCACAGAACATCAAAACGATCGCTATAGCGAGGCAAGCCGACCCCACCACGGTGACGACGCAGCAAGTTATGCAGCATCAGGAGATACTGATGCCTCTAATCCTGCCGCTTACCGTCACCCTCGCTGACGTAGGCGAAGAGGTAATAATACCTGAGGGTACAAAGATATTCACCACCTCTTAA
- Protein Sequence
- MDAVEINTSGPPQGEDAVAPAVKICRVCLLDNPMMRDLFVESEVASLSAKAMSFANVKMLPGDGLPAQVCCVCADKLESAYEFKLQVEQADNVLRERLVGGIIKEELFLNEVEIHLDAERSDGLDEMNVGADYETTAALPEESVGDKNSFLKSHLMILEAEKLAETDGVQQDPEEDNPQVIMQESIADELQQELASAEDNDMSDAIDDFRNDGPSGDENIIRSCTDAIPTEEHDYIMQQQCILSAEQLSLHKDMQRGVPKLEQVDAVECQETPSEQDREAPSEENQEIQAEQNEEMQAEQIQEVSAQEIHEAQIEQNKEARVELKQEALQESQVEQNQNDTKEKFFEEDAPQADEPVVEQESSQNETRRSKRRLARRTFAERDSDEENYFENLNLSSRLKKAQADKAEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKPQKAQTSVSAVKTPPSGKKANKCPYCGKEYLYINSFTKHIKQHEREREEAKEDPMPLEVSFHEDELSLDFDNGNRSDGESRKRKRGSAVDDAASDSDQDRRRKRGHVEEFACDKCTERFDTKRGLQKHSLAHVTFKCSVCDEEYDTLERLRNHRTKHVVEGVLSEQDLEEDVKQMTARTVENHGEDNGNVKDEESSGDFVENTKELKCPTCSMTFSRKKTLSRHIEMTHPARSYECKICCQQFTRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFVHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDEDNDDNIDYDAKLDGHYRRRRDSTPKKYSHRKEFECATCNKRYSSKQALTKHMEQHVKEEKAEKAAEKAAEKLKKAALEKKEVQRASNVGADNDDDDNDSDFESGLDWPMDNHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEMLREHRAKHVTEGILTEEDLRDIEPRSEEKKSGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCTRCTKRFIKEEQLNNHLPKHDRTFKKSKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPFVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQIQIQTQQQQQQQQQQQQQQQPQPQQIQIQVQPQPHPVRLHQTAIGAQVVKAQNIKTIAIARQADPTTVTTQQVMQHQEILMPLILPLTVTLADVGEEVIIPEGTKIFTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126152;
- 90% Identity
- -
- 80% Identity
- -