Waur009080.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- -
- Assembly
- GCA_000956235.1
- Location
- NW:449544-513985[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.0078 0.57 10.2 2.6 2 23 340 361 339 361 0.97 2 37 0.00055 0.04 13.8 1.6 1 23 363 386 363 386 0.95 3 37 0.0015 0.11 12.5 1.5 1 23 391 414 391 414 0.97 4 37 0.00033 0.024 14.5 2.1 1 23 420 443 420 443 0.95 5 37 0.0018 0.13 12.2 2.0 2 23 450 472 449 472 0.95 6 37 0.0025 0.18 11.7 0.2 1 23 477 499 477 499 0.97 7 37 0.001 0.075 13.0 0.5 3 23 507 526 506 526 0.98 8 37 9.2e-06 0.00068 19.4 0.1 1 23 532 554 532 554 0.97 9 37 0.0014 0.11 12.5 0.4 1 23 560 582 560 582 0.97 10 37 3.3e-05 0.0024 17.7 0.6 2 23 685 706 684 706 0.95 11 37 0.006 0.44 10.6 3.7 1 23 708 731 708 731 0.97 12 37 0.034 2.5 8.2 3.6 1 23 736 759 736 759 0.95 13 37 0.00034 0.025 14.5 3.4 1 23 765 788 765 788 0.95 14 37 0.024 1.8 8.6 0.8 3 23 796 817 794 817 0.95 15 37 0.00025 0.019 14.9 0.2 1 23 822 844 822 844 0.97 16 37 8.7e-06 0.00064 19.5 0.1 2 23 851 872 850 872 0.97 17 37 6.6e-06 0.00048 19.9 0.1 1 23 878 900 878 900 0.98 18 37 0.0046 0.34 10.9 0.8 1 23 906 928 906 928 0.97 19 37 0.01 0.74 9.9 3.8 1 23 960 983 960 983 0.96 20 37 2.3e-05 0.0017 18.2 0.5 1 23 989 1011 989 1011 0.97 21 37 0.0078 0.57 10.2 4.4 1 23 1017 1039 1017 1039 0.98 22 37 0.0012 0.087 12.8 1.6 2 23 1046 1067 1045 1067 0.96 23 37 0.00018 0.013 15.3 2.6 1 23 1112 1135 1112 1135 0.95 24 37 0.51 38 4.5 1.0 3 23 1146 1166 1144 1166 0.95 25 37 1.3e-06 9.5e-05 22.1 1.1 1 23 1172 1194 1172 1194 0.98 26 37 6.7e-06 0.00049 19.9 1.1 1 23 1200 1222 1200 1222 0.97 27 37 5.6e-08 4.1e-06 26.4 0.5 1 23 1228 1250 1228 1250 0.99 28 37 0.93 68 3.7 1.1 2 23 1282 1304 1281 1304 0.96 29 37 6.3e-05 0.0046 16.8 0.6 1 23 1310 1333 1310 1333 0.97 30 37 6.1 4.5e+02 1.1 0.2 2 23 1339 1361 1338 1361 0.93 31 37 2.3e-05 0.0017 18.2 0.0 1 23 1366 1388 1366 1388 0.98 32 37 0.16 12 6.1 0.4 2 23 1393 1415 1392 1415 0.94 33 37 0.00011 0.0081 16.0 4.1 1 23 1434 1457 1434 1457 0.96 34 37 0.0044 0.32 11.0 0.1 1 23 1468 1490 1468 1490 0.95 35 37 0.074 5.4 7.1 3.8 1 23 1496 1518 1496 1518 0.88 36 37 5.5e-06 0.0004 20.1 2.3 1 23 1524 1546 1524 1546 0.97 37 37 0.00029 0.021 14.7 0.2 1 21 1552 1572 1552 1573 0.96
Sequence Information
- Coding Sequence
- ATGTCCTCCCTCGACTACCTGGACCTGTGCCGGCTGTGTCTCGTGAAGGACCGCGTCTCCGTGCCGATTTTCGGGGGTGAGGGAGACGTGCGGCAGATCTTCCTCAAGATCACCGCCTGTTTGCCGGTCAAGgTGAACAGAGAAGACAAATTACCTAAAAAAATATGCGATGACTGTGTGTATAAAGTAGAATTATGTTATCAATTTTGGCATACGACGGCGAATGCCGAGAAACAGTTGCTGCAATGGCTAGGCGATGTAAACATGGAAGACAAACAGGGTTACAATATTCTCAATCCGAACGGAATGAAGCCAGAACAGAGCAACGAGAACAGGTTAGATGGTACTGTGATGCAACAAGTAAGCGAACATCAGAACAATATGAATATGGGTATGATGGACAACATGGGTCTAAATATGCCCATGATGATGTCGAGCAATACCCAGCAACAAATAACCTCAGTTCCTATGGACAACAGTGGTAGCTCTGTACAAAATGTCCAACCAGTAGCTGGACCAAGCACACAAACGACACACGACCAAATTACACAAAATCAAACTGACGCGCCTACGCAacaagaggaagaagaggagagCAGTGAAGAGGATGAAAACTCGGACGATGAGTGCGATGGAGATGAAGgCCTACctataaaagaagaaagtgAAGAAGATCCTAATAATAGTAGAACTATAGAGCCTACGACATTTGTTAACGTTTCCTTGGCGTGCGACGAGGCAGGACCTTCTGGACTTCAGCAACAGAAGATTGCCGACATGCCCGAGATGGTAATGCAACAAACAGCAGATGTGGATCCGAAAACTGGAATGGATCCGTTGAATGTTGAATCCAATGTCCAAAAACCGTTCATCGGAATCAAATGCGAACGgacggaaagagaaaaatcgtTCACGGAACGCGAAGGACGACTGTTAGAAAAGATAAACGTGAGAGAGGAGCTTAATCCGCGGATCGTAACCGAGGAGAATCGGCTGACTAGAAAGAAAGCGTGTGTAGAGTGCGACCACTGTCGCCGCAAGTTCTTGAAGAAGAGCAACCTCGCTGAGCACCTGAAGCAGCATAGGCACAAGTGCGCCGACTGCCCGAAAACCTTCAGCCTACGGCGGTACCTGGTTTCCCACGTCGAGAAGAATCATCGGCAGCAGATGTACGAGTGCAGCGTGTGCAAGTACAAGAGCAACAACAAGGGCACCCTGAAGAACCACTACATCCGGCTGCACACGAGCAACTACGACTACGCGTGCGACACGTGCGGCAAGCAGTTCAAGATAAAGAAGGCCCTGAATCACCACGTGAAGCAGAACCACAGCGAGGCGCCGCCGATCGTGTGCGACGTCTGCGGTCACTTCAGCAAGAACCTCCACGCTCTCAAGGCTCACATGAAGTACCGGCACTACAAGCCCGAGTTCGTCTGCCGAATATGCCGACGAGGTATGACCACGCAGGAGAACTTGGAGCAGCATCTCATGTGGCACGAGACCAGGGAGAAGGTGCTCTGTCCGACGTGCGGCAAGAGATTCCGGGGACGCGATCTGGACTCGCACATGAGAGTGCACACCGGAGTGAAGCCGTTCCCCTGCCCTGTCTGCGGAAAGACATTTCGCCGGCAAACTGCTCAAGAGCAGCACGTGTTGATCCACACCGGAAAGAGACCCTACATTTGCGATATTTGCGGTCAAGCGTTCGCTCAGAAGCCCGGCTTGATCTGCCACAGGAAGAGACATCCTGGTCCATTGCCTCCGCTACCTGTAGTCTCCATTAAGAATATCGTTACTGAATTCACGAAAGAGTACGCGACCAAAAATACAGTCATAAAGATTGAATAtGATTCTCCCGTGGATCCTCTGAACGTCGCGGACGCCAATCATGCGGAACACTCGCCCGAAAGCATAGAATGCGTACCCGagtacaatttaatatcaaataaagtcAAACGACACATTGTTAGGAGAAGAAAAACGGGAGAGGACACGAGAAAGCAGAACTTCAGTCCGGACAAAATCGACAAGAAGAGGCCTAAACTTTCGCTGGAGTGTGCCACGTGCGGTAAACGTTTTAGCGAAAAATCTACCATGATAAAACACATGAGCCTTCACAAATACCAGTGCCAAACCTGCTGCCAGAGCTTCAGCCTGAAGCGAGAGCTGAAGCGCCACATCATGAACGTTCACGGGCCTCTTCTGTATCCTTGCAGCATCTGCGACTACAAGAGCAACAACAAGTGCACCCTGAAGGACCACTTCATACGGAAGCACACCAGCGGATTCCAGCACTCCTGCACGGTCTGCAAGAAGCAGTTCAAGATCAAGAACGATCTGAAGCAACACATGAATCAGGTGCACAGCGGCGAGCCGCCCATTATCTGCAGCATCTGCGGACACGCCTGCAAGAACGTGCCCGCCATCAAGGCGCACATGAAGTACCGACACTACAAGCCGGCCTACGAGTGCAAGATCTGTAAGCGCGGTCTCACCACGCAGGAGAACCTCGACCAGCACCTGATCTGGCACGAGCGAAAGGAGAAGGTCGTTTGTCCCACCTGCGGCAAGACCTTCGGTCAGAAGAGGGATTTGGATCTCCACTTGAGGATCCATCAGGGCATCCGGCCGTTCTCCTGCCCAGTCTGCGGCAAAACCTTCCCCAGGAAGACCGCCCAGGAGCAACACATATTAATTCACACCGGCAAAAAGCCGTATATCTGCGACATATGCGGAAATACCTTCGCGCAGAAACCCGGACTCATTTGCCACAGAAAACGGCATCCCGGACCGTTACCGCCGTTGCCTGTGGtatcaattaagaaaataataatggaCTTTACGCAGGAGCAACGACGGGGTAGATCGCGCGCGGTGCACCAATGCGTCAAATGCGGGGCTCGCTTCCGTCACACGCGGAAGCTCGTGGAGCATCTGAAGAATCTGCACAACATCGACCGGGCGTTCAGCTGCGACGAGTGCAACAAGACGTTTCGCAGCCCGATGAACATAGCTCGCCACAAACTGATTCACACGGGGCTGCGGGTGTTCACGTGCGATCTCTGCGAGTACAGCACCAACCAGAAGTCCAATCTGGAGTGCCATCGTCGCCGGCACGCGAAGGACTACAGCCTCAAGTGCGAGACGTGCGGCAAGGGCTTTTTCCACAGGACCGAGTACCTGGAGCACCAGAACGCGCATACGAACAAGAATCTGTATCGCTGCGAGCATTGCTGCAAGCATTATCTGTACAAGAAGAACCTGTCGGTGCACCTGGTGACGCATCACGCCGGCAAGCAGGCCGCCGCGGTGGCGAGGGGCGCGAGGACGAGGCACGCGTGCAAGTTCTGCCCGGAGAGATTCGTGTACAAGCGGCTGCTGGAGAGGCACATGAAGAACCAGCACGGATTCGCGGACGCGCCGGCGAAGCACCTGTGCGACCTGTGCGGCGCGGAGCTGTCGTCGATGAGACGACTGACGGTGCACAAGCGCAATCACGCGGGTGAGAGACTCTTCGAGTGCGACACGTGCGACAAGAGGTTCGCCAGCAGGGAGAACCTGAGCATTCACAAGCGGACGCACACGGGCGACAAGCCGCACGTGTGTCCGCAGTGCGGCCGCGGTTTCACGCAGAGGACGTCGCTGGTCCTGCATCTGCGGTATCACTCGGGACAGAGGCCCTACCAATGTCCGGACTGCGGCAAGGGATTCGTGTCCAACACCTTGCTCAAGAGGCATCGCAAAGTGCACGAGAAGGCGACCCAGTGGACGAATAATCACGATTTGAAGGTGAAGAACGGGGACTTGCTTGATCTCGGACAGAAattCGAAGGTGGCGAGAAAACCTGCGAGTTCTGCCAGGCAAAATTCCACTTCGTTACGAGACTGGTCGCGCATTTGAGGATAGCGCACGGTATTCATCGGCCCTTCAAGTGCGTCACTTGCGGCAAGAATTATCCCCAGCAGTTTATGCTTAACGCCCACGTGAAGAAGTGGCACACGCCGAGGACCGTGCCATGCAATCAGTGCAGCTTCATGGGTGTCAGCGTGACCGATGTGGAGAAGCACAAACGGCAACGTCATCGAGATCCGAAATTCACATGTGAGATTTGCAACGAGGATTTCGCCGATAAGGACGCTCTGATTGCGCATACAGCGACGCACGATTCTGTGCAGCGATGCAACGCGTGCGATAGCATCTTCAACGACGTATACAGCTTGAAGGAGCACAATCGTCTCTACCACTACGATCCTGCGTCGAACGAGAGGTTTGAGCAATCCAGCGAGAACGAGTCCGAGCACAAATGCGACGTTTGCAATAAAGTCTACAAGTACAAGTCGATGCTGAAGCAGCACAAGATCAGGACTCACGGTGACCGGTCGAACTACGAGAGACGCAAATACCTTTGCGCGTTGTGCGGCAAGGAGCTGAAGACCGCGAAAGGCCTCGAAATTCACAACAGGTCGCACACCGGCGAGAAACCGTACACCTGCGAAGTGTGCGGCAAGTGTTTTGCCTGCGACACTATGCTTAGGACCCACAATGTCACCCATACCGGAGAACGGAAGCACTCGTGTGATCAATGCGGCAAGGCCTTCACTCAGAGATCCACTCTGGTTGTTCACAAGCGATATCACACAGGTGAACGACCGTACGTTTGTCCTCGGTGCAGTAAGGGTTTCGTCACACGAACTGTCCTTAATACTCATATGAAGTCCTGTCGTTGA
- Protein Sequence
- MSSLDYLDLCRLCLVKDRVSVPIFGGEGDVRQIFLKITACLPVKVNREDKLPKKICDDCVYKVELCYQFWHTTANAEKQLLQWLGDVNMEDKQGYNILNPNGMKPEQSNENRLDGTVMQQVSEHQNNMNMGMMDNMGLNMPMMMSSNTQQQITSVPMDNSGSSVQNVQPVAGPSTQTTHDQITQNQTDAPTQQEEEEESSEEDENSDDECDGDEGLPIKEESEEDPNNSRTIEPTTFVNVSLACDEAGPSGLQQQKIADMPEMVMQQTADVDPKTGMDPLNVESNVQKPFIGIKCERTEREKSFTEREGRLLEKINVREELNPRIVTEENRLTRKKACVECDHCRRKFLKKSNLAEHLKQHRHKCADCPKTFSLRRYLVSHVEKNHRQQMYECSVCKYKSNNKGTLKNHYIRLHTSNYDYACDTCGKQFKIKKALNHHVKQNHSEAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFVCRICRRGMTTQENLEQHLMWHETREKVLCPTCGKRFRGRDLDSHMRVHTGVKPFPCPVCGKTFRRQTAQEQHVLIHTGKRPYICDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKNIVTEFTKEYATKNTVIKIEYDSPVDPLNVADANHAEHSPESIECVPEYNLISNKVKRHIVRRRKTGEDTRKQNFSPDKIDKKRPKLSLECATCGKRFSEKSTMIKHMSLHKYQCQTCCQSFSLKRELKRHIMNVHGPLLYPCSICDYKSNNKCTLKDHFIRKHTSGFQHSCTVCKKQFKIKNDLKQHMNQVHSGEPPIICSICGHACKNVPAIKAHMKYRHYKPAYECKICKRGLTTQENLDQHLIWHERKEKVVCPTCGKTFGQKRDLDLHLRIHQGIRPFSCPVCGKTFPRKTAQEQHILIHTGKKPYICDICGNTFAQKPGLICHRKRHPGPLPPLPVVSIKKIIMDFTQEQRRGRSRAVHQCVKCGARFRHTRKLVEHLKNLHNIDRAFSCDECNKTFRSPMNIARHKLIHTGLRVFTCDLCEYSTNQKSNLECHRRRHAKDYSLKCETCGKGFFHRTEYLEHQNAHTNKNLYRCEHCCKHYLYKKNLSVHLVTHHAGKQAAAVARGARTRHACKFCPERFVYKRLLERHMKNQHGFADAPAKHLCDLCGAELSSMRRLTVHKRNHAGERLFECDTCDKRFASRENLSIHKRTHTGDKPHVCPQCGRGFTQRTSLVLHLRYHSGQRPYQCPDCGKGFVSNTLLKRHRKVHEKATQWTNNHDLKVKNGDLLDLGQKFEGGEKTCEFCQAKFHFVTRLVAHLRIAHGIHRPFKCVTCGKNYPQQFMLNAHVKKWHTPRTVPCNQCSFMGVSVTDVEKHKRQRHRDPKFTCEICNEDFADKDALIAHTATHDSVQRCNACDSIFNDVYSLKEHNRLYHYDPASNERFEQSSENESEHKCDVCNKVYKYKSMLKQHKIRTHGDRSNYERRKYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACDTMLRTHNVTHTGERKHSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCSKGFVTRTVLNTHMKSCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00730220;
- 90% Identity
- -
- 80% Identity
- -