Basic Information

Gene Symbol
NCOR1_1
Assembly
GCA_000956235.1
Location
NW:1762848-1799997[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-07 0.00027 20.4 0.0 3 43 544 584 543 587 0.96
2 2 1.6e-15 1.3e-12 47.0 0.4 3 45 990 1032 988 1033 0.95

Sequence Information

Coding Sequence
ATGCCGATGCTCCGCTACATTCATCCTTACCCGCCGTCGACCTCGGGGTCGACGCCGGCGGTGACGGCGGTCGTCACCACCGCACCGTCGCTAACTGCACCCGTGCCTGTGCCCGTGCCTGTGCCCGTACCTGCGCCCGTACCTGCGCCCGTTTCCGCACCATCTCTCAGTCAACCTACTGTCATCACCAGCcaaacgccgccgccgccactcaTCGGGACTCCCTACGCGAGAGACACGTACCGTGCCGGCACTACGAACgTGAACGAGAGGCTCGCCATCAACGTGAGCAACAGTTCGCTGTCGCAAGTTGGTGGGGTTGGTAGTGTCGGGGTAGTGCCCGCGCCGGAGTACAGCAGTATGGGAGCCGGTGGCAGAGGCGATCGGCAGAGGATATCCCTCTTGGGCTCTATACCGTCGCCTTCCGCCGTCACCGCATCGGACTACCAGCAGCATCCGGCGGCGACGAGAAACCCGCCGCGTATAGGCCTCATGCCCGTCCAGCCTGATCAGTATTGCAgtcgcacccccgtcgacaTGTCCAGTCTGCAGCAGGATGCGCCACCCTTCAAGAAGATCCGTCTGGGACCGCATCAGCAGGTTCAGCAGCTGCAATCGCAGCCTCAGCCGCGCTGCCTATCGCCCGCTGATCCATGTGGGGGCAAGCAagaacagcagcagcaacatgTCGTACAGTTGCAACAGCCACTTAGGATAGACACCAGGCCTGCTGTGGGAGCGTACACGCCGCAAACGGAAGCTATTTCGCCTACGCTTCCAGAACCGAATACGCAGGAGGATGCACAATATAGGAGTACCAAGGATGATCTCTTGCAGCAGATTGGCAAGGTCGACAGAGAGATCGCTAAGAGAgagaatcaattaaatatgttgCGGAAGAGGTTAAAAGAACTGGAAGAAACGGCAAACAAGCCTTTAGAAGTAAAAGACACTGAGGAACAGTCACAGCAACCAAAGCATCAATCGATGGCGCAAAAGGTCTACGCTGAGAATAGgAGAAAGGCAGAAGAAGCTCATAGACTTTTAGAAAGACTGGGCCCCAAAGTAGAACTACCTTTGTATAATCAACCGTCGGACACAAGCGTATACCAAGAAAATCGTACGCGGCATCAGACGTGTATGCGTGCTAGACTTATAGCTAGGCTTCGGAGGGAACATTCTGAGCGCGCGTCCCTTCATCGGCAGCAGTCGCAAACGTACGCCATTTTGGTTCAAGAGTGGCATCGCAAGGTGGAACGGCTAGAGGCAACGCAGAAGAGGAAATCGAAGGAAACAAAGAATCGCGAGTTCTTTGAGAAGGTATTCCCCGAGTTGCGAAAACAGAGGGAAGACAAGGAGCGTTTTAACAGAGTTGGTGCTCGCATCAAGAGTGAAGCCGATCTTGAAGAGATAATGGACGGTCTACAAGAACAAGAGGAAGAAACATtgcaagatttaaaaaattccattaaaGCTCGTCAGATGGAGGATAAGAAAATGCGTTCGTATGCAGTCATACCACCTCTATTGTTGGACGCGAAGCAACGAAGGATCGCGTTTCAAAATCGGAATGGATTACTTCAGCCAGAGGAATTAGAAGCTCTACATAGTGAACGTAAATTGATTAATGTATGGAGTTCGGTGGAACACGAATTATTCAAGGAAAAATATCTTCAGCACCCTAAGAACTATGGAGTGATAGCTCAATCGTTAGAACATAAGTCCGTTCCAGATTGTGTACATCACTACTACCTCACTAAGAAagcagaaaattataaacagcTTCTACGAAAATCGCGCCAACGGACACGTAGCTCTCGGAATAATCCGAATAATAAAGTAAATAATGCCAGTTCGACTATTGGACCTATAGATATTTTAACGACAGGCGTAACGACAAGGTTACAGCGGGAGCAGCAACAGAAGACTCAGGAAAATCCTCAGAATAGTTCGGCAACGTCTACATCTACAACGAGCACCACGGTCACATCGAGCGTATCGTCGACAACTGTCGCGAGCACGACagtaacgacgacgacgactccCTTGAGCTCGATAGCGTCGGGCGTTAGCGTAACGGATTCTGTAACGGCAtcaacgacaacgacaacgacatCTGTCCTGAACACCACCGCGACGTCGAGCAGCAtctcgacgacgtcgacgacatCCAGCGTGAAGGATTCCAGGGAGTCTGGCAAGGAGAATAAAGAGAATAAGGTCGATCCGAAGGAATCTCATCTTATAAAAGTAGAACCGAAAGAAGAACCGCTATCGGACGCATCGGGGAAGGACGTTAAAGTAATAGTGGAAGGGAAAGGTGCGCTATCATCGTCCGTGTCTTCGTTAAACAACGCGACGAACGTTTCGACCATCCAGACAGACTTCAAGGAATCCAGTAAAAAGAAACCGGGTTGCAGGGACACGAGCAGCAGTGGCGCTAATGTGGCAGCTAGTGGTAGAATAAAAgataagaagaaagagaatCACATGGAGACCAGTGACGAGGAAGCGCCGGCGATCGACGTCATCGAAGGTGGCAAACAGATAGGACCTCACGCTTGCACGGTGTGCCAAAGCGTCGTCGAGGGAAGCGCGCATAGTCGCGCGTTACCACGTAGCCAAGCGTCGCAGTATGGCCTGCGGGAAGACCAAGTGCCTCCTGGTGCGCGCGTTTGCAACACCTGTCGCTGCAAGGCCGTCCGAGGACGTTACACCGCCTGCCCATTACCGGGCTGTCCGAATCTGAGCAGCTCGAAATCGAGAGTAAAGCGGCTGAGAGCGTTGCCCTCCAAGTGGCTCGACTTGCCACCGGAGATTCGGGAGCCAATCGCTCAAGAATTCCAAATACCTAATAGCGCGACGAAATGCTGCTCGGCCTGCTTCAGTCGCATATCGCGCCGTTTGGCACCGCATCTCGCCGGCGGTACCGAAGTGTCCGAGGACGGCACCGATGCGTTGTCACGTCAGTGGACGGACGAGGAGCTCGAGCAACTCCGCAGGGCGCTTCGGGAACACGGCACCAATTGGCCAAAGGTCGCCGAGCAGATACCCGGCAAGACGAATCATCAGtgcaaaaactattattttgcTTACCGAAAGAAATTGAGTCTCGATCAGGTCGTGGCCGAGTACTACGCTTCACTGGGCGAGGAACGGAGACCATGTCTGACGGACGAGGAGGAAAGCGGCAGTAGTACTAGCAGCTGCGATGAATTGGCTGTTCATGATTCGAGTGACACAGCGAGCGCAGGAAGTCCGGCAACGAATATAACGGGCAGTAATGCAGCATCAAGTGGTACTGCGGCGACATCGTCGTCATTACCAACGATCCATTTCCAACGATCCAACGAGCAAAAACTCGGCGAGAAACTCTCGGATATAGCCGTAGTATCACTTGTACCACCCTCGTCTCATCAGTCTTCCAGTAGCGGAACTGCCACTGCATCTGGTGGCAGGGAAGATTACGACAGTTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACTTAGATAATGGCAGTGTCGTGGTAACTCTGACAACCCCCATCAGTAACGCAACATCGTTGCAACAACAGAATCAACAACAGAGCCAGCATCCACAGCCACCACCAATTGTTCACTCGCCACCTTCAACAACGAGTAATTCGAATCCGCTCACTGTCAAGGATCTTATGCTTGGAGTCATCGAGATGCAATTAAAACGCACTTCCAACAGTCCAGCTGACGGTGGCAGTTCATCAGCACCCAATAGCTCTAGCACTCCCACGATATCTAGCATCTTGAAGACAGATCCTCGTAACGACATAACATACGTTCGTGGCTACAAATCGTCATCAAACAATACCACGTTGTCTAATAGAGATTCAAATCTAGCAACACTCTCTGTTGTCTCGGGGCCTCATCATGCTCATCGTTCTGCTCCCAGTCCGCAACCAATTGGCCAGATACAGGCTACTATTACTCCTTGCCCACCAACTGTGCCGAGTAGTCAAGCTTCATCGTCGGACCTGCTGCCTAAGGAAGGTTTAGTCGTTATGCAAGTGCAACAAGCACTCCGAGAAAGCACGGAAGGGACATTGGATTTGAGTATCAAAAAACCAAGACAACAGGATTACAATCATTCAATGCAGCTTCACAAGCCACCGACGGTTACGCTCTATCGACCGGAACCGCCGCCGGGCGCGTATTACCATCCTCACGCACCTCATCCCGAACAAGGACGTGGCGCGAAGAGTCCATTGATTTATGCTTCGTCACCGCGACCGCAGGCACCCATTACACCTAAGCTGAACAAAATCACCGGGGTACCACCGCCTCATCCCAAGCTGTCTCCAAAATTGAGCAGCATGGGCACGCAGGGTCACAAAGGTGGTTCCATTACGCATGGCACTCCTGTATCTACGGCGCGTTACGAAGGTCTGTTGCGGCAAATGACACCGCCCGGTAATCCAACGGTTACCGGTGCCGCTTCGAACGCTAGTGAACGAGGCGGCGTTATCAATACCGGCTCCGCTGTTCCAGGGACACCGAAAGATACAGGTGGATCGATCACTCAGGGTACACCGGTGCTTCCGTTCGCGGTAGACAAACGCGGCACGCCCATATACGATTATCATCGCACCATCCGACACTCGCCTGGCAACGttccaccgccaccgccgggACAGGGTCCCACAAGCCAGGCGCCGTCGCCGGCCGTGGTAGTCAGTCACGGCGGCAGCCAGTACAATTCTTATTCCGCCTCCGGACGGCCACCGCCAAGTTACTCGATGGAGCAACAATTATCCAGTCGGCAGATCATCATGAACGACTACATCACAAGTCAGCAGATGCATGCGCGTGCTCGTGGTAGCAGTAGCGCCGGTGCATCCGTCGTTGCTGAGACAACCGGTAAAAGCgagccgccaccgccaccatcGTCCACCCTGTATTACACCAGTACGCCTCCTCCATCGCAGACGCATACGCAGCCGCGGCAAGGTGTCATCCAGAGGCACAATACGCAGAAGCAAATGCACTATCCACCGCCACCTGGCCTGGAGGCGTTCTCCAGTTTAGTGGATGTGGCAGTACAGCAACCCAGTCTTCCGGTACCACATCCGCATGGCCATCCAGCTGCGTCCGGTAGTAGCGGCCACGAGGGACTCGGTAAAACGATGGCGGATCGCTTGTTGGCCGACCGTTATGACAATAatcgcgcgtttcgcgagcAAGAGATACGGCTACAGGAACATCGTATGGCGATGCAAGCTGCGGAACACAGActagcggcggtggcggtgcaTCAACGCGATCGAGATAGAGACCTTCATCTGCGGGAAAAGGAGGAACATCGTTTGCATCGTGAAAAGGAATTGCAACATTTGGAACACCGTCTTGCGGTACAGCATCATCAGCAACGTGAAAAGGATCTTCAGCAGGAGCACCGTCTCGCGCAGCAGCGGGAGAAGGACATGCACGTCGAGCACAGTCGTTTATCTGTGCAGCAAGTCCGGGAGAAGGATATTCAACACGAGCATCGACTACAGCGGGAAAAGGAGATACAACAAATGGTAGCAGCTGCGGCGCAACGAGAGAAGGAGCATGAACATCGACTGGTAGTACAACAGCAACGAGAGAAGGAGATGCAGCAGCAAGAGCGGCTCGTCATTCAACAACACGAGAAGGAACACGAACGTCGTATGGCTATGCAGCAAGCACACCGCGAACGGGATCTCCAGGTGCATCTCCatcaacagcagcagcagcaacaacagcatATTCAGCATATTCAGCAGCAACGCATGGAGGCCGAGAGAAGACACATGGCGCAACTATACAGAGATCAACAACAAATTGACAGAGATTCGTCGAGATTAGCGAGCCTCGGATTCTCCTCGCAACCTTCCCCAATCAGGCTTCAGCAATCTCAACAGTCTcaacaacagcaacagcagtCGTCGTCAtcttcatcatcatcatcgcgACAGAGTCAATCTTCCAGTCAGCAAAACGACTCGTCGACTCTCACAGCTGCCAGTCTAATTGATGCTATCATCACTCATCAAATCAATCAGCCAGCACGTACTGATAATGCCAATGCAAGCGGATCCTCAGCCAATCAGCCAGCGCGTGCTGGCGATCGTCTTTTTCAGGGATTTCATCGAGAAATTCAGCAAGAACCTAATGGCATAGCCCACAGCCCCGCCGGTGAAGGCAGTGGCGGTGGAAATGGTGGAAGCGGCAACGGAAGTGGCGGCAACAAAGCAATCACTCTCGGCGAGCATGTTGATCATATTGTCTCTAAAGATTATGGCCCGCCTCATTCGTCGTATAGATCCTATACTGGATATCAAATTTCCGAAGATCAGTGGAAGAGACGAAAACTTAATGAGACGGACTCGGTGAAGACCGGGGACGAGCGTCAAATAATACGTGTCGCGCAACAACAGCACAcgcagcaacaacaacaacaacaacaacagcatCAGTCATCGGGAAAGCAGCAATATCATTCGGTCGAGCCGGTTTCACCGCCGGAGGCAACTACCAATCATTACGCACGTCGCTTGTACGATTCGAGCACTGCCACATCCACTTCCGGAACTCCCTCCAACAAGTCGCATTCGACGCAGATATCGCCACTCGATTACGTGAAGAACAGGATCGTCGAGTGTATGCGCACTGAGGACGaagccggcggcggcggcagcggcagcgatGGTGGTGCGGGTGCCGATAGAAACGGGAGTGGTAATTCCGTCGTTGTGTCCGAGAAGGATGAAAAGGGAGGAAATAATGCGGAAAGAAGCGTGGAGAGAAGCCTGTCGAGtagtggtggcggcggcggcggcggcggtagcggaagtggcagcggcggcggcggcagtagCGGAAGCAATGAGATGGTGGTCGACAATGCGGGTGGACCGAATCCAAGCACTCGTgaacaacaacaacagcaacCACCGTCGCCGCCTGCGCCCGCAGCTACCACCACGTTCTATCCATTTAGTGCGCTAGGGGTGCACACGGGACCACCGCCGGCCCCACCACCCACCACAGCCACGTCCGCCTCTGTAACGAAATCGGAACAGATGCAGGCCGAGCCGGCCCCGTTGCTCTCCTCGCAATACGAGCCGCTCTCGGATGAGGATTGA
Protein Sequence
MPMLRYIHPYPPSTSGSTPAVTAVVTTAPSLTAPVPVPVPVPVPAPVPAPVSAPSLSQPTVITSQTPPPPLIGTPYARDTYRAGTTNVNERLAINVSNSSLSQVGGVGSVGVVPAPEYSSMGAGGRGDRQRISLLGSIPSPSAVTASDYQQHPAATRNPPRIGLMPVQPDQYCSRTPVDMSSLQQDAPPFKKIRLGPHQQVQQLQSQPQPRCLSPADPCGGKQEQQQQHVVQLQQPLRIDTRPAVGAYTPQTEAISPTLPEPNTQEDAQYRSTKDDLLQQIGKVDREIAKRENQLNMLRKRLKELEETANKPLEVKDTEEQSQQPKHQSMAQKVYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTRHQTCMRARLIARLRREHSERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEETLQDLKNSIKARQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNYGVIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNASSTIGPIDILTTGVTTRLQREQQQKTQENPQNSSATSTSTTSTTVTSSVSSTTVASTTVTTTTTPLSSIASGVSVTDSVTASTTTTTTSVLNTTATSSSISTTSTTSSVKDSRESGKENKENKVDPKESHLIKVEPKEEPLSDASGKDVKVIVEGKGALSSSVSSLNNATNVSTIQTDFKESSKKKPGCRDTSSSGANVAASGRIKDKKKENHMETSDEEAPAIDVIEGGKQIGPHACTVCQSVVEGSAHSRALPRSQASQYGLREDQVPPGARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPSKWLDLPPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLAGGTEVSEDGTDALSRQWTDEELEQLRRALREHGTNWPKVAEQIPGKTNHQCKNYYFAYRKKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPATNITGSNAASSGTAATSSSLPTIHFQRSNEQKLGEKLSDIAVVSLVPPSSHQSSSSGTATASGGREDYDSSATETADEGQGGADLDNGSVVVTLTTPISNATSLQQQNQQQSQHPQPPPIVHSPPSTTSNSNPLTVKDLMLGVIEMQLKRTSNSPADGGSSSAPNSSSTPTISSILKTDPRNDITYVRGYKSSSNNTTLSNRDSNLATLSVVSGPHHAHRSAPSPQPIGQIQATITPCPPTVPSSQASSSDLLPKEGLVVMQVQQALRESTEGTLDLSIKKPRQQDYNHSMQLHKPPTVTLYRPEPPPGAYYHPHAPHPEQGRGAKSPLIYASSPRPQAPITPKLNKITGVPPPHPKLSPKLSSMGTQGHKGGSITHGTPVSTARYEGLLRQMTPPGNPTVTGAASNASERGGVINTGSAVPGTPKDTGGSITQGTPVLPFAVDKRGTPIYDYHRTIRHSPGNVPPPPPGQGPTSQAPSPAVVVSHGGSQYNSYSASGRPPPSYSMEQQLSSRQIIMNDYITSQQMHARARGSSSAGASVVAETTGKSEPPPPPSSTLYYTSTPPPSQTHTQPRQGVIQRHNTQKQMHYPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPAASGSSGHEGLGKTMADRLLADRYDNNRAFREQEIRLQEHRMAMQAAEHRLAAVAVHQRDRDRDLHLREKEEHRLHREKELQHLEHRLAVQHHQQREKDLQQEHRLAQQREKDMHVEHSRLSVQQVREKDIQHEHRLQREKEIQQMVAAAAQREKEHEHRLVVQQQREKEMQQQERLVIQQHEKEHERRMAMQQAHRERDLQVHLHQQQQQQQQHIQHIQQQRMEAERRHMAQLYRDQQQIDRDSSRLASLGFSSQPSPIRLQQSQQSQQQQQQSSSSSSSSSRQSQSSSQQNDSSTLTAASLIDAIITHQINQPARTDNANASGSSANQPARAGDRLFQGFHREIQQEPNGIAHSPAGEGSGGGNGGSGNGSGGNKAITLGEHVDHIVSKDYGPPHSSYRSYTGYQISEDQWKRRKLNETDSVKTGDERQIIRVAQQQHTQQQQQQQQQHQSSGKQQYHSVEPVSPPEATTNHYARRLYDSSTATSTSGTPSNKSHSTQISPLDYVKNRIVECMRTEDEAGGGGSGSDGGAGADRNGSGNSVVVSEKDEKGGNNAERSVERSLSSSGGGGGGGGSGSGSGGGGSSGSNEMVVDNAGGPNPSTREQQQQQPPSPPAPAATTTFYPFSALGVHTGPPPAPPPTTATSASVTKSEQMQAEPAPLLSSQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476854;
90% Identity
iTF_00181237;
80% Identity
-