Basic Information

Gene Symbol
NCOR1
Assembly
GCA_001594115.1
Location
NW:690523-724275[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-07 0.00022 20.5 0.0 3 43 417 457 416 460 0.96
2 2 1.3e-15 1.1e-12 47.1 0.4 3 45 868 910 866 911 0.95

Sequence Information

Coding Sequence
ATGGGAGCTGGTAGCAGAGGCGATCGGCAGAGGATATCCCTCTTGCCGCCTGTCGGCTCTTCGGTGACTTCTATACCATCGCCTtctgccgccgccgctgcaTCGGATTACCAACAACATACGACGACAAGGAATCCGCCGCGAGTAGGCCTCATGCCCGTCCAGCCTGATCAGTATTGCAGTCGCACCCCCGTCGACATGTCCAGTCTGCAACAGGATGCGCCACCTTTCAAAAAGATCCGTCTAGGGCCACATCAGCAGATCCAGCAGCTGCAATCGCAGCCTCAGCCACGTTGCCTATCACCCGCGGACCCATGTGGAGGCAAGCAAGAACAACAACAACATGTTGTGCAGTTGCAACAGCCACTTAGGATAGACACCAGGGAGCAGCCTGCCGTGGGAGCGTATACGCCACAAACGGAAGCTATTTCGCCTACGCTTCCAGAGCCGAGTACGCAAGAGGATGCACAATATAGGAGTACCAAGGATGATCTTCTGCAACAAATTGGCAAGGTTGACAGAGAGATTGCTAAGAGGgagaatcaattaaatatgttgCGAAAGAGGTTAAAAGAATTGGAAGAAACAGCGAATAAGCCTCTAGAAGTAAAAGACACTGAGGAACAGTCACAGCAACCAAAGCATCAATCGATGGCGCAAAAGGTCTACGCTGAGAATAGgagAAAGGCGGAAGAAGCTCATAGACTCTTAGAAAGACTGGGCCCCAAAGTAGAACTACCTTTATATAATCAACCGTCGGACACAAGTGTATACCAAGAAAATCGTACACGGCATCAGACGTGTATGCGTGCCAGACTTATAGCTAGGCTTCGGAGAGAACACGCTGAACGCGCGTCTCTTCATCGGCAGCAGTCACAAACGTACGCAATTTTGGTTCAAGAATGGCATCGTAAGGTGGAACGGTTAGAAGCAACGCAAAAGAGGAAATCGAAGGAAACAAAGAATCGCGAGTTCTTTGAGAAGGTATTTCCCGAATTGCGAAAGCAGAGGGAAGATAAGGAGCGTTTTAACAGAGTTGGTGCTCGTATTAAGAGTGAAGCCGATCTTGAAGAGATAATGGATGGTCTACAAGAACAAGAgATGGAAGATAAGAAGATGCGTTCGTATGCAGTTATACCGCCTCTATTATTGGATGCGAAGCAACGAAGGATCGCGTTTCAAAATCGGAATGGATTGCTCCAACCAGAAGAATTAGAAGCTCTTCACAGTGAACGTAAATTAATCAATGTATGGAGTTCGGTGGAGcacgaattatttaaagagaaatacCTTCAACATCCTAAGAACTATGGAGTGATAGCTCAATCGTTAGAACATAAGTCCGTTCCAGATTGTGTACATCACTACTACCTCACtaaaaaagcagaaaattataaacagcTTTTACGAAAATCGCGCCAACGGACACGTAGCTCTCGGAATAATCCGAATAATAAAgTAAATAATACCAGTTCGACTATTGGAcctatagatattttaacgaCAGGCGTAACGACAAGGTTACAGCGGGAGCAGCAACAGAAGACTCAGGAGAATCCTCAGAATAGTTCGGCAGCGACTACGTCTGCATCCGCAACGAGCACCACAGGCACATCGAGCGTATCGTCAACAACTGTCGGAACCACGACAgtaacgacgacgacgacttCTTCGAGCTCGATAGCGTCGGGCGTTAATGTAACAGCGGATTCAGTAACGACATCAACGACAACGACGATGACATCAGTCCCGAACACCACCGCGACGTCTAGCATCTCGACAACGTCGACAACGTCTAGCACGAAGGATTCCAGGGAGGCGAGTAAGGAGAATAAAGAGAACAAAGTCGATTTAAAAGAATCTCATCTCATAAAAGTAGAGCCAAAAGAAGAGTCGCAATCGGAGTCTACGTCGGGGAAGGACATTAAAGTAATAATGGAAGGGAAAGGCGCGCTATCATCGTCTGCGTCTTCGTTGAACAACGCGACGAATGTTTCGACCATCCAGTCAGACTTCAAGGAATCCAGTAAAAAGAAACCAGGTTGCAGAGACACGAATAATAGTGGTGCTAATGTGGCAGCTAGTGGTAGAATAAAAgataagaagaaagagaatcATACTCCTATGGAAACTAGTGATGAAGAGGCACCATCGATCGACGTCATCGAGGGTGGCAAGCAGATAGGACCTCACGCTTGCACGGTGTGCCAAAGCGTCGTCGAGGGAAGCGCGCATAGTCGCGCGTTACCACGTAGTCAAGCGTCGCAGTACGGCCTACGGGAAGATCAAGTACCTCCTGGTGCGCGTGTCTGCAACACTTGCCGCTGCAAGGCCGTCCGAGGACGTTACACCGCCTGCCCGTTACCGGGCTGTCCGAATCTGAGCAGCTCTAAATCGAGAGTGAAACGGCTAAGAGCGTTACCTTCCAAGTGGCTTGACTTGTCACCGGAAATTCGGGAGCCAATCGCTCAAGAATTCCaaataccAAACAGCGCGACGAAATGTTGCTCGGCTTGCTTCAGCCGCATATCGCGCCGTTTAGCGCCGCATCTCGCCGGTGGTACCGAAGTATCCGAAGATGGCACCGATGCTTTATCGCGTCAGTGGACAGACGAGGAGCTCGAACAACTCCGCAGGGCACTTCGGGAACATGGCACCAATTGGCCGAAAGTCGCCGAACAGATACCCGGAAAAACGAATCATCAGtgcaaaaactattattttgcTTACCGAAAGAAATTGAGCCTCGATCAGGTAGTTGCCGAATACTACGCTTCATTGGGCGAGGAACGAAGACCGTGTCTGACtgacgaagaagaaagtggCAGTAGTACTAGCAGTTGCGATGAGCTGGCTGTTCATGATTCAAGTGATACAGCTAGTGCAGGAAGTCCGGCAACGACGGGCAGTAATGTAGCATCGAGTGGTACTGCGGCGACATCGTCATTATCAATGTCTTTCCGATCCAGCGAGCAAAAACTCGGCGAAAAACTCTCGGATATAGCCGTAGTATCACTTGTACCGCCTGGATCATCTCAACAGTCTTCCAGTAGTGGAGCTGTTACTGCTACTTCAGGTGGCAGGGAAGATTACGACAGTTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACTTGGATAATAGCAGTGTTGTAGTGACTCTAACAACCTCCAACAGTAATACAACATCGTTGCAACAACATCCGCAACCACCACCGATTGTTCATTCACCGCCTTCAACAACGAGTAATTCCAATCCACTCACTGTCAAGGATCTCATGCTTGGAGTCATCGAGATGCAATTAAAACGTACTCCCAACAGTCCAGCCGACGGTGGTGGCTCGTCAGCATCGAATAGTTCTGGCAATCCGACGATATCTAGTATTTTAAAGACAGATCATCGTAATGACATAACATATGTTCGTGGCTACAAATCGTCGTCAAATATAGCACATACTACGTTGTCTAATAGAGATACAAATCTAGCCACACTCTCCGTTGTCTCGGGACCTCATCATGCTCATCGTTCTGCTCCAAGTCCACAACCAATTGgTCAAATGCAAGCTACTATTACTCCTTGCCCACCAGCAGTACCGAGTAGTCAAGCTTCATCTTCGGACTTGCTACCTAAGGAAGGTTTGGTTGTCATGCAAGTGCAACAAGCGTTGCGAGAAACGGAAGGAACGTTGGATTTGAGTATCAAAAAACCAAGAGTACAACAAGATTACAATCATTCAATGCAGCTTCACAAGCCGCCGACGATTACGCTTTATCGGCCGGAACCGCCGGGTGCGTATTATCATCCTCACGCGCCTCATCCCGAACAAGGTCGTGGCGCGAAAAGTCCATTGATTTATGCTTCGTCACCGCGACCACAAGCACCCATTACACCTAAGATGAACAAAGTCACCGTACCACCGCCTCATCCCAAGCTATCTCCAAAATTAAGTACCATAGCCACGCCGGGTCACAAAGGTGGTTCCATCACGCATGGCACGCCTGTATCCACAGCGCGTTATGAAGGTTTGTTGCGGCAAATGACGCCGCCTGGTAANNNNNNNNgcggtggcggcggtggcggcggcgccGCCGCCATTAATGCCGGCTCCGCTGTACCAGGGACTCCAAAAGATACAGGTGGTTCAATTACACAAGGTACACCGGTACTTCCATTTGCGGTAGACAAACGCGGCACGCCTATATACGATTATCATCGTACCATTCGACATTCGCCTGTGACGGGCGGTGGCAATGTTTCACTCCCACCGCCGGGACAGGGTCCTACAAGTCAGGCGGCGTCGCCAGCCGTGGTAGTGAGTCATGGTGGCAATCAGTACAACTCTTATTCTACCGCCGGGCGGCCGCCGCCCAGTTATTCGATGGAGCAACAATTATCCAGCCGACAGATCATCATGAATGACTATATCACAAGTCAGCAGATGCATGCGCGTGCTCGTGGTAGCAGTAGCACTGGTTCATCTGTTGCTGCTGAGACGACCGGTAAGAGCGAACCACCACCGCCACCGTCGTCCACTCTCTATTATACTAGTACGCCTCCTCCATCACAAACACATACTCAACCGCGGCAAGGTGTTATCCAGAGGCACAATCCGCAGAAGCAAATGCACTATCCACCACCGCCACCTGGCCTGGAGGCGTTCTCCAGTTTAGTGGATGTGGCAGTACAACAACCCAGTCTTCCGGTGCCACATCCGCACGGTCATCCAGCTGCATCCGGTAGTGGTGGCCACGAGGGTCTCGGTAAAACGATGGCAGATCGCTTGTTAGCCGATCGTTATGACAATAACCGCGTGTTTCGCGAGCAAGAGATACGGCTGGAACATCGTATGGCAATGCAGGCTGCAGAACACAGACTAGCAGTGGCTGCAGCGGTGCAGCAGCATCATCATCGTGATCGAGATAGAGAACGCGACCTCGTTCATCTACGGGAAAAGGAGGAACATCGTTTGCATCGTGAAAAAGAGTTGCAACAACTAGAGCACCGTCTTGCAGTCCAGCAGCACCATCAACAACGTGAAAAGGATCTCCAGCAGCAAGAGCACCGTCTCGCTCAGCAGCGAGAGAAGGACATGCACGTCGAGCACGCTCGTTTGTCTGTGCAGCAAGCCCGGGAAAAGGATATACAACACGAACATCGACTTAGCGTACATCAACAGCGAGAAAAGGAGATACACCAAAAAATGGTGGCAGCTGCCGCACAACGCGAGATTGAGCATGAGCATCGACTTGCTGTACAACAACAACGCGAGAAGGAGATGCAACAGCAGGAGCGGCTTGCCATTCAGCAACACGAAAAAGATGTTGAACGTCGCCTGGCTATGCAGCATCGCGAAAGGGATCTGGCGCATCTTCATcaacaacagcaacagcagcaacagaTCCAGCAGCATATTCAGCAACAACGTATAGAAGCCGAGAGAAGACACATTGCGCAAATATACAGAGATCAACAACAAATCGATAGAGATTCGTCGAGATTAGCAAGCCTCGGATTTTCCTCGCAACCTTCCAGGCTTCAGCAATCTCAACAGTCtcaacaacagcagcagcagtcatcgacgtcgtcgtcgtcttcgcGACAGAGTCAATCTTCCAGTCAGCAAAATGACTCGTCGACTCTTACAGCCGCCAGTTTAATTGACGCTATCATCACCCATCAGATCAATCAGAGTGTTGAGAATCCCGGTGCAAGCGGATCGTCAGTCAATCAGCCAGCGCGTGCTGGCGATCGTCTTTTTCAGGGATTTCATCGCGAAAATCAAGAACCTAATGGCATAGCTCACAGTCCTGCTGGTGATGGCAGCGGCGGTGGAAATGGTGGAAGCGGTAACGGAAGTGGCGGCAATAAAGCAATCACTCTCGGCGAGCATGTTGATCATATTGTCTCTAAAGATTATGGCCCGCCTCATTCGTCGTATAGATCCTACGCTGGATATCAAATTTCCGAAGATCAATGGAAGAGACGAAAACTTGAACCGGACTCGGTGAAGACTGGGGATGAACGACAAATAATACGTGTTGCGCAACAGCAACATAcacagcagcaacagcagcatcAGTCATCGGGAAAGCAGCAATATCATTCGGTCGAGCCAGTTTCGCCGCCGGAGGCAACTACCAATCATTACGCACGTCGCTTGTACGATTCGAGCACTGCCACATCCACTTCCGGGACTCCCTCCAACAAGTCGCATTCGACGCCGTATGACGTGTCGCCATTCGATTATGTGAAAAACAAGATAGTTGAGGTGATGCGCACTGAGGACGACAAGGCtggtggtggcggcggcgacggtgGTGCGGGCTCCGACAGAAACGGAGGCGGTAATTCCGTCGTTGTGTCTGAGAAGGATGAAAAAGGAGTTGGTGCAGAGAGAAGCGTGGAGAGAAGCCCATCGggtggcggtggtggcggAAGTGGCGGTGGCGGTAATAGCGGAAGCAATGAGATGGTGGTCGACAATACGGGTGGACCGAATCCAACCACTCGTGAACAACCGCCGCCTCCTGCGCCCGCAGCTACTACCACGTTTTATCCATTTAGTGCGTTAGGGGTGCACACAGGACCACCGCCAGCCCCGCCACCCGCCTCAGCTACATCCGCCTCCGTAGCAAAATCAGAACAGATGCAAGCCGAGCCGGCGCCATTGCTTTCCTCGCAATACGAGCCGCTCTCGGATGAGGATTGA
Protein Sequence
MGAGSRGDRQRISLLPPVGSSVTSIPSPSAAAAASDYQQHTTTRNPPRVGLMPVQPDQYCSRTPVDMSSLQQDAPPFKKIRLGPHQQIQQLQSQPQPRCLSPADPCGGKQEQQQHVVQLQQPLRIDTREQPAVGAYTPQTEAISPTLPEPSTQEDAQYRSTKDDLLQQIGKVDREIAKRENQLNMLRKRLKELEETANKPLEVKDTEEQSQQPKHQSMAQKVYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTRHQTCMRARLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNYGVIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSTIGPIDILTTGVTTRLQREQQQKTQENPQNSSAATTSASATSTTGTSSVSSTTVGTTTVTTTTTSSSSIASGVNVTADSVTTSTTTTMTSVPNTTATSSISTTSTTSSTKDSREASKENKENKVDLKESHLIKVEPKEESQSESTSGKDIKVIMEGKGALSSSASSLNNATNVSTIQSDFKESSKKKPGCRDTNNSGANVAASGRIKDKKKENHTPMETSDEEAPSIDVIEGGKQIGPHACTVCQSVVEGSAHSRALPRSQASQYGLREDQVPPGARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPSKWLDLSPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLAGGTEVSEDGTDALSRQWTDEELEQLRRALREHGTNWPKVAEQIPGKTNHQCKNYYFAYRKKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPATTGSNVASSGTAATSSLSMSFRSSEQKLGEKLSDIAVVSLVPPGSSQQSSSSGAVTATSGGREDYDSSATETADEGQGGADLDNSSVVVTLTTSNSNTTSLQQHPQPPPIVHSPPSTTSNSNPLTVKDLMLGVIEMQLKRTPNSPADGGGSSASNSSGNPTISSILKTDHRNDITYVRGYKSSSNIAHTTLSNRDTNLATLSVVSGPHHAHRSAPSPQPIGQMQATITPCPPAVPSSQASSSDLLPKEGLVVMQVQQALRETEGTLDLSIKKPRVQQDYNHSMQLHKPPTITLYRPEPPGAYYHPHAPHPEQGRGAKSPLIYASSPRPQAPITPKMNKVTVPPPHPKLSPKLSTIATPGHKGGSITHGTPVSTARYEGLLRQMTPPGXXXXGGGGGGGAAAINAGSAVPGTPKDTGGSITQGTPVLPFAVDKRGTPIYDYHRTIRHSPVTGGGNVSLPPPGQGPTSQAASPAVVVSHGGNQYNSYSTAGRPPPSYSMEQQLSSRQIIMNDYITSQQMHARARGSSSTGSSVAAETTGKSEPPPPPSSTLYYTSTPPPSQTHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPAASGSGGHEGLGKTMADRLLADRYDNNRVFREQEIRLEHRMAMQAAEHRLAVAAAVQQHHHRDRDRERDLVHLREKEEHRLHREKELQQLEHRLAVQQHHQQREKDLQQQEHRLAQQREKDMHVEHARLSVQQAREKDIQHEHRLSVHQQREKEIHQKMVAAAAQREIEHEHRLAVQQQREKEMQQQERLAIQQHEKDVERRLAMQHRERDLAHLHQQQQQQQQIQQHIQQQRIEAERRHIAQIYRDQQQIDRDSSRLASLGFSSQPSRLQQSQQSQQQQQQSSTSSSSSRQSQSSSQQNDSSTLTAASLIDAIITHQINQSVENPGASGSSVNQPARAGDRLFQGFHRENQEPNGIAHSPAGDGSGGGNGGSGNGSGGNKAITLGEHVDHIVSKDYGPPHSSYRSYAGYQISEDQWKRRKLEPDSVKTGDERQIIRVAQQQHTQQQQQHQSSGKQQYHSVEPVSPPEATTNHYARRLYDSSTATSTSGTPSNKSHSTPYDVSPFDYVKNKIVEVMRTEDDKAGGGGGDGGAGSDRNGGGNSVVVSEKDEKGVGAERSVERSPSGGGGGGSGGGGNSGSNEMVVDNTGGPNPTTREQPPPPAPAATTTFYPFSALGVHTGPPPAPPPASATSASVAKSEQMQAEPAPLLSSQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2