Waur007032.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- bab2
- Assembly
- GCA_000956235.1
- Location
- NW:1998635-2031960[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.8e-12 5.2e-09 35.1 0.0 1 39 387 426 387 430 0.90 2 4 3.8e-13 4.2e-10 38.6 0.1 2 39 442 479 441 482 0.94 3 4 1.5e-18 1.6e-15 56.0 0.0 1 45 496 541 496 541 0.96 4 4 2.7e-18 3e-15 55.1 0.0 1 42 548 590 548 591 0.97
Sequence Information
- Coding Sequence
- ATGGAGACAGATCGTTATTGGGGCGTGCACTACAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACGTCGGTGTTCCACCAGCTCCTGCAGACCGAGGCCTTCGTCGACGTCACCCTGGCGTGCAACGAGGCCTCATTAAAGGCGCACAAGGTGGTGCTGTCGGCCTGCAGCTCCTACTTCCAGAAGCTCCTGCTGTCGAACCCGTGCAAACACCCGACGATCATCATGCCGCAGGACGTCTGCTTCAACGACCTCAAGTTCATCATCGAGTTCGTCTACCgcggcgagatcgacgtttcGCAAGCGGAGCTTCagTCGCTCTTGAAGACGGCCGACCAGCTAAAAATCAAGGGCCTGTGCGAGGTGCCGGAGAACAGGGACGGTCCGCAGCCCGTGAGTCTGAGCTCGCCGCCGAGGGAGTCCGGCACCCCGAGGTTGAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGAGACCCAGAATCGAGCGGCCCGCGTTCGAGCCGCGTCCTACCGATCCGAGACACTACGATCGTTACAAAGAGGAGGAGGCCAACGATTACAACCGTGATAACAAAGAGAACCATCGGGACTGGCAGGCTGAAGATGAAGAGTGCACGGagacagcagcagcagcagtagcaCTGGAAACTTGCcagcgtaataataataacaataacaacaaCAACGGTAACGGCACGAGTAACAACAGTGACATGTTCTGTCACACAGGGCTAGGGCACTATGGCCACCATCCGGATCCCGGAGAGGTCGATTTGCCCCCCGAGACCCAACCCACCCCACCCAGCGCCACCCTGGTCGGCACCACCATCACCCATCTGAGGGATCCGGATCATCATACAgAGATTCAGAATTGCGACAGCGTCAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCGGACACGATCGACATAGACAGCCACATGTCCGATCGGGCGAGCGTGAGCTCGAAGAACGCCGCCGACAGCGATAACATGATGATGATAACGCCGGAGCTGCTGGGGCTGATGCCGTCGGGAAGTTCCGGCCAGTCGGATTCGGGGGAGAACAACTCGAGGGGGCAGTCCAGCTCGCATCATCATGGTTCGAAGTCGTGGACGCAGGAGGACATGGACGCGGCTTTAGAGGCGCTGAGGCATCACAACATGAGCCTGACAAAAGCTTCtgCAACATTCGGTATTCCCTCGACGACTCTGTGGCAACGGGCGCACCGACTGGGCATCGACACACCGAAGAAGGACGGCCCCACGAAATCGTGGAGCGACGAGAGCTTGAACAACGCTTTAGAAGCGCTGCGCACCGGCTCCATTTCGGCTAACAAGGCGTCCAAGGCGTACGGTATACCTTCCAGTACGTTGTACAAGATCGCCAGGAGGGAAGGCATCAGACTGGCCGCGCCGTTCAACGCGAGTCCGACTACGTGGACGCCCAGCGATCTGGACCGCGCTCTAGAAGCAATAAGATCTGGTCAGACGTCCGTGCAAAGAGCGTCGACAGAATTCGGTATACCTACGGGGACTCTTTACGGAAGATGCAAACGGGAAGGAATCGAGCTTAGCAGGAGCAATCCTACGCCGTGGAGCGAAGACGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGCATAAATCAAGCCGCGATCCACTTCAATCTGCCGTATTCGTCACTGTACGGGCGCTTCAAGAGAGGCAAATACGAGGAGCCCGTCGTCGGCGACATCTCGCAGGACGGCACCAGTCCGCATTTCCATCAGAGCCCCAATCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTACCCGGGCAGTTGA
- Protein Sequence
- METDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPENRDGPQPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPAFEPRPTDPRHYDRYKEEEANDYNRDNKENHRDWQAEDEECTETAAAAVALETCQRNNNNNNNNNGNGTSNNSDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSGQSDSGENNSRGQSSSHHHGSKSWTQEDMDAALEALRHHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPSDLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHFNLPYSSLYGRFKRGKYEEPVVGDISQDGTSPHFHQSPNQNHSSALPDQMPYPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01520386;
- 80% Identity
- iTF_01523485;