Basic Information

Insect: Volucella zonaria
Gene Symbol: L
Assembly: GCA_963966105.1
Location: OZ014533.1:481177-501921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.4e-06 0.0015 20.8 1.7 1 23 212 234 212 234 0.98

2 15 0.35 1.2e+02 5.4 5.7 1 23 240 262 240 262 0.98

3 15 1.9e-07 6.6e-05 25.1 3.1 1 23 268 290 268 290 0.99

4 15 8.8e-06 0.003 19.9 0.3 1 23 296 318 296 318 0.98

5 15 0.4 1.4e+02 5.2 0.6 2 23 381 404 380 404 0.89

6 15 0.0021 0.72 12.4 0.7 2 23 421 443 420 443 0.96

7 15 0.016 5.6 9.6 1.4 1 23 524 546 524 546 0.97

8 15 2.5e-05 0.0087 18.4 1.8 2 23 554 575 553 575 0.96

9 15 0.00042 0.14 14.6 0.9 1 23 583 608 583 608 0.90

10 15 0.0011 0.39 13.2 2.9 1 23 700 722 700 723 0.96

11 15 0.2 70 6.1 7.0 2 23 906 928 905 928 0.94

12 15 0.097 33 7.1 0.1 1 23 934 956 934 956 0.92

13 15 7 2.4e+03 1.3 0.7 2 23 1074 1095 1074 1095 0.92

14 15 0.025 8.7 9.0 0.0 1 23 1105 1127 1105 1127 0.96

15 15 0.049 17 8.1 1.2 1 23 1134 1156 1134 1156 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.4e-06	0.0015	20.8	1.7	1	23	212	234	212	234	0.98
2	15	0.35	1.2e+02	5.4	5.7	1	23	240	262	240	262	0.98
3	15	1.9e-07	6.6e-05	25.1	3.1	1	23	268	290	268	290	0.99
4	15	8.8e-06	0.003	19.9	0.3	1	23	296	318	296	318	0.98
5	15	0.4	1.4e+02	5.2	0.6	2	23	381	404	380	404	0.89
6	15	0.0021	0.72	12.4	0.7	2	23	421	443	420	443	0.96
7	15	0.016	5.6	9.6	1.4	1	23	524	546	524	546	0.97
8	15	2.5e-05	0.0087	18.4	1.8	2	23	554	575	553	575	0.96
9	15	0.00042	0.14	14.6	0.9	1	23	583	608	583	608	0.90
10	15	0.0011	0.39	13.2	2.9	1	23	700	722	700	723	0.96
11	15	0.2	70	6.1	7.0	2	23	906	928	905	928	0.94
12	15	0.097	33	7.1	0.1	1	23	934	956	934	956	0.92
13	15	7	2.4e+03	1.3	0.7	2	23	1074	1095	1074	1095	0.92
14	15	0.025	8.7	9.0	0.0	1	23	1105	1127	1105	1127	0.96
15	15	0.049	17	8.1	1.2	1	23	1134	1156	1134	1156	0.93

Sequence Information

Coding Sequence: atGATGGCCTTAAAAATGCTTTATCGAGGCCCAAGCTCTAGGCTGGAAAATTTAATTGAGAAAATTCAAGCTACTAAAGAAGTGAACTCAGATCTTTACTCCACGCACACCTCGTCCAGCTATTCGCCCTCGATGTCGGATGGGACAATTACTCCGAACTCATTGCACAACCACCgccagcatcatcatcatcatcatcagaaaCTGCACCACATGCAGTATCAGTGTGAACAACAAAGCACCGGTGGTCGCAATCGCGACAGGCATCACAATCGACGTGTTTCAGCCATAAATGGAGCAACTGCCACCAGTGTTGGGCttggcggtggtggtggtggtggtgctgTTGGCGAGGACGATGAGAACGATGAGGATGATGGGGATGCCGAGGAAGATGATGACGCCGCGAATTCTAGCGAGGAAAGGGTTTTCCTTTCTTCGAATGGTGGTGGCAGTGCCAACGATGCCGCCACCACAACCACATCAACTATCAACAGTAGCATCGGTGGCGCAACCGGCGAACATTCCATGAAAattccaacgaaattgcggaaaatcGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGTTATCTGAAGAAGCATGAACAGAGTCATGCTGAGCACCTCCCGTTTAAATGTGAATATTGTGCAAGGTTATTCAAGCACAAAAGATCACGAGACCGACACACAAAACTTCATACTGGCGACAGACGATACAGGTGTCCACATTGTGAAGCTGCATTTTCGCGAAGTGATCATCTTAAGATTCACATGAAAACCCATgataaccaaaaaccatttcaatGTACCATCTGTAATCGTGGATACAATACGGCAGCAGCTCTGACATCTCACATGCAAAATCACAAGAAACAAGCAGCTTTACTTGCCGCTGGAGGAAATCCAGCTGCACTAAATTATAGTCCAAGATCAACTGGATCTGGTTCGAGTAACAGCAGCTTACAAAAACGCCGATATGCTGCAGTCTCAAACGCTAAAAGCCCAAGTCCCAATACAATAGATTATACAAAGCGATTGCGTAGCTCTTATATCTCTTGTATGTACTGTACGAAATCCGATTTTACATCTATGGAACAATTAAGCAATCACATTCAAACGATGCATGAAAAAGAAACTTTAGCCAACCAACCGGTTAGCAGTGGTTTTCCATTATCCTGTGAGTACTGCACAATGAAATTTCCCAACATCCCAACAATGTTCCAGCACATGAGAACCACTCATATTGATCGGTTATCCAGTCCTAGTAGTTACTTTGAACATTTCAATAGGCTAGCAGCTTCCGGTGCTTTCAGTCCACGATTGCCAACTCCAAAATCACAAGAAACAAAAGTTAAAGTCGAAGAGCTTAGTCCAAAGGACAATGAAAAACTTGACGAAGAACCAACCGATTTAAGTCAAAACAAGCGTTCAATTCAAACACCATCACATGAGTCAACAGAAGTCACAGAAAAACCAGGAGTCTTTTTTTGCAATCAATGCAATGACGGTTTTCCAGATTTTGATAGCTTCCGCAACCATCTAAAGTCACACATAGTTCAGGGATTGAACTTGGTTTGTCATCATTGTGGACAGACACTGCGCGATCAGTCTGAATATGAGAGACATATTATATCTCATTTCCTCATAACGACATCCGAGTACAATTGCACGGAGAAGAATTGCAACAAAACGTTTCCAAAGCCCGAAGAGCTGCAAAAGCATCTTTTTGACAACCACATACAAACGTTGTATAAATGCCTGCTGTGCGCAGATCTTTTTGAAACGAAAGTAGCAGTTCAAGTACACTTTGCTTGTATACATTCACCAGAGAATAAAATTTTCCGCTGTTCAGCTTGCATGGATACGTTCCATGGTGAACAGGAGTTTCATATTCATGTCAAGACACGACATCAGACAATAGTCGGTTCACCTATTCAGTGTATGTTTTGCAGGGCGGTTTGTTCTACAGAATTGGAGATGCATTTTCATCTTGCTGCTCATGCTCGACAATTTCGCTGTCCATCATGTCCAGAGACTTTTCATGTGGAATTTTTACTAGACAGACATATGCAAACCCATCACGAACAGAAGGAAGTTGAAACGACATCTGCTGTCAACCCATCGGCCACCTCAATCAATCCACTTTATATGAGCGCTCTGTTTAATAAGCCACTTCCATCGACTCAAAATAACAATAACAGTAACTTTGACTACAATGCATTTGCACTGGGAAAGAATCTTTTCGGCAATGCCTCAGGAAATAAACTCTATAATCCACTGCAAGTAGATACCAGTTCCTCAATAAAACATCCTCTAGTATACGCCAGCTTGAATCAGCGTTACTTTGATACAAATCGAACTATTCTTGAAATGtacaaccaacaccaacaagagAAACTTAGTAATGCCTCAACAACTTACTTTAATAGtcctaacaacaacaacaacaataacagcaacagTAACCGAAGTGCAACTAAGCCTCAACCAGAACAGAACAAGACAACAGATCGAGGATTGGGCAGCGGCTTTAGTTGTGGCATGTGTGAACGCAATGATTTCCGAACTGAAGCGGAAATCCACTCACATCGTAAAATCGTTCATAATCTTAAGACTGGTGTAAGTCTCCGTTGTGCTTACTGTTGCGGTAATTTCAAGTCTAGAAGTGAGCTTGAACATCATATGAAAACATGCCACAACTCAACTGGAAAGCACAAATGTCTCATTTGTGATGAGATATTTCCATCGCCGGCTATCCTTGCTGAACATAAACTACAACATTCTAAAGTGGGACAATCGGGAAAGTGTTCACATTGCTCGCAAGGATTATTAGATGTTACAGCTTTTAAGAGTCATCTCTTAGAGCATAACACTGAAGGACAGATGCCAgttcaatgcatttgctgtcgCCAAACACTTCATTCGGATTTCGAAATTGGTTTACATGCCAAATTTCACGTTAAATCCTCATCCGTGTCAGAAAGTGTATGCGCGCTTTGCTTGGAAACAATTCCAAATACAACGGATGCCAAAGTGTGCGAGAAATGTTGTCGCAAGCATAATTTAAGCGCTAAATTCAACAGTCAACGGAATTTTGAAACAAACTCTGCTACCTCAAACTACGTAGAGAATCGTTGCAACCTTTGCAAAGTGATTATGCCACATTCACAAAAACTGCAGGAACACTTGGTCGAGCATACTTTTGCTGGCTGCGAGGATAGGGGCTTCACATGTTACATCTGTTCGGCGGTTTTTACTGCACCAGCAGGTCTTCTAGGACACATGACTGAGCATGGAGCTAATTCTCGGCCGTACGATTGTAATCTTTGCAGTGAAAAATTTTACTTCCGTGCTGAACTGGATCATCATTTGGTAGACCATGACATAAGAGATCGATTAAAGAATATTGCTACAGTGGAGCCCATTTTACCAACAGACGTGAAGAAAAATCCCGAGGAAACTCCCCAAGAGAGTGTCACTTCTATGCTAGAACTTAAGAATGAAGGTCCTACTGAAAGGACAgctgacgatgacgatgatgagtACATTGAGGTAGAAACGATCCCAGAAGTCCCACGAGAGAACACCGAAAAAGAAGATTAG
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEVNSDLYSTHTSSSYSPSMSDGTITPNSLHNHRQHHHHHHQKLHHMQYQCEQQSTGGRNRDRHHNRRVSAINGATATSVGLGGGGGGGAVGEDDENDEDDGDAEEDDDAANSSEERVFLSSNGGGSANDAATTTTSTINSSIGGATGEHSMKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPAALNYSPRSTGSGSSNSSLQKRRYAAVSNAKSPSPNTIDYTKRLRSSYISCMYCTKSDFTSMEQLSNHIQTMHEKETLANQPVSSGFPLSCEYCTMKFPNIPTMFQHMRTTHIDRLSSPSSYFEHFNRLAASGAFSPRLPTPKSQETKVKVEELSPKDNEKLDEEPTDLSQNKRSIQTPSHESTEVTEKPGVFFCNQCNDGFPDFDSFRNHLKSHIVQGLNLVCHHCGQTLRDQSEYERHIISHFLITTSEYNCTEKNCNKTFPKPEELQKHLFDNHIQTLYKCLLCADLFETKVAVQVHFACIHSPENKIFRCSACMDTFHGEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHEQKEVETTSAVNPSATSINPLYMSALFNKPLPSTQNNNNSNFDYNAFALGKNLFGNASGNKLYNPLQVDTSSSIKHPLVYASLNQRYFDTNRTILEMYNQHQQEKLSNASTTYFNSPNNNNNNNSNSNRSATKPQPEQNKTTDRGLGSGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCCGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSQGLLDVTAFKSHLLEHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHVKSSSVSESVCALCLETIPNTTDAKVCEKCCRKHNLSAKFNSQRNFETNSATSNYVENRCNLCKVIMPHSQKLQEHLVEHTFAGCEDRGFTCYICSAVFTAPAGLLGHMTEHGANSRPYDCNLCSEKFYFRAELDHHLVDHDIRDRLKNIATVEPILPTDVKKNPEETPQESVTSMLELKNEGPTERTADDDDDEYIEVETIPEVPRENTEKED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_01522157;
80% Identity: -