Basic Information

Insect: Volucella inanis
Gene Symbol: L
Assembly: GCA_907269105.1
Location: OU026157.1:140658040-140663866[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.3e-06 0.00073 20.9 1.7 1 23 162 184 162 184 0.98

2 15 0.34 58 5.5 5.7 1 23 190 212 190 212 0.98

3 15 1.9e-07 3.1e-05 25.2 3.1 1 23 218 240 218 240 0.99

4 15 8.6e-06 0.0015 19.9 0.3 1 23 246 268 246 268 0.98

5 15 0.39 65 5.3 0.6 2 23 331 354 330 354 0.89

6 15 0.002 0.34 12.5 0.7 2 23 371 393 370 393 0.96

7 15 0.016 2.7 9.7 1.4 1 23 474 496 474 496 0.97

8 15 7.8e-05 0.013 16.9 1.8 2 23 504 525 503 525 0.96

9 15 0.00041 0.068 14.7 0.9 1 23 533 558 533 558 0.90

10 15 0.0011 0.19 13.3 2.9 1 23 650 672 650 673 0.96

11 15 0.2 33 6.2 7.0 2 23 855 877 854 877 0.94

12 15 0.095 16 7.2 0.1 1 23 883 905 883 905 0.92

13 15 6.9 1.2e+03 1.4 0.7 2 23 1023 1044 1023 1044 0.92

14 15 0.0088 1.5 10.5 0.0 1 23 1054 1076 1054 1076 0.97

15 15 0.048 8.1 8.1 1.2 1 23 1083 1105 1083 1105 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.3e-06	0.00073	20.9	1.7	1	23	162	184	162	184	0.98
2	15	0.34	58	5.5	5.7	1	23	190	212	190	212	0.98
3	15	1.9e-07	3.1e-05	25.2	3.1	1	23	218	240	218	240	0.99
4	15	8.6e-06	0.0015	19.9	0.3	1	23	246	268	246	268	0.98
5	15	0.39	65	5.3	0.6	2	23	331	354	330	354	0.89
6	15	0.002	0.34	12.5	0.7	2	23	371	393	370	393	0.96
7	15	0.016	2.7	9.7	1.4	1	23	474	496	474	496	0.97
8	15	7.8e-05	0.013	16.9	1.8	2	23	504	525	503	525	0.96
9	15	0.00041	0.068	14.7	0.9	1	23	533	558	533	558	0.90
10	15	0.0011	0.19	13.3	2.9	1	23	650	672	650	673	0.96
11	15	0.2	33	6.2	7.0	2	23	855	877	854	877	0.94
12	15	0.095	16	7.2	0.1	1	23	883	905	883	905	0.92
13	15	6.9	1.2e+03	1.4	0.7	2	23	1023	1044	1023	1044	0.92
14	15	0.0088	1.5	10.5	0.0	1	23	1054	1076	1054	1076	0.97
15	15	0.048	8.1	8.1	1.2	1	23	1083	1105	1083	1105	0.93

Sequence Information

Coding Sequence: ATGTCGGATGGGACAATTACTCCGAACTCATTGCACAACCACCGCcagcatcatcatcaacagAAACTGCACCACATGCAGTACCAGTGTGAACAACAGAGCACCGGTGGTCGCAATCACGACAGGCATCACAATCGACGTGTTTCAGCCATAAATGGAGCAACTGCCACCAGTGTTGGGCttggtggtggtgttgttgGCGAGGATGATGAGAATGATGAGGATGATGGGGATGCCGAGGAAGATGATGACGCCGCAAATTCTAGCGAGGAAAGGGTTTTCCTTTCTTCGAATGGTGGTGGCAGTGCTAACGATGCCGCCACCACAACCACATCAACTATCAACAGCAGCATCGGTGGCGCAACCGGCGAACATTCCATGAAAattccaacgaaattgcggaaaatCGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGTTATCTGAAGAAGCATGAACAGAGTCATGCTGAGCACCTCCCGTTTAAATGTGAATATTGTGCAAGGTTATTCAAGCACAAAAGGTCACGGGACCGACACACTAAACTTCATACTGGCGACAGGCGATACAGGTGTCCACATTGTGAAGCTGCATTTTCGCGAAGTGATCATCTTAAGATTCATATGAAAACCCATGATAACCAAAAACCATTTCAATGTACCATCTGTAATCGTGGATACAATACGGCGGCAGCTTTGACATCTCACATGCAAAATCACAAGAAACAAGCAGCTTTACTTGCCGCTGGAGGAAATCCAGCTGCACTAAATTATAGTCCAAGATCAACTGGATCTGGTTCAAGTAACAGCAGCTTACAAAAACGCCGATATGCTGCAGTATCTAACGCTAAAAGCCCAAGTCCTAATACAATAGATTATACAAAGCGATTGCGTAGTTCTTATATCTCTTGTATGTACTGTACCAAATCCGATTTTACATCTATGGAACAATTAAGCAATCACATTCAAACGATGCATGAAAAAGAAACTTTATCTAACCAACCTGTTAACAGTGGCTTTCCATTATCCTGTGAATACTGCACAATGAAATTTCCCAACATCCCAACAATGTTCCAACACATGAGAACCACTCATATTGATCGGTTATCCAGTCCTAGTAGTTACTTTGAACATTTTAACAGGCTAGCAGCCTCTGGAGCTTTCAGTCCACGATTGCCAACTCCAAAATCACAAGAAacaaaagttaaagtcgaagaGCTTAGTccaaaagagaatgaaaaacttgATGAAGAACCAACCGATTTAAGTCAAAACAAGCGTTCGGTTCAAACAACGTCACATGAGTCAGCAGAAGTCACAGAGAAGCCAGGAGTCTTTTTCTGCAATCAATGCAATGATGGCTTTCCAGATTTTGATAGCTTCCGCAACCATCTAAAGTCACACATAGTTCAGGGATTGAATTTGGTTTGTCATCATTGCGGACAGACACTACGCGATCAGTCTGAATATGAGAGGCATGTTATATCCCATTTCCTCATAACGACATCAGAGTACAATTGCACGGAGAAGAATTGCAACAAAACTTTTCCAAAGCCCGAAGAACTCCAAAAGCATCTTTTTGACAATCATATACAAACGTTGTATAAATGCTTACTGTGCGCAGATATTTTTGAAACGAAAGTGGCAATTCAAGTTCACTTTGCTTGTATCCAttcaccagagaacaaaattttCCGTTGTTCAGCTTGCATGGATACGTTCCATGCTGAACAGGAGTTTCACATTCACGTCAAGACACGACATCAGACAATAGTCGGTTCACCTATTCAGTGTATGTTTTGCAGGGCAGTTTGCTCTACAGAATTGGAGATGCATTTTCATCTTGCTGCTCATGCTCGACAATTTCGCTGTCCATCATGTCCAGAAACTTTTCATGTGGAATTTTTGCTTGACAGACATATGCAAACCCATCACGAACAGAAGGAAGTTGAAACAACATCTGCAGTCAACCCATCGACTACCTCTCTCAATCCACTTTATATGAGCGCGCTTTTTAATAAGCCGCTTCCATCGACTCTaaataacaataacagtaaCTTTGACTACAATGCATTTGCACTAGGAAAGAATCTTTTCGGTAATGCCTCAGGAAATAAACTCTATAATCCACTGCAAGTAGATACCAGTTCCTCAATAAAACACCCTTTAGTATACGCCAGCTTGAATCAGCGTTACTTCGACACAAATAGAACTATTCTTGAAATGTACAGCCAACACCAACAAGAGAAACTTAGTAATGCCTCAACAACTTACTTTAGTAGTcctaacaacaataataataacaacaacagtaaCCGAAGTGCAACTAAGTCCCAACCAGAACCGAACAAGCCAACAGATCGAGGATTGGCTAGCGGCTTTAGTTGCGGTATGTGTGAACGCAATGATTTCCGAACTGAAGCGGAGATCCACTCACATCGTAAAATCGTTCATAACCTTAAGACTGGTGTAAGTCTCCGTTGTGCTTACTGTTGTGGTAATTTCAAGTCTAGAAGTGAGCTTGAACACCATATGAAAACATGCCACAGCTCCACTGGAAAGCACAAATGCCTCATTTGTGATGAGATATTTCCATCCCCGGCTATCCTTGCTGAGCATAAACTACAACATTCCAAAGTGGGACAATCGGGAAAGTGTTCGCATTGCTCTCAAGGATTATTAGATGTTACAGCTTTTAAGAACCATCTCTTAGAGCATAATACTGAAGGACAGATGCCAGTTCAATGCATTTGCTGCCGTCAAACACTTCACTCGGATTTCGAAATTGGTTTACATGCCAAATTCCACGTAAAATCCTCTTCCGTCTCGGAAAGTGTATGCGCGCTTTGCTTGGAAACAATTCCAAATACGACGGATGCCAAAGTGTGCGAGAAATGCTGTCGCAAGCATAATTTGAGCGCTAAATTTAACAGTCAACGGAATTTTGAATCAAGCTCTGCTACATCAAACTACGTAGAGAATCGTTGCAATCTTTGCAAAGTGATTATGCCACATTCACAAAAGCTCCAGGAACACTTGGTTGAGCATACTTTTGCTGGTTGTGAGGATAGGGGCTTCACATGTTACATCTGTTCCGCCGTTTTTACTGTACCAGCAGGTCTTTTGGGACACATGACTGAGCATGGAGCCAATTCCCGACCGTACGATTGCAATCTTTGCAGTGAAAAATTTTACTTCCGTGCTGAGCTGGATCATCATTTGGTAGATCATGATATACGAGATCGATTAAAGAATGTTGCTACGGTGGAGCCCATATTAACAGCAGACGTGAAGAAAAATGCGGAGGAAACTCCCCCAGAAAGCGTACCTTCTATATTAGAGCTTAAGAATGAAGGTCCTGCTGAAAGGACAgctgacgatgacgatgatgagtACATAGAGGTAGAAACGATCCCTGAAGTCCCACGAGAGAACACCGAAAAAGAAGATTAG
Protein Sequence: MSDGTITPNSLHNHRQHHHQQKLHHMQYQCEQQSTGGRNHDRHHNRRVSAINGATATSVGLGGGVVGEDDENDEDDGDAEEDDDAANSSEERVFLSSNGGGSANDAATTTTSTINSSIGGATGEHSMKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPAALNYSPRSTGSGSSNSSLQKRRYAAVSNAKSPSPNTIDYTKRLRSSYISCMYCTKSDFTSMEQLSNHIQTMHEKETLSNQPVNSGFPLSCEYCTMKFPNIPTMFQHMRTTHIDRLSSPSSYFEHFNRLAASGAFSPRLPTPKSQETKVKVEELSPKENEKLDEEPTDLSQNKRSVQTTSHESAEVTEKPGVFFCNQCNDGFPDFDSFRNHLKSHIVQGLNLVCHHCGQTLRDQSEYERHVISHFLITTSEYNCTEKNCNKTFPKPEELQKHLFDNHIQTLYKCLLCADIFETKVAIQVHFACIHSPENKIFRCSACMDTFHAEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHEQKEVETTSAVNPSTTSLNPLYMSALFNKPLPSTLNNNNSNFDYNAFALGKNLFGNASGNKLYNPLQVDTSSSIKHPLVYASLNQRYFDTNRTILEMYSQHQQEKLSNASTTYFSSPNNNNNNNNSNRSATKSQPEPNKPTDRGLASGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCCGNFKSRSELEHHMKTCHSSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSQGLLDVTAFKNHLLEHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHVKSSSVSESVCALCLETIPNTTDAKVCEKCCRKHNLSAKFNSQRNFESSSATSNYVENRCNLCKVIMPHSQKLQEHLVEHTFAGCEDRGFTCYICSAVFTVPAGLLGHMTEHGANSRPYDCNLCSEKFYFRAELDHHLVDHDIRDRLKNVATVEPILTADVKKNAEETPPESVPSILELKNEGPAERTADDDDDEYIEVETIPEVPRENTEKED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_01521474; iTF_01522976;
80% Identity: -