Basic Information

Insect: Volucella zonaria
Gene Symbol: -
Assembly: GCA_963966105.1
Location: OZ014531.1:203138268-203140606[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.2 2.5e+03 1.3 0.1 2 12 16 26 15 31 0.76

2 14 0.73 2.5e+02 4.4 1.4 1 23 188 213 188 213 0.89

3 14 7.8e-05 0.027 16.9 2.3 1 23 219 241 219 241 0.98

4 14 6.8 2.3e+03 1.3 0.1 2 9 247 254 246 269 0.87

5 14 1.2 4.2e+02 3.7 0.3 2 11 276 285 276 291 0.81

6 14 0.00023 0.079 15.4 5.0 1 23 305 327 305 327 0.98

7 14 1.9e-05 0.0067 18.8 2.1 1 23 333 355 333 355 0.96

8 14 0.00019 0.064 15.7 7.6 1 23 360 382 360 382 0.99

9 14 0.018 6.1 9.5 2.6 2 23 390 412 390 412 0.92

10 14 0.00043 0.15 14.5 0.8 1 23 437 459 437 459 0.99

11 14 2.2e-05 0.0075 18.6 3.7 1 23 465 488 465 488 0.97

12 14 4.9e-07 0.00017 23.8 0.7 1 23 494 517 494 517 0.96

13 14 1.5e-05 0.005 19.2 0.9 1 23 523 545 523 545 0.98

14 14 0.00027 0.092 15.2 2.5 1 23 551 573 551 573 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.2	2.5e+03	1.3	0.1	2	12	16	26	15	31	0.76
2	14	0.73	2.5e+02	4.4	1.4	1	23	188	213	188	213	0.89
3	14	7.8e-05	0.027	16.9	2.3	1	23	219	241	219	241	0.98
4	14	6.8	2.3e+03	1.3	0.1	2	9	247	254	246	269	0.87
5	14	1.2	4.2e+02	3.7	0.3	2	11	276	285	276	291	0.81
6	14	0.00023	0.079	15.4	5.0	1	23	305	327	305	327	0.98
7	14	1.9e-05	0.0067	18.8	2.1	1	23	333	355	333	355	0.96
8	14	0.00019	0.064	15.7	7.6	1	23	360	382	360	382	0.99
9	14	0.018	6.1	9.5	2.6	2	23	390	412	390	412	0.92
10	14	0.00043	0.15	14.5	0.8	1	23	437	459	437	459	0.99
11	14	2.2e-05	0.0075	18.6	3.7	1	23	465	488	465	488	0.97
12	14	4.9e-07	0.00017	23.8	0.7	1	23	494	517	494	517	0.96
13	14	1.5e-05	0.005	19.2	0.9	1	23	523	545	523	545	0.98
14	14	0.00027	0.092	15.2	2.5	1	23	551	573	551	573	0.99

Sequence Information

Coding Sequence: ATGGATCCGGTGGTACCAACTCAAAAACCAAGTGCGGTGGAAAGCACTTGCAGGACGTGTGGAAAGATATCTGAAGATGGTTCGGACCTCTATCCCATGTACACCTCAACTGAGTACCACAATGAACTAAAGATGGTCCAAGAAGAATTCGACATATGGAATCTAAATATCGCTGAAGATGACGGACTGCcccaaaaaatttgtttaacctGCTTTGACAGCTTTTGTCAAATTCACAATTtccgaataatatgccaagaagCACAGATGAACTTTGGGGAATTATGCACCGGCCTCGACATCATAATAAAGCTTAATGATGAAAATATCAATTTAGATGAAGACTTTCCAGAAGATTTTGAGGGCGATCAATTAATTACAATTCAGGAGCATTATCAGTTCCCAGGTGATGAACAAGAAGCTGCTCCAGATCCAGCTGAGGATGAGTCGATATATGATCATCTCTTAGACACCCTGGCCTCAGATGAAGAAACACAGAAATACGGAAATACAATGCAATCAAATGAGGAAATGGAGGCTGTTATTTCAGAGTTTAAACCTTTCCAATGTGAGTATTGCATGGACGTCGTGAGTTTTGACGATACCGAGTTGCTCAATAAGCATTACAACGTTTTCCATTCTTCGGAGGATCCCTATCCATGCCCCAAGTGCGATAAGCACTTCAATACTAAAGTAAAACGAAATAGCCATGCGAGAGTGCACTTTCGCAATACGATTTCTTGTCCAgtttgtaaaaagaaaattcgaggCGGCAAGAGAATGTTGGCTCAACACTTTGAATTGCACCACAATGAGAAGAAGCGTGAGTGCCTAACCTGTGGTAAGAAGTTTGAGAAAATTACGTTGAAGAGATTTAACTATCATTTGAGTTGGCATGATGATTCCAAACTTCATAAATGCAAGTTTTGTGATAAGAAGTTCATCCAGGTGACGCATTTGGCAGTGCATGAGAAAACACACACCGGAGAGTGCCCATACTTATGCAGTCAGTGTGGACTTGGATTTAAAAGCTCCAGTCTTTTGCACTCGCATTTAAAGACCCATGGAGCACTAGAATATGAGTGCCCGCATTGTACCAGAAAATTCTTCCATCGACATGGATTAAAACTCCACATTCAGACACACGATCGGGGTAAAAAAGCTCCATATTGTGAAATTTGTAAGAGGTCTTTTGGGTCTATGATGAATCTTCGTTTGCACAACCACAGACGGCATGGTGGACCATCATCACCGGCAAttattaacattttaaaaaaacgcgttaagaaacaaattttcataaagCCATACAAATGCGCACAGTGTCCAGAGGCATTTGTGCTGCACCTACAGCTACTTAAACACTTAAAAACGCATGAAGAGAACCGACCACATAAGTGCGACCGTTGTGGTAGATCATACAAACGAGAAGCTCATTTAAAATTGCATTTGAACTCTGTTCACTTAAATAACAAACCACATAAGTGCACCATTTGTGGATGGGCATTTTCACAAAAGAACAATTTGATGGAACACATCGCTTCGAAACATCAAGATAAAAGAGACTTTGTGTGTGATATTTGTGGGAAGGCTTTTGCCATTGCAAAGACTCTTAGACATCATAAACAAAAGCATTCGGACAAGAAACCGTACACGTGTAATATATGCCATAAACGGTTCACGATGATGGGAATACTAAAGTCACACATCAACACTCACCTGAAAAAGAAGGAGGCCGATGTCGCTGCAGGAGATATTACAGATGTTCTATTGTAA
Protein Sequence: MDPVVPTQKPSAVESTCRTCGKISEDGSDLYPMYTSTEYHNELKMVQEEFDIWNLNIAEDDGLPQKICLTCFDSFCQIHNFRIICQEAQMNFGELCTGLDIIIKLNDENINLDEDFPEDFEGDQLITIQEHYQFPGDEQEAAPDPAEDESIYDHLLDTLASDEETQKYGNTMQSNEEMEAVISEFKPFQCEYCMDVVSFDDTELLNKHYNVFHSSEDPYPCPKCDKHFNTKVKRNSHARVHFRNTISCPVCKKKIRGGKRMLAQHFELHHNEKKRECLTCGKKFEKITLKRFNYHLSWHDDSKLHKCKFCDKKFIQVTHLAVHEKTHTGECPYLCSQCGLGFKSSSLLHSHLKTHGALEYECPHCTRKFFHRHGLKLHIQTHDRGKKAPYCEICKRSFGSMMNLRLHNHRRHGGPSSPAIINILKKRVKKQIFIKPYKCAQCPEAFVLHLQLLKHLKTHEENRPHKCDRCGRSYKREAHLKLHLNSVHLNNKPHKCTICGWAFSQKNNLMEHIASKHQDKRDFVCDICGKAFAIAKTLRHHKQKHSDKKPYTCNICHKRFTMMGILKSHINTHLKKKEADVAAGDITDVLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01521350;
90% Identity: iTF_01521350;
80% Identity: -