Basic Information

Insect: Volucella zonaria
Gene Symbol: su(Hw)
Assembly: GCA_963966105.1
Location: OZ014530.1:271120172-271137458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00082 0.28 13.7 1.0 1 20 131 150 131 151 0.95

2 13 7e-06 0.0024 20.2 0.5 3 23 203 224 201 224 0.92

3 13 0.57 2e+02 4.7 0.1 1 23 230 252 230 252 0.94

4 13 2.7e-05 0.0093 18.3 3.6 1 21 259 279 259 280 0.94

5 13 2.7e-05 0.0092 18.3 1.4 2 23 292 313 291 313 0.97

6 13 0.00035 0.12 14.8 6.4 1 23 324 346 324 346 0.99

7 13 0.0016 0.54 12.8 2.1 1 21 352 372 352 374 0.94

8 13 1.1e-05 0.0038 19.6 2.2 1 23 380 402 380 402 0.99

9 13 1e-07 3.5e-05 26.0 1.5 1 23 408 430 408 430 0.98

10 13 0.00016 0.055 15.9 3.4 1 23 434 456 434 456 0.99

11 13 9.5e-05 0.033 16.6 0.5 1 23 468 492 468 492 0.91

12 13 0.86 3e+02 4.2 2.4 3 23 500 521 499 521 0.95

13 13 0.0049 1.7 11.2 3.9 2 23 527 549 526 549 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00082	0.28	13.7	1.0	1	20	131	150	131	151	0.95
2	13	7e-06	0.0024	20.2	0.5	3	23	203	224	201	224	0.92
3	13	0.57	2e+02	4.7	0.1	1	23	230	252	230	252	0.94
4	13	2.7e-05	0.0093	18.3	3.6	1	21	259	279	259	280	0.94
5	13	2.7e-05	0.0092	18.3	1.4	2	23	292	313	291	313	0.97
6	13	0.00035	0.12	14.8	6.4	1	23	324	346	324	346	0.99
7	13	0.0016	0.54	12.8	2.1	1	21	352	372	352	374	0.94
8	13	1.1e-05	0.0038	19.6	2.2	1	23	380	402	380	402	0.99
9	13	1e-07	3.5e-05	26.0	1.5	1	23	408	430	408	430	0.98
10	13	0.00016	0.055	15.9	3.4	1	23	434	456	434	456	0.99
11	13	9.5e-05	0.033	16.6	0.5	1	23	468	492	468	492	0.91
12	13	0.86	3e+02	4.2	2.4	3	23	500	521	499	521	0.95
13	13	0.0049	1.7	11.2	3.9	2	23	527	549	526	549	0.97

Sequence Information

Coding Sequence: ATGTATTCCGAGAATTGCAGCACTTACTATAGAGGTAATAGGTCTTCCGCAACAAAGAGATCCTTAACTTCAAAAACTTCAAATAACGGTTCAGTTATTCTTAACGTCAAAAAGGGACGAATAACAAGAAGTTCAAAACGTACCATTCTCGATTCGGaaattaagaaagaagaaaCCGATCCATCCGCGCCAACCGATCACTACTTATTAAAGGAAATTAAAGGcgacgatgaagacgatattGCATTTGTCCTTACAGAAAACTCATTTCATAATGAGAGTAGTCCACCACCTGAATGTgttgaagaaattcaaattgaagaaaactttAACGGGGAAGGCGATGCTGATGAGCATGACGACAATATTAACACAAAGGAAATTGTCGAGCATGTTTGTGGAAAATGTTATAAATCATTTCGCTCGATTAAaGGATTGAAGCGCCACTTGGATTTTTGCAACTTCAACAGCGACGTTGTGTTGCGAAGGGCCGAAATGTTGAAGAATatagaaaaaatcgaaaaggagGCTGTTATCATGGAGAAAAAAGACGTCTGTTTTTGCTGCGGCGATAGTTATGATACATGTCATTTAGGTCACATTAATTGCAGCGAGTGtccgaaaacatttaaaacacaacTCAGCCTTGAACGTCATATGTTCCTTATTCACTctgaaaaaaatgattttccaTGTGAAATTTGTAATGGGCTCATTCGGACCAAATCTTTACTAGATTTGCATACAGAACAGCACAAAAACCGCGGCAAACCGTTTGCTTGTAAAGAGTGTGGAAAAGATTTTACACGGATGTATCACTTGAAAAGACATCATAACTTTTCGTCATGTGGTAAGCAACAAGTTGAGACGATGCAATGTCAAGTGTGTCAGAAGGAGTTCTTTCGCTTGGATAATCTACGTATGCATTTGAAATCGCACTTGGGTCATGGAACACCTAAGAAACCGGAGTATACGTGCCCCTGTTGcaagaaatgctttttcagtTTATCAACACTCAAtattcATATTCGAACTCATACTGGTGAGAGACCTTTTGATTGTGACCTTTGTGACAAGAGTTTCCCAGCTttagtttctttaaaaaagcATAGGAGATGTCATACCGGTGAAAAGCCATATACTTGTTCAGAGtgtAATCAACACTTTGCTGTCAAGGAAGTACTTAACAGGCATATGCGACGCCATACAGGTGTAAAACCGCATGTTTGCGATGAATGTGGCAAGCGTTTTATTCAAGCCACTCAGTTGAAAAATCATTTACGTACGCATTTGCGACCTTATGAATGCTCCATATGTGATGAGAAATTCAAAACTGAAAAGCAATGTGAAAAACACATAAAAACGCATTCGAAACAATCTAGGAGCAAGACCGCAGGGAAATACAATTGCACTGACTGTGGGGTAAGCTTTAATGGTAGAACTGCTCTACAAAAACACGAACAAACTTCTAAGCATATTGcaAATGCAAAAAAGAACTGTCCCGAGTGTGGGGAGCTTTGTGCAAATACTAAATCTCTACATTTTCATATGCTAAAAGAGCATGGAGCTACTGACATCAAGTGCAATAAATGTGATATGGAATTTTGGCAATTCCATTTGTTGCAGCATCACATGAAAACTGTGCACAACGAaaccaaTGCTGATAAAAGAAAAAGCCGGTCTGAAGAAGAACCAGTTAAGAAGGAGAACGATTGTATAATTATTGAGGAGATCATTGTGGATTCTTTATCAAGTGAGGCAGTTATTCAAGCAAGCGCAGCACATGAATTTACCATAATTGCAAACAGTAATGGAGTTGTTCCCGAAATAAAGAAACCTCATACAATCAAACCATGTTCACCTAATCTGAGAGCTGAACTTAAAAAATCACTGGCAGATTGTTTACGAAAAGAGTCTCCTAAAAAGGTTACGAATGAAAACGCTATGGGCAATGAGGACAAGCAAATAACAGAGAATGTTGGGAAATTACTTGATATGTTGGTGGATGTGGAGACGCTTGTTAAATTTGGGTGGCCCGATGAATCTGTAGAAAATgttcTTTGTAAGGTAATTGAGAACTGTGGACATAAACTGCATAAAAGAGATTTTACTGAAGAGTATGGGACGAGGATGAGGGAATTTGTTAAACTTTTATTTACTGTAGTTATTCAAAATGATTCCATTAAAGAACTTCTAAACAATTACCCAATCGATGAGGTCATTGAATTTGCTCTTttaaatgatgatgatgattag
Protein Sequence: MYSENCSTYYRGNRSSATKRSLTSKTSNNGSVILNVKKGRITRSSKRTILDSEIKKEETDPSAPTDHYLLKEIKGDDEDDIAFVLTENSFHNESSPPPECVEEIQIEENFNGEGDADEHDDNINTKEIVEHVCGKCYKSFRSIKGLKRHLDFCNFNSDVVLRRAEMLKNIEKIEKEAVIMEKKDVCFCCGDSYDTCHLGHINCSECPKTFKTQLSLERHMFLIHSEKNDFPCEICNGLIRTKSLLDLHTEQHKNRGKPFACKECGKDFTRMYHLKRHHNFSSCGKQQVETMQCQVCQKEFFRLDNLRMHLKSHLGHGTPKKPEYTCPCCKKCFFSLSTLNIHIRTHTGERPFDCDLCDKSFPALVSLKKHRRCHTGEKPYTCSECNQHFAVKEVLNRHMRRHTGVKPHVCDECGKRFIQATQLKNHLRTHLRPYECSICDEKFKTEKQCEKHIKTHSKQSRSKTAGKYNCTDCGVSFNGRTALQKHEQTSKHIANAKKNCPECGELCANTKSLHFHMLKEHGATDIKCNKCDMEFWQFHLLQHHMKTVHNETNADKRKSRSEEEPVKKENDCIIIEEIIVDSLSSEAVIQASAAHEFTIIANSNGVVPEIKKPHTIKPCSPNLRAELKKSLADCLRKESPKKVTNENAMGNEDKQITENVGKLLDMLVDVETLVKFGWPDESVENVLCKVIENCGHKLHKRDFTEEYGTRMREFVKLLFTVVIQNDSIKELLNNYPIDEVIEFALLNDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522047;
90% Identity: iTF_01522047;
80% Identity: -