Basic Information

Insect: Volucella inanis
Gene Symbol: su(Hw)
Assembly: GCA_907269105.1
Location: OU026153.1:218258103-218273563[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00059 0.1 14.1 1.1 1 20 122 141 122 142 0.95

2 13 7.1e-06 0.0012 20.2 0.5 3 23 194 215 192 215 0.92

3 13 1.1 1.9e+02 3.8 0.1 1 23 221 243 221 243 0.94

4 13 2.7e-05 0.0046 18.3 3.6 1 21 250 270 250 271 0.94

5 13 3.1e-05 0.0053 18.2 1.7 2 23 283 304 282 304 0.97

6 13 0.00036 0.06 14.8 6.4 1 23 315 337 315 337 0.99

7 13 0.0016 0.27 12.8 2.1 1 21 343 363 343 365 0.94

8 13 1.1e-05 0.0019 19.6 2.2 1 23 371 393 371 393 0.99

9 13 1e-07 1.7e-05 26.0 1.5 1 23 399 421 399 421 0.98

10 13 0.00043 0.072 14.6 3.9 1 23 425 447 425 447 0.99

11 13 0.0016 0.27 12.8 0.2 1 23 459 483 459 483 0.91

12 13 0.87 1.5e+02 4.2 2.4 3 23 491 512 490 512 0.95

13 13 0.002 0.33 12.5 3.6 2 23 518 540 517 540 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00059	0.1	14.1	1.1	1	20	122	141	122	142	0.95
2	13	7.1e-06	0.0012	20.2	0.5	3	23	194	215	192	215	0.92
3	13	1.1	1.9e+02	3.8	0.1	1	23	221	243	221	243	0.94
4	13	2.7e-05	0.0046	18.3	3.6	1	21	250	270	250	271	0.94
5	13	3.1e-05	0.0053	18.2	1.7	2	23	283	304	282	304	0.97
6	13	0.00036	0.06	14.8	6.4	1	23	315	337	315	337	0.99
7	13	0.0016	0.27	12.8	2.1	1	21	343	363	343	365	0.94
8	13	1.1e-05	0.0019	19.6	2.2	1	23	371	393	371	393	0.99
9	13	1e-07	1.7e-05	26.0	1.5	1	23	399	421	399	421	0.98
10	13	0.00043	0.072	14.6	3.9	1	23	425	447	425	447	0.99
11	13	0.0016	0.27	12.8	0.2	1	23	459	483	459	483	0.91
12	13	0.87	1.5e+02	4.2	2.4	3	23	491	512	490	512	0.95
13	13	0.002	0.33	12.5	3.6	2	23	518	540	517	540	0.97

Sequence Information

Coding Sequence: ATGTTCCAATTGCGAGGAAGACGATTCGGAATACTTGCAGGTGATACAGAGGAGCAAACAGTGCTTATTATTCTTAACGTCAAAAAGGGACGAATAACAAGAAGTTCGAAACGTGCTATTCTCgattcagaaattaaaaaagaagaaaccgaTCCATCCGCGCCAACCGATCACTACTTATTAAAGGAAATTAAAGGCGACGATGAAGACGATATTGCATTTGTCCTCACAGAAAATTCATTTCATAATGAGAGTAGTCCACCACCTGAATGTGTTGAAGAAATTCACATTGAAGAAAACTTTAACGGTGAAGGCGATACTGATGAACATGACGACAATATTAACACAAAGGAAATTGTGGAGCATGTTTGTGGAAAATGTTATAAATCATTTCGCACGATTAAAGGATTGAAGCGCCACTTGGATTTTTGCAACTTCAACAGCGACGTTGTATTGCGAAGGGCAGAAATGTTgaagaatatagaaaaaatcgaaaaggaaGCTGTTATCATGGAGAAAAAAGACGTCTGTTTTTGCTGCGGCGATAGTTATGATACATGTCATTTAGGTCACATTAATTGCAGCGAGTGTccgaaaacatttaaaacacaaCTCAGCCTTGAACGTCATATGTTCCTTATTCACTccgaaaaaaatgattttccatGTGAAATTTGTAATGGGCTCATTCGGACCCAAACTTTACTTGATTTGCATACACAACAGCACAAAAACCGCGGCAAACCATTTGCTTGTAAAGAGTGTGGAAAAGATTTTACACGGATGTATCACTTGAAAAGACATCATAACTTTTCATCATGTGGTAAGCAACAAGTTGAAACGATGAAATGTCAAGTGTGTCAGAAGGAGTTCTTTCGCTTGGATAATTTACGTATGCATTTGAAATCGCACTTGGGCCATGGAACACCTAAGAAACCGGAATATACGTGCCCCTGTTGCAAGAAATGCTTTTTCAGTTTATCAACACTCAAtATTCATATTCGAACTCATACTGGCGAGAGACCTTTTGATTGTGACCTTTGTGACAAGAGTTTCCCAGCTTTAGTTTCTTTAAAGAAGCATAGGAGATGTCATACCGGTGAAAAGCCATACACTTGTTCAGAGtgtAATCAACATTTTGCTGTTAAGGAAGTACTTAACAGGCATATGCGACGCCATACGGGTGTAAAACCGCATGTTTGCGATGAATGTGGCAAGCGTTTTATTCAAGCCACCcagttgaaaaatcatttacgTACGCATTTGCGTCCTTATGAATGTCAAATATGTGATGAGAAATTCAAAACTGAAAAGCAATGtgaaaaacacttaaaaacgCATTCGAAACAATCAAGGAACAAGACCGCAGGGAAATACAATTGCCCTGACTGTGAGGTAAACTTTATTGGTCGAACTGCTCTACAAAAACACGAACAAACTTCAAAGCATattgCAAATGCAAAGAAGAATTGTCCTGAGTGTGGGGAACTTTGTGCAAATACTAAGTCTCTACATTTTCATATGCTTAAAGAACATGGAGCTACTGACATCAAGTGCAATAAATGTGGTATGGAATTTTGGCAATTCCATTTGTTGCAGCATCACATGAAAACTGTACACAACGAaacaaatgttgataaaaaaaaaagtcgatctGAAGAACAACCAGTTAAGAAGGAGAACGATTGTATAATTATTGAGGAGATCATTGTGGATTCTTTATCAAGTGAGGCAGTTATTCAAGCAAGCGCAACAAATGAATTTACTATAATTGCAAAAGATAATGGAGTTGTTCCCGAAATAAAGAAACCTCATACAATCAAACCATGTTCACCTAATCTGAGAGCTGAACTTAAAAAGTCACTAGCAGATTGTTTGCGAAAAGAGTCTCCTAAAGATGTTACGAATGAAAACACAATGGGCAATGAGGACAAGCAAATAACAGAGAATGTTGGGAAATTACTTGATATGCTGGTGGATGTGGAAACGCTTGTTAAATTTGGGTGGCCCGATGAATCTGTAGAAAATgttCTTTGTAAGGTAATAGAGAACTGTGGACATAAACTGCACAAAAGAGATTTTACTGAAGAGTATGGCACGAGGATGAGGGAATTTGTAAAACTTCTATTTACTGTAGTTATTCAAAATGATTCCATTAAGGAACTTCTAAATAATTACCCAATCGATGAGGTTATTGAATTTGCTCTtttaaatgatgatgatgattag
Protein Sequence: MFQLRGRRFGILAGDTEEQTVLIILNVKKGRITRSSKRAILDSEIKKEETDPSAPTDHYLLKEIKGDDEDDIAFVLTENSFHNESSPPPECVEEIHIEENFNGEGDTDEHDDNINTKEIVEHVCGKCYKSFRTIKGLKRHLDFCNFNSDVVLRRAEMLKNIEKIEKEAVIMEKKDVCFCCGDSYDTCHLGHINCSECPKTFKTQLSLERHMFLIHSEKNDFPCEICNGLIRTQTLLDLHTQQHKNRGKPFACKECGKDFTRMYHLKRHHNFSSCGKQQVETMKCQVCQKEFFRLDNLRMHLKSHLGHGTPKKPEYTCPCCKKCFFSLSTLNIHIRTHTGERPFDCDLCDKSFPALVSLKKHRRCHTGEKPYTCSECNQHFAVKEVLNRHMRRHTGVKPHVCDECGKRFIQATQLKNHLRTHLRPYECQICDEKFKTEKQCEKHLKTHSKQSRNKTAGKYNCPDCEVNFIGRTALQKHEQTSKHIANAKKNCPECGELCANTKSLHFHMLKEHGATDIKCNKCGMEFWQFHLLQHHMKTVHNETNVDKKKSRSEEQPVKKENDCIIIEEIIVDSLSSEAVIQASATNEFTIIAKDNGVVPEIKKPHTIKPCSPNLRAELKKSLADCLRKESPKDVTNENTMGNEDKQITENVGKLLDMLVDVETLVKFGWPDESVENVLCKVIENCGHKLHKRDFTEEYGTRMREFVKLLFTVVIQNDSIKELLNNYPIDEVIEFALLNDDDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522842; iTF_01521347;
90% Identity: iTF_01522842; iTF_01521347;
80% Identity: -