Basic Information

Insect: Volucella zonaria
Gene Symbol: -
Assembly: GCA_963966105.1
Location: OZ014530.1:72319629-72321384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00023 0.078 15.4 0.5 2 23 44 65 43 65 0.96

2 10 0.013 4.4 9.9 2.7 1 23 145 168 145 168 0.95

3 10 0.56 1.9e+02 4.8 1.6 2 21 176 195 175 196 0.79

4 10 7.4e-08 2.5e-05 26.4 1.2 1 23 245 267 245 267 0.95

5 10 3e-08 1e-05 27.6 1.6 1 23 274 296 274 296 0.99

6 10 6.7e-08 2.3e-05 26.5 1.2 3 23 311 331 310 331 0.99

7 10 1.6e-06 0.00054 22.2 0.4 1 23 337 359 337 359 0.99

8 10 5.4e-07 0.00019 23.7 0.2 1 23 365 387 365 387 0.98

9 10 9.9e-08 3.4e-05 26.0 1.0 1 23 391 413 391 413 0.99

10 10 0.015 5.1 9.7 0.6 3 19 419 437 418 443 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00023	0.078	15.4	0.5	2	23	44	65	43	65	0.96
2	10	0.013	4.4	9.9	2.7	1	23	145	168	145	168	0.95
3	10	0.56	1.9e+02	4.8	1.6	2	21	176	195	175	196	0.79
4	10	7.4e-08	2.5e-05	26.4	1.2	1	23	245	267	245	267	0.95
5	10	3e-08	1e-05	27.6	1.6	1	23	274	296	274	296	0.99
6	10	6.7e-08	2.3e-05	26.5	1.2	3	23	311	331	310	331	0.99
7	10	1.6e-06	0.00054	22.2	0.4	1	23	337	359	337	359	0.99
8	10	5.4e-07	0.00019	23.7	0.2	1	23	365	387	365	387	0.98
9	10	9.9e-08	3.4e-05	26.0	1.0	1	23	391	413	391	413	0.99
10	10	0.015	5.1	9.7	0.6	3	19	419	437	418	443	0.86

Sequence Information

Coding Sequence: ATGGCAGAGCAAAATTCTGAAAAGtcgaaaaaagaagaagactaTGAATTGGAAAAAATCGTCGTTAATCCGGATATTAAATCAGATATCGAGGAAGATGAGTGCATACCAAACGGTTTCAAAACAATTGAGTGCTTTATTTGCGGTTGTAGCTTGAGTAAAATCTATAATTTACGCGCTCACATGGCGTCACATGCAGAGGACGAAAACTTCGACGTTGAAGCCTTCAAGGAATCGGATATTTTCGATGTCCTGAACCCGCATAAAAGAAACATCGACTCAAACATAATTAAGAACTTTGTGATTCAGGAAATAAAAGCGAAACGTTACTCTCAGTTCTATTGCATTCTCAACGAAGCTGCAATTGAGTTGCATATCAGTGATTCTGAAACAGACTCTGACGAAGCTGGCGAATTGGTACCTCACAACAATTACCGATGTGAATTATGCAAAAAGAACTTTGATCGTCGGTataaagtgctgtttcatcaaaagACTGCGCACGATAAGTCAGACCTTACTGTCGAATGCGATTACTGTCTTAAGAAGTTTGTTTGTATGAATCTCTTGATCCATCACCTGAAAACGCAGTGCGAAAGTGATGAGAAACCAGTGCCTTGCACCGAACGGTTTATGAAATTTCTTCTCAAGGCCAATCTTGACTACTATGCCAGTTTAGCTCAAGCCAGAGAGCAACGAAAGCTTCACAAATTGACTGAAACTAAGAAGACATACATCTGTCCCATATGCAACAAAACTTTCACTCGTCAAGAACACTTGAATAGGCATAGTGCAGTGCACTTGCCCGATGAAATGAAATTCGAATGTCCTGTCTGTGATCGACGATTTAATCGAAAGGACAACATGCGATCACACATGAAGACCCACACCGAAGAGGGAGCACGTCACGCTGAGTCTCGAAAGATACTTTGCTCATATTGTGGCCGAAGTTTTAGTAGTAAATCTAATTACGTGGTACACATGCGCCGCCACACTggtgaaaaaccctacaaatgCGACGTATGTGGCAAGGGATTCCCCAAATCGACAGACTTAAACTCGCACAAAATTACCCATACAGGGGAGAAGAATTTCATTTGCACAATCTGTAATAAAGCTTTCGCAAGGTCGGCAGTTCTTTCGAAACATATGCGTGTGCATAGTGGCCCGTATCCATGTACTTTCTGCCAAAAGACTTTTACAAAACCAAGTGCACTTACGGTTCATTTACGAACGCATACAAACGGACGAGTGTGCTTTTGCATCATATGCAATAAGTCTTTCGAGACCAAGAACGAACTAGATGCTCATTTTGCTGCCACGGGGCATAATAACGAACCTAAGCGAGTGATCGTGGTGAAAGAGCCGCCGCCTAAAgtaaaaattacaaagaaaGTTGATGAAGAGCGAACTGTGCCATCTCCAACAGTATCACAAACGTTTGCACTAGAAATAAAGGCAAATGACGATCCCCTGGAAATCAAAGAGGAAGAATGGCGAACAACTAAAGTTAAAGTGCCTGTTAACGAAGCAATCCAGAGTGTCTTGCAAAGGTCCACCAACGCGAACACAGCTCCATCGGAGATTGTCGAAAATCCTGACGTATTGAAAGAGGAATCTGCAAAGTTGGAAAATAATGTGATGGCTTCTTTTTCTCCAATGGATGCTGGCTATGATGATGACATTCAATACAGCGATTGGTAA
Protein Sequence: MAEQNSEKSKKEEDYELEKIVVNPDIKSDIEEDECIPNGFKTIECFICGCSLSKIYNLRAHMASHAEDENFDVEAFKESDIFDVLNPHKRNIDSNIIKNFVIQEIKAKRYSQFYCILNEAAIELHISDSETDSDEAGELVPHNNYRCELCKKNFDRRYKVLFHQKTAHDKSDLTVECDYCLKKFVCMNLLIHHLKTQCESDEKPVPCTERFMKFLLKANLDYYASLAQAREQRKLHKLTETKKTYICPICNKTFTRQEHLNRHSAVHLPDEMKFECPVCDRRFNRKDNMRSHMKTHTEEGARHAESRKILCSYCGRSFSSKSNYVVHMRRHTGEKPYKCDVCGKGFPKSTDLNSHKITHTGEKNFICTICNKAFARSAVLSKHMRVHSGPYPCTFCQKTFTKPSALTVHLRTHTNGRVCFCIICNKSFETKNELDAHFAATGHNNEPKRVIVVKEPPPKVKITKKVDEERTVPSPTVSQTFALEIKANDDPLEIKEEEWRTTKVKVPVNEAIQSVLQRSTNANTAPSEIVENPDVLKEESAKLENNVMASFSPMDAGYDDDIQYSDW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542385;
90% Identity: iTF_01522037; iTF_01521337;
80% Identity: -