Vzon043787.1
Basic Information
- Insect
- Volucella zonaria
- Gene Symbol
- -
- Assembly
- GCA_963966105.1
- Location
- OZ014532.1:76153525-76154568[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-13 1.3e-10 42.8 0.0 3 41 100 139 98 142 0.89 2 3 5.2 2.7e+03 0.1 0.0 28 37 172 181 171 187 0.85 3 3 1.3e-08 6.9e-06 27.7 0.0 10 39 217 246 209 251 0.83
Sequence Information
- Coding Sequence
- ATGCCAGTTAAATCGACAGATGGCTCTGTCCCAACAAACGACCAGTTTCTAATATTTGAACTAAAGTCCAATACAGAACCGATGTATAACTACGTTATAACACAGGTTAAACCACCACCTCAAAATGATGGAGATCTCAAAAATTGGATCACTTCTGACTCTGTTGAATATCAAAAGGATCAAAGTCAGCAAAGTCCTCCTCCATATGTGATAAGTGTACAGATACCAGTAGAAGAGGACAAAGATGAAGCcaaagaaaatgcaaattcgGTAAAACTTAAACGTGCCTTTCGGCGGAAAAAGCTTGCAGAGGCCTTAGACGCTGTAGTCAATAAGCAACTGACAATAAGTAAGGCTGCCAGTGTCTTTGAGGTGACCAAAAGTACTCTTTGGAGAGAGGTTAACAAGTACACAAACCATCGGCGAAAAAAAGTCGACGAAGAGTTGAATAAAAAGATCGCTGATCGTATTTGTTCGGGGGAATCTTTATCAGTCATTTCAAAATCCCTAAAAGTTGCCAAGTCAACTTTACATCAACATAAAGTTCGACTAGCCCAACGAGGTCAATTACCGCCAAACGTCCCACTTAAAACGCCAACTCATCCTGCGGAGAAACTCGCAATGAAAGAGCGCATCATTCAAGCGTCTCGTGGTTGTCGTGTCAATGGAATGTCAATACGTTTTGCAGCAAAGTTCTTCTCAATACCACCGTCAACATTGTGGAAGCATATACGCCGTTTTCAAGCCTCCCAAAAGCGACATGCTGATATACATCAAGAGTGTATAGAAGTCGAGCCGATAGAAGTCAAAATAAAACTTCCCGATGAGGATACGGATGAGGATGGTAATGTGAATGAGGATGAAAACGCCAACAATGAGGAGAAGCAGGTAAAAACAACACCTATCAAGGAAATGGACTTAAACGACTTTGATGTGGACGCCTATTGCGAGCGACCAGAAGAAAATACTAGTGATGATGGTGACTTTTTGATAAGTTTTGACTTTGAAACATTTGAATCGTATGTTAAGAGAGAGTTCGACTAa
- Protein Sequence
- MPVKSTDGSVPTNDQFLIFELKSNTEPMYNYVITQVKPPPQNDGDLKNWITSDSVEYQKDQSQQSPPPYVISVQIPVEEDKDEAKENANSVKLKRAFRRKKLAEALDAVVNKQLTISKAASVFEVTKSTLWREVNKYTNHRRKKVDEELNKKIADRICSGESLSVISKSLKVAKSTLHQHKVRLAQRGQLPPNVPLKTPTHPAEKLAMKERIIQASRGCRVNGMSIRFAAKFFSIPPSTLWKHIRRFQASQKRHADIHQECIEVEPIEVKIKLPDEDTDEDGNVNEDENANNEEKQVKTTPIKEMDLNDFDVDAYCERPEENTSDDGDFLISFDFETFESYVKREFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520880;
- 90% Identity
- -
- 80% Identity
- -