Vina015718.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- nfxl1
- Assembly
- GCA_907269105.1
- Location
- OU026154.1:113704417-113707746[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.7e+04 -8.1 6.4 15 19 163 167 162 167 0.82 2 20 0.15 2.8e+03 -0.5 0.8 4 10 198 204 197 204 0.95 3 20 2.4e-08 0.00045 21.2 14.1 1 18 212 228 212 229 0.98 4 20 4e-07 0.0076 17.3 12.3 1 19 265 284 265 284 0.96 5 20 0.89 1.7e+04 -3.0 0.8 6 10 309 313 308 313 0.91 6 20 3e-10 5.5e-06 27.3 14.3 1 18 319 336 319 337 0.98 7 20 0.016 3e+02 2.6 1.2 6 12 362 368 361 368 0.94 8 20 5.3e-08 0.00099 20.1 10.8 1 18 372 389 372 390 0.96 9 20 0.48 9.1e+03 -2.1 0.3 1 4 399 402 399 403 0.89 10 20 7e-07 0.013 16.5 15.1 1 18 424 441 424 442 0.98 11 20 1.2e-07 0.0023 18.9 13.7 1 19 451 469 445 469 0.85 12 20 0.0003 5.7 8.1 11.8 9 18 514 523 505 524 0.89 13 20 0.0048 89 4.3 5.9 1 12 536 546 536 546 0.96 14 20 0.33 6.1e+03 -1.6 0.9 6 10 605 609 604 609 0.90 15 20 3.9e-06 0.072 14.2 5.7 1 12 615 626 615 626 0.97 16 20 1.7 3.2e+04 -3.9 1.1 15 18 639 642 639 643 0.86 17 20 0.0011 20 6.3 15.4 3 19 655 671 654 671 0.92 18 20 2 3.7e+04 -5.1 2.3 9 13 677 681 676 681 0.74 19 20 7.5e-07 0.014 16.4 11.9 1 16 722 736 722 742 0.87 20 20 0.63 1.2e+04 -2.5 0.5 11 16 772 777 772 778 0.80
Sequence Information
- Coding Sequence
- ATGTCCTCGCCAAGTATGTCAAAAGGTAATAAATCGTCCAAGTACCCTCCTAATATGTCTAAAAAggcggaaaagtccaataataAATTCCAAGATATTCAATGTAAAAACATGGAAATGGTTAAGAAAATTGTCGAAAACTACGAGTCTAGTTCCGATGAAGAACAACTCGATGGAGACAAAATCAGAGaaaaattatataaaaactaCTCTGGAGGAATTGATGAGTTAAAAAAATCTGCAGCCTTTTTGGAAAATGTCCTACAATCTGGTTCAGCTATATGTTTAATTTGTATTGGATCGGTTAAGAGAGCGGACGCAGTTTGGTCGTGCAAATATTGCTACTGTGTGTTTCATCTTTTGTGCATCAAACGCTGGGCAAACGATAGTATAGCTCTACTAAAAGGTAAAGGAAACGAGGAGCAAGGGTATTATAATAACTTGGGCACATATATTCCGAAGAAAATCAGAGCAGTGAAATGGTGTTGTCCGCAATGTCGTTGTGATTACGAACCAGAAGAGAGGCCGACGCGTTATGAATGCTTCTGTGGGAAGGAAGTTGATCCGGTGAATCAGGAGTGGATTGTGCCACATTCGTGTGGTGAGACGTGTGAGAAACCTTTACAACCAGAATGCGGTCATAAGTGCATGATACTTTGCCATCcaggTCCATGTCCGCCTTGTGCTCAGAGTGTAATAGCAAGTTGTAAATGTGGCAAATCACTACCAAAAGGATTACGTTGCTTTCAAAATGCTTGGACTTGCGGAACAAAGTGTTCTGAGATTCTTCCATGTGGTAAACATAAGTGCGATCAACTATGTCATGCTTCGAATGAGTGCCCGCCTTGTAGTAAGACAAgtcttcaaaaatgtatttgtgGAAATGAAGAAGCTATGAAAAGCTGCTCCCAAAGGTTGTGGCATTGTAAAAAGGTCTGCAATAAAAAGTATAGCTGTGGTATTCATAGTTGTAAGAAAGTTTGTCATGAAGGACCATGTGGACCGTGTGTTCTTAGTCTTCCAAGGACATGTCCTTGTGGTAAAAGTAAGAAGACTGCACCCTGTGATGAACCAATTGATATTTGTAATGAGACTTGTCATAAGTTATTATCATGTGGACAACACTATTGCAATCAACGATGTCACAAAGGGGAATGCAGCTTGTGCTTAATTATCACAAAGAAGAAATGTCGCTGTGGCATGCATGAAAAAGAGCTGGCTTGTTGGAAGGCCTTCAGCTGTGAAATCAAATGCAAAAGAATACGTGATTGTGGAAAGCATGCCTGTAACAAAAAGTGCTGTGATGGTCAGTGCGCACCATGTGATAAAGTTTGTGGGAAACCGCTTTCGTGTAGAAAACATAAATGTGCGTCTATATGTCATGACGGCCCTTGCTACCCGTGCAAATTAAAGTCACAAGTAAAGTGTCGCTGTGGAAGTACATCTGTTACTGTACCCTGTGGTAGGGAGCGTAGAGCGCGCGTTGTTTGTATGGAAATTTGTAGGATAACCTCTAAATGTCATCACCAAATCAAGCACAAATGCCACAAGGGTGACTGTCCCCCTTGTAACCAGAAATGTGGACTAGAAAACGACGTGACAAAATGTGGTCATATCTGTGAAGCTCGTTGTCATTCCGCAGTGCGGGTGCCCATTAAGAACTCACCAAGCGGTAATATATTCGATTACAAACTTGGAAATtacgaAATTCAATATCTGCCGCATccgaaatgtgaaaaaaaagtaatggtgACTTGTATTGGAGGTCATGAGCTTGCTGAATGGCCATGTTGGAATTCAAAACCCACATCGTGTCAACGGTTATGTGGTCGTAATTTAAAGTGCGGCAATCATAAATGTTCGCTTGTTTGTCATAGTGTATCCGACTTGAATGGGAAAGATCAACAAGAAGGCTGCGCACCGTGTCTAGAGGGATGTCAATTCGTACGTCCACCAGGTTGCACTCATCCTTGTAAACGATCATGTCATCCAGCACCATGTGATCCATGTTCCTCAGTAACGCGTACTCCATGTCATTGTGGATTGACTCAACTTATATTCAAGTGCTCAGAATACAACCCTGCAGATAGCAACTCAAGTGAAATCTTAGAACAacaagagaaattaaaaagcTGCGGAAGTCGTTGcatgaaaattTACCCATGTGGCCATCGATGTACATCCATTTGTCACTCTGGGTCATGTCCTAATCCAGAAAAATGTcgcaaaaaagttaaaatctaTTGCGAGTGCAAAcgaataaaaatggaaatttcttGTGAGAAGTCCCGTTTGGGAACAGTATCTCTCCCATGTGATGGTAACTGCCAAGCAACTAGAGAAGCTTTGGAGAAATCCACGCAAGAAGAAGCAGCAAAATTACGACAAGCTGAAGAAGATCGAAATCGCATTGAATTAGAACAGTTCGAAAAAAGGTTTGGCAAACGAAAACCTCGTGAACGTCGGGCTTTTACACAACAAATCAAAAGCAACGACAATCGAACAAAGTTTAATATTATCGGCGCAGTTTTATTAACTGTAACAATGGTTTTAGGTTTTTACTGGTACCAGTAA
- Protein Sequence
- MSSPSMSKGNKSSKYPPNMSKKAEKSNNKFQDIQCKNMEMVKKIVENYESSSDEEQLDGDKIREKLYKNYSGGIDELKKSAAFLENVLQSGSAICLICIGSVKRADAVWSCKYCYCVFHLLCIKRWANDSIALLKGKGNEEQGYYNNLGTYIPKKIRAVKWCCPQCRCDYEPEERPTRYECFCGKEVDPVNQEWIVPHSCGETCEKPLQPECGHKCMILCHPGPCPPCAQSVIASCKCGKSLPKGLRCFQNAWTCGTKCSEILPCGKHKCDQLCHASNECPPCSKTSLQKCICGNEEAMKSCSQRLWHCKKVCNKKYSCGIHSCKKVCHEGPCGPCVLSLPRTCPCGKSKKTAPCDEPIDICNETCHKLLSCGQHYCNQRCHKGECSLCLIITKKKCRCGMHEKELACWKAFSCEIKCKRIRDCGKHACNKKCCDGQCAPCDKVCGKPLSCRKHKCASICHDGPCYPCKLKSQVKCRCGSTSVTVPCGRERRARVVCMEICRITSKCHHQIKHKCHKGDCPPCNQKCGLENDVTKCGHICEARCHSAVRVPIKNSPSGNIFDYKLGNYEIQYLPHPKCEKKVMVTCIGGHELAEWPCWNSKPTSCQRLCGRNLKCGNHKCSLVCHSVSDLNGKDQQEGCAPCLEGCQFVRPPGCTHPCKRSCHPAPCDPCSSVTRTPCHCGLTQLIFKCSEYNPADSNSSEILEQQEKLKSCGSRCMKIYPCGHRCTSICHSGSCPNPEKCRKKVKIYCECKRIKMEISCEKSRLGTVSLPCDGNCQATREALEKSTQEEAAKLRQAEEDRNRIELEQFEKRFGKRKPRERRAFTQQIKSNDNRTKFNIIGAVLLTVTMVLGFYWYQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01523055;
- 90% Identity
- iTF_01521566;
- 80% Identity
- -