Vbom056175.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- nfxl1
- Assembly
- GCA_949129095.1
- Location
- OX422142.1:112011001-112014295[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 5 9.8e+04 -5.2 2.6 15 19 155 159 155 159 0.87 2 19 1.1 2.1e+04 -2.0 0.6 4 10 190 196 190 196 0.93 3 19 5.9e-08 0.0012 21.2 14.1 1 18 204 220 204 221 0.98 4 19 4.6e-06 0.09 15.2 13.5 1 18 257 275 257 276 0.97 5 19 2.2 4.3e+04 -3.0 0.8 6 10 301 305 300 305 0.91 6 19 6e-10 1.2e-05 27.6 13.7 1 18 311 328 311 329 0.98 7 19 0.04 7.8e+02 2.6 1.2 6 12 354 360 353 360 0.94 8 19 1.3e-07 0.0025 20.1 10.8 1 18 364 381 364 382 0.96 9 19 1.2 2.3e+04 -2.1 0.3 1 4 391 394 391 395 0.89 10 19 1.7e-06 0.034 16.5 15.1 1 18 416 433 416 434 0.98 11 19 3.1e-07 0.006 18.9 13.7 1 19 443 461 437 461 0.85 12 19 0.00063 12 8.4 11.5 9 18 506 515 497 516 0.89 13 19 0.012 2.3e+02 4.3 5.9 1 12 528 538 528 538 0.96 14 19 0.81 1.6e+04 -1.6 0.9 6 10 597 601 596 601 0.90 15 19 9.5e-06 0.19 14.2 5.7 1 12 607 618 607 618 0.97 16 19 5 9.8e+04 -4.6 2.2 15 19 631 635 631 635 0.84 17 19 0.0055 1.1e+02 5.3 16.2 3 19 647 663 646 663 0.92 18 19 5 9.8e+04 -5.0 2.3 9 13 669 673 668 673 0.74 19 19 9.1e-07 0.018 17.4 11.3 1 17 714 732 714 734 0.86
Sequence Information
- Coding Sequence
- ATGTCGAAAGGTGATAAATCGTCCAAGTACCCTCCCAATACGTCTAAAAAGTCcaataaaaaattccaagagaTTCAATGTAAAAACATGGAAATGGCTAAGAAAATTGTCGAAAACTACGAGTCTAGTTCTGATGAAGAACAACTGGATGGAGACAAAATCAGAGaaaatttatataaaaactacTCTGGAGGAATTGACGAGTTAAAAAAATCGGCAGCCTTTTTGGAAAATGTCCTACAGTCTGGTTCAGCTATATGTTTGATTTGTATTGGATCGGTTAAGAGAGCTGACGCAGTTTGGTCGTGCAAATATTGTTACTGTGTGTTTCATTTGTTGTGCATCAAACGCTGGGCAAACGATAGTATAGCTCTACTAAAAGGCAAAGGAAACGAGGAGCAAGGGTACTATAATAACTTGGGTGCATATATTCCGAAGAAAATAAAAGCGGTGAAATGGTATTGTCCGCAATGTCGTTGCGATTATCAACCAGAAGAGAGGCCGACACGTTATGAATGCTTCTGTGGGAAAGAAGTTGATCCGATGAATCAGGAGTGGATAGTACCACATTCGTGTGGTGAGGCGTGTGAGAAACCTTTACAGCCAGAATGCGGTCATAAGTGCATGATACTTTGTCATCCAGGTCCATGTCCGCCTTGTGCCCAGAGTGTAATAGCAAGTTGTAAATGTGGCAAATCACCACCAAAAGGATTACGTTGCTTTCAAAATGCTTGGACTTGCGGAACAAAGTGTTCTGAGATTCTACCATGCGGTAAACATAAGTGCGATCAACTATGTCATGCTTCAAATGAGTGCCCGCCTTGTGGTAAGACAAGTCTTCAAAAATGTGTTTGTGGAAACGAAGAAGCTATGAAAAGCTGCTCCCAAAGGGTGTGGCATTGTAAAAAGGTCTGCAATAAAAAGTATAGCTGTGGTATTCATAGTTGTAAGAAAGTTTGTCATGATGGACCATGTGGACCGTGTGTTCTTAGTCTTCCAAGGACTTGTCCTTGTGGTAAAAGTAAAAAGACTGCACCCTGTGATGAACCAATTGATATTTGTAATGAGACTTGTCATAAGTTATTATCATGTGGACAGCACTATTGTAATCAACGATGTCACAAAGGAGAATGCAGTTTGTGCTTAATTATTACAAAGAAGAAATGTCGCTGTGGCATGCATGAAAAAGAGTTGGCTTGTTGGAAGGCCTTCAGCTGTGAGATCAAATGCAAAATAATGCGGGATTGTGGAAAGCATGCCTGTAACAAAAAGTGCTGTGATGGTCAGTGCGCACCATGTGATAAGGTATGTGGGAAACCGCTTTCGTGTAGAAAACATAAATGTGCGTCTATATGTCATGACGGTCCTTGCTACCCGTGCAAATTAAAGTCGCAAGTAAAGTGTCGCTGCGGAAGTACATCTGTTACTGTACCTTGTGGTAGGGAACGTAGAGCGCGTGTTGTTTGTATGGAGATTTGTAGGATAACGTCTAAATGTCATCACCAAATTAAGCATAAATGCCACAAGGGTGACTGTCCCCCTTGTTACCAGAAGTGTGGACTAGAAAACGACGTGACAAAATGTGGTCATATCTGTGAAGCTCGTTGTCATTCCGCAGTGCGGGTGCCCATTAAGAACTTACCAAACGGTAATTTATTCAATTACAAACATGGAAACTATGAATTTCAATATCTGCCGCATCCAAAATGTGAGAAAAAAGTGATGGTGACTTGTGTTGGAGGTCATGAGATTGCTGAATGGCCATGTTGGAATTCAAAACCTACATCGTGTCAACGGTTGTGTGGTCGTAATTTAAAGTGCGGCAATCATAAATGTTCGCTTGTTTGTCATAGTGTACCCGATTTGAATGGGAAAGATCAACAAGAAGGCTGCGCACCGTGTCAAGAGGGATGCCAATTCGTACGTCCACCAGGTTGCACTCATCCTTGTAAACGATCATGTCACCCAACAccatgtgatccatgttcctcAGTAACACGTACTCCCTGTCATTGTGGATTGACTCAACTTATATTCAAGTGCTCAGAGTACAACCCTGCAGATGGCAACTCAAGTGAAATCTTAGAACGAcaagaaaagttaaaaagctGCGGAAGTCGTTGCATGAAAATCTACCCATGTGGCCATCGATGTTCATCCATTTGTCACTCCGGGTCATGTCCTAACCCAGAAAATTGtcgcaaaaaagttaaaatctATTGCGAGTGCAAGCGAATTAAAATGGAAATTTCTTGCGAGAAGTCCCGTTTGGGAACAGCCGCTCCTCCATGCGATGATAACTGCAAAGCAACTAGAGAAGCTTTAGAGAAATCGAAGCAACAAGAAGCAGCAAAACAACGACAAGCTGAGGAAGAACGTAATCGTATTGAATTGGAACAGTTCGAAAAGAGGTTTGGCAAACGAAAACCTCGTGAACGTCGGGCTTTTACACAACAAATCAAAAGCAACGACAATCGAACAAAGTTTATTATTATCGGTGCAGTTTTATTAACTGTAGCAATGGTTTTAGGTTTTTACTGGTACCAGTAA
- Protein Sequence
- MSKGDKSSKYPPNTSKKSNKKFQEIQCKNMEMAKKIVENYESSSDEEQLDGDKIRENLYKNYSGGIDELKKSAAFLENVLQSGSAICLICIGSVKRADAVWSCKYCYCVFHLLCIKRWANDSIALLKGKGNEEQGYYNNLGAYIPKKIKAVKWYCPQCRCDYQPEERPTRYECFCGKEVDPMNQEWIVPHSCGEACEKPLQPECGHKCMILCHPGPCPPCAQSVIASCKCGKSPPKGLRCFQNAWTCGTKCSEILPCGKHKCDQLCHASNECPPCGKTSLQKCVCGNEEAMKSCSQRVWHCKKVCNKKYSCGIHSCKKVCHDGPCGPCVLSLPRTCPCGKSKKTAPCDEPIDICNETCHKLLSCGQHYCNQRCHKGECSLCLIITKKKCRCGMHEKELACWKAFSCEIKCKIMRDCGKHACNKKCCDGQCAPCDKVCGKPLSCRKHKCASICHDGPCYPCKLKSQVKCRCGSTSVTVPCGRERRARVVCMEICRITSKCHHQIKHKCHKGDCPPCYQKCGLENDVTKCGHICEARCHSAVRVPIKNLPNGNLFNYKHGNYEFQYLPHPKCEKKVMVTCVGGHEIAEWPCWNSKPTSCQRLCGRNLKCGNHKCSLVCHSVPDLNGKDQQEGCAPCQEGCQFVRPPGCTHPCKRSCHPTPCDPCSSVTRTPCHCGLTQLIFKCSEYNPADGNSSEILERQEKLKSCGSRCMKIYPCGHRCSSICHSGSCPNPENCRKKVKIYCECKRIKMEISCEKSRLGTAAPPCDDNCKATREALEKSKQQEAAKQRQAEEERNRIELEQFEKRFGKRKPRERRAFTQQIKSNDNRTKFIIIGAVLLTVAMVLGFYWYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01523055;
- 90% Identity
- iTF_01523055; iTF_01522262;
- 80% Identity
- -