Basic Information

Gene Symbol
ct
Assembly
GCA_907269105.1
Location
OU026156.1:153849067-153930664[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 2.4e-22 79.8 0.0 3 71 756 825 754 831 0.94
2 3 5.1e-32 9.5e-28 97.1 0.0 3 77 1179 1254 1177 1256 0.96
3 3 6.8e-31 1.3e-26 93.5 0.0 3 77 1392 1467 1390 1469 0.96

Sequence Information

Coding Sequence
ATGCAGCCAACATTACCACCAACAGCCGGGACAGCCGATATGGATTTGACGGCTGTTCAATCAATGGATTGGTTATTTAAAAAGGAGCGAATCTATCTATTGGCACAATTCTGGCAACAGagAGCTACTTTGGctgaaaaagaaatcaacacCTTAAAGGAACAATTGTCTACGGCTTGTACCACAGCAACAACGACAACAAATTTTACATCTTCGACAATAACTACAACTGCATCTTCAATACATTCATCGCCGCCATCCCCATCATCGCATTTACAAAACGGAAATTTATTAGCGGCAACACCGTCGCCATCACCGCCACTATCCGAAAACGGCAGCACCCTCAACGGTTGTCTTGGTTCAGCGAAATTGCTCTTCAATCATAGTCAAATAATGGACACTAACACATCGAACGCAGTAGCTACTGATAGTCCAATAGCATTAGTTACGACTACAGCCGCCAATACGCTACTGGGTGGTGTTACAACGGATGCTAGCAAACTTATAACGGCAATGACAGCTGAAATGAACCTCCACCAAGACTCAAGCGAGTCCGCGGCAACATTGACGAGCAATTTAACGTCAATTCGATCGCACAGCCCTCACCGCTCTGCCGAGGGCGGGAGTACATACGAGGCAACacgaaacaataataataataatagtactAGTAACAATAATAAGAATACCAGTAGTAATAGCAGTAGTAGTTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTAAATCGACTGCAAGCCCTCCAAGAAACCCATATTGTACAAATACAAAGACTTGAAGATAATTTGGAAGCAAAACGTCAGCATATTCAAAGACTAGAGACACGATTGGAAAACCAACAATCAAAAGATGATGATCCTGTTGTGCTCAAATCAAATCCAGATCTATATCAGGATAATGAAGAAACGCAAGATCCGGCCGTTCCCTCGTCTGAAATACCAGCAACAATGGAGGAAATCCGcataaaaaaggagaaacaATCATCAGCGACAACGCTGGGACTCGATATTACATGTCAGCCTGCGGCATCTGCCTCCGTCTCTGTCTCTGCCTCTATAGCGGCAACAAGTGAACCCAAGCAGTTTCAAGAATTACTGCTTGAAAGAACTAAAGCATTAGTGGCTTCTACTGAGGCCCTTAAACCTGAAGGAATTTCTAATGACACCGCATTGACAGAAACTCCTAAGCCATCTGAAAGTGAGCCTGCAGCATGTGTGGGCCTTAGCGCTGAACCGAACGATTCAAGTTTGCAGCAGCAACCAGCAATTTCATCAGAATCAGTTGCATCTTCTGCCCTTGTAGAAGAAAGTCcatcatcaaattttgaaagtgttGATCAGTTTGGTTCACTGCTTGGTGGTGAGTTGGTCAATTCGTATTGGAGACGTGGTTTTGATTTTTCGGCGCTGCCACTGGCTCCGCCGCCTCCACTACCTACACAACAGCCATCAGTAGCAACAGCCGCAGTATCGATGCCGCAATCACCACCATCAAAAGCGATAGCtattcaaaattctaaaacGCCAACATCAATATTCCAAAATTTCCCACCATTTTCAATGCCCCCCACGGGACCATCAACTACCACTCTCTTGAAACAGCTAGTGAATTCCACCTTCTCATCCAATCCAACTCCTTCTCTTCGAACAGATACCCATTCTTCGTTGACATCGTCGTCCTTGTCAACGACTACAACTTCGGCCGTACACCTGCAACAGCCTTcgcaccatcatcatcatcttcagcATTCTGCCCTACAACAGCACCCAcagcatcaacaacatcaacagcaacaacagcttcaaaatcaaaatcaacaccagcaacaacatcagcatcaACATCAGCATCAGCACCAGGACTATGAAAAAGCCAATAGCCATCATGATTCTTCGTCGACGGCGAGTACACCCAATCTGCAAGATCAGCGTTCCAACGACGAGCCTATGAACAGTGTAAAGTCAATCAAGGCAACCCAAGAAGATAACAACAATTCATTAGGTTCCTTGGCACATTTACCACCATCATTCCTGCCAGGTCTACCATTTCAATTCCAAGAACGAGGTCATTTTCGCTTTGCCGAAGATATTCAACTTCCGCCTGGTGCCTCAATGGCTGGTCGCCTTGGAGAATCTCTTATACCAAAAGGTGATCCTATGGAGGCTAAACTTCAGGAAATGCTACGCTACAACATGGACAAGTATGCAAATCAAAGTCTGGATACACTACACATATCACGCCGAGTACGAGAACTTCTTTCTGTGCATAACATTGGTCAGAGGCTCTTTGCAAAATATATCCTCGGATTGTCTCAAGGCACTGTTTCGGAGTTGCTTTCCAAGCCGAAACCCTGGGATAAATTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTTAAGTCGTTGATACCCAAAAAAGactcaGGTATGCCCCAATATGGTCGTAATGAGGATTCTATGTCGGATGATCGCATTGCACATATCTTAAATGAAGCTTCCAGCCTTATGAAAACGCCACAGGGACCGGGTTCCCAGCTCCAACAGCAAATGCAACATGAAGCTCAACGTCAACAGCAGCAATCTTCCGGACTTGAGGATTCGCACAGTAACGAGGACTCCAAGTCACCACATACCTCATGTACTTCCCCGTTTTACAAAGAATCACCAgtgcaacaacagcagcagcaacagcaacaacaacaacagcgacaAGACATCCAACGGCGAAGTATGAAAACTGATGAAATGTCTCAAGATAAAATGGCCCGAATATACCAGGAGGAATTGGCAAAACTTATGAATCGCACGCCACGCGACACATTTCCAAGCTTTCTGTTTCCACACTTTTTTAGTGCGGCTGGTGGCCTTCCGCCCGCCAACAATTCTATGCCACCTGACGACAATATTCGCATGGCCTTTGAAGCATATCACCGCGAAATGGCGAAGTTGCAGCAGACCAGCACTGGACAACTTCctaattttccaaatttctctAGCTTGATGGCTTTGCAACAACAAGTTCTGAATGGTGCTCAGGATCTCTCAGTGCCCAAGGAACACGAAATTAAAGTAAATGGACAGCGTAATTCAATGGAGAACTGCGAATCTAATCAAACCAAAGAAACCAATGAAGAGGCAGGATTGCGCCACTCAAGTGCATTTAGCTTAGTTCGCAACAAATCAGAATCCACACCAGTACCGAGTTCTAATtccaatacaaatacaaactcAACGGCTCCCAGCCCTCTCAGCAATTCAATTTTACCACCGGCTATGACACCAACGGAAGACTTTTCAACGGCTGCAAGTCCGTTACAGCGAATGGCGTCAATTACGAACTCACTTATCACACAACCTCCGGTAACGCCACACCACACTCAGCCGCAACGACCTACTAAGGCCGTGCTACCACCCATCACTCAACAACAGTTTGACATGTTTAACAACTTAAATACCGAAGACATCGTCCGTCGAGTAAAAGAAGCATTGTCTCAGTATTCCATCAGCCAACGATTATTTGGAGAATCGGTGCTTGGGCTTTCACAAGGATCTGTGTCTGATCTTCTGGCAAGACCAAAACCTTGGCACATGTTGACACAGAAGGGACGTGAGCCTTTCATTCGAATGAAAATGTTTCTAGAAGATGAAAATGCAGTTCATAAACTTGTGGCCAGCCAGTATAAGATTGCTCCCGAAAAACTGATGCGCACAGGCAGTTATAGTGGCAGTCCGCAAATACCACAGGGTTTAGCTAATAAGATGAATAGCATTCCTATGCAGAAGATGATGAATGAGCTCAAGATGCAGGAACCACAAGCACAACATATAATGCAACAGATGCAAGCTGCTTCTGCTATGGCTGCAGCCGCTGCTGCAGGTCACATGCAAAATGCTCAACATCAAGGTATGCTACTTACTACCCCAGGACTTCCACCCCAACATGCTATAAGTCTTCAACAGGCTGCCAATGAAAAGAAGCCAATGATAATGCCAATCCACTCACCACACCAAGCCAACGTTATGAGAAGCAGCATGCATCAACATATGTCTCCGACCGTTTATGAGATGGCTGCTCTCACCCAAGACCTAGATACACAGGTAAtaactacaaaaataaaagaagcccTATTAGCAAATAACATCGGGCAGAAAATTTTTGGCGAAGCAGTTCTTGGCCTATCACAAGGTTCTGTGTCAGAGTTGCTTTCAAAACCGAAGCCTTGGCATATGTTGAGCATAAAAGGCCGTGAGCCTTTCATACGAATGCAATTATGGCTCTCTGATGCAAACAATGTTGAGAGGCTACAAGTGTTAAAAAATGAACGGCGCGAAGCAAGCAAGCGTCGTCGATCAACAGGTCCCAATCAACAAGACAACAGTTCTGATACCAGCAGCAACGACACAGCTGATTTTTACACCAGTAGTCCTGGTCCAGGTTCGGTAGGCTCCGTTGGTGCGCCACCTAACAAAAAGCAACGAGTTCTATTCTcagaagaacaaaaagaagcacTTCGATTAGCTTTTGCCCTTGATCCATATCCAAATGTAGGTACAATTGAGTTTCTGGCAAACGAGCTGGGTTTAGCAACGCGCACCATCACCAACTGGTTTCACAATCACAGAATGCGTCTCAAGCAACAAGTACCTCATGGACAGCCCACAGAACCGGTGCCAACTAGGGAAAACACCAACTCAACACCATTTGACCCGGTTCAATTTCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAACGCATGGGTCTTAGTGGCACTCCAATTCCCTATCCACCATACTTTGCTGCGAACCCCAACTTAGCGGCGCTCATCGGTCGTGGACTTCTTCCTGGTGGAGGTGAACCTGACCTTCAAGCCCTTAACAACGCATTCAAAGAACAAATGAGTGGCCTAGATCTATCTTTAAAGCGTGAACGTGACGATGATTTTGAAGATGACGGCGAAGGTGACAGCCATCTGTCTGACAATGAATCAGTAAATGGCAGCGATGAAAAGTCCGAAATGAGTGAAACTCCTCGTTCTTCCCTTTCTGGAACGGGCATGCAATCACGAACTTCACGACGCAAACCAGCTGCTCCCCAATGGGTTAATCCCGACTGGCAGGGAGATGGTAAATCAGGACTAATAGCACCAATCCCCACCACGGCTACcgaaaaagaaattatcatcAACGGCGTATGTGTGATGCAGCAACAAGCGGCCGACTATAGTCAAAAATCAAATGCCACGGAAGATGACGAGGAAGCTACGTCCGATGGCAATGATGACGAACACTCATCCGGCCATGTCCATCATCGTACACAAATTTCGGATTGCGATGATCCCACCGCGGACATTGATCAACGATTTATGGAACCCGAGGTTCGAATCAAACAAGAAGAAGACTGTGACACCAACGATAGCCACCAAGATGATCAAGATTCAGAATTGAGAAAGCCATCACACCACCGCGATGAGGAGGACGATACCCCTGGTGCTTGGAATTACTAA
Protein Sequence
MQPTLPPTAGTADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEINTLKEQLSTACTTATTTTNFTSSTITTTASSIHSSPPSPSSHLQNGNLLAATPSPSPPLSENGSTLNGCLGSAKLLFNHSQIMDTNTSNAVATDSPIALVTTTAANTLLGGVTTDASKLITAMTAEMNLHQDSSESAATLTSNLTSIRSHSPHRSAEGGSTYEATRNNNNNNSTSNNNKNTSSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHIQRLETRLENQQSKDDDPVVLKSNPDLYQDNEETQDPAVPSSEIPATMEEIRIKKEKQSSATTLGLDITCQPAASASVSVSASIAATSEPKQFQELLLERTKALVASTEALKPEGISNDTALTETPKPSESEPAACVGLSAEPNDSSLQQQPAISSESVASSALVEESPSSNFESVDQFGSLLGGELVNSYWRRGFDFSALPLAPPPPLPTQQPSVATAAVSMPQSPPSKAIAIQNSKTPTSIFQNFPPFSMPPTGPSTTTLLKQLVNSTFSSNPTPSLRTDTHSSLTSSSLSTTTTSAVHLQQPSHHHHHLQHSALQQHPQHQQHQQQQQLQNQNQHQQQHQHQHQHQHQDYEKANSHHDSSSTASTPNLQDQRSNDEPMNSVKSIKATQEDNNNSLGSLAHLPPSFLPGLPFQFQERGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMQHEAQRQQQQSSGLEDSHSNEDSKSPHTSCTSPFYKESPVQQQQQQQQQQQQRQDIQRRSMKTDEMSQDKMARIYQEELAKLMNRTPRDTFPSFLFPHFFSAAGGLPPANNSMPPDDNIRMAFEAYHREMAKLQQTSTGQLPNFPNFSSLMALQQQVLNGAQDLSVPKEHEIKVNGQRNSMENCESNQTKETNEEAGLRHSSAFSLVRNKSESTPVPSSNSNTNTNSTAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMIMPIHSPHQANVMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPTRENTNSTPFDPVQFRILLNQRLMELQKERMGLSGTPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESVNGSDEKSEMSETPRSSLSGTGMQSRTSRRKPAAPQWVNPDWQGDGKSGLIAPIPTTATEKEIIINGVCVMQQQAADYSQKSNATEDDEEATSDGNDDEHSSGHVHHRTQISDCDDPTADIDQRFMEPEVRIKQEEDCDTNDSHQDDQDSELRKPSHHRDEEDDTPGAWNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
80% Identity
iTF_01521769;