Basic Information

Gene Symbol
ct
Assembly
GCA_949129095.1
Location
OX422143.1:535323-572263[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-26 5.7e-22 79.9 0.0 3 71 627 696 625 702 0.94
2 3 7e-32 2.3e-27 97.2 0.0 3 77 1044 1119 1042 1121 0.96
3 3 9.3e-31 3e-26 93.6 0.0 3 77 1257 1332 1255 1334 0.96

Sequence Information

Coding Sequence
ATGGACACCAACACATCGAACGCAGCAGCAACTGATAGTCCAATAGCATTAGTTACGACAACCGCCGCCAATACGCTACTGGGTGGTGTCACAACAGATGCTAGCAAACTTATAACGGCAATGACAGCCGAAATGAACCTCCACCAAGACTCAAGCGAGTCCGCGGCAACATTGGCGAGCAATTTAACGTCAATTCGATCGCACAGCCCTCACCGCTCAGCCGAGGGCGGGAATACATACGAGGCAACacgaaacaataataataataataatagtactaGTAACAATAATAAGAATACCAGTAGTAATAGCAGTAGTAGTTGTAATAATAATTTAGCTGATGAATTGGctgccaaagagaaagagATTAAAGCACTTATCGACGAGGTAAATCGACTGCAAGCCCTCCAAGAAACCCATATTGTACAAATACAAAGACTTGAAGATAATTTGGAAGCAAAACGTCAGCATATTCAAAGACTCGAAACACGATTGGAAAACCAACAATCAAAAGATGATGATCCTGTTGTGCTCAAATCAAGTCCAGATCTATATCAGGATAATGAAGAAACACAAGTTCCGGCTGTTCCCTCGTCTGAAATACCAGCAACAATGGAGGAAATCCgcataaaaaaggagaaacaATTATCAGCGACAACACTGGGTCTCGATATTACATGTCAGCCTGCGGCATCTGCCTCCGTCTCTGCCCCTGCCCCTGTAGCGGTAACAAGTGAACCCAAGCAGTTTCAAGAACTACTGCTTGAAAGAACTAAGGCATTAGTGGCTTCTACTGAGGCCCTTAAGCCAGAAGGAATTTCTAATGACACCGCATTGACAGAAACTCCTAAGCCATCTGAAAGTGAGCCTGCAGCATGTGTGGGCCTCAACGCTGAACCGAACGATTCAAGTTTGCAGCAACAACCAGCAATTTCATCAGAATCAGTTGCATCTTCTGCCCTCGTAGAAGAAAGTCcatcatcaaattttgaaagTGTTGATCAGTTTGGTTCGCTGCTTGGTGGTGAGTTGGTCAATTCGTATTGGAGACGTGGTTTTGATTTTTCGGCACTGCCATTGGCTCCGCCGCCTCCACTACCTACACAACAGCCATCAGTAGCAACAGCAGCAGTGTCGATGCCGCAATCATCACCATCAAAAGCGACAGCGATTCAAAATTCTAAAACGCCAACATCAATATTCCAAAATTTCCCACCATTTTCAATGCCCCCCACGGGACCATCAACCACCACTCTCTTGAAACAGCTAGTCAATTCCACCTTCTCATCCAATCCAACTCCTTCTCTTCGAACAGATACCCATTCTTCGTTGacatcgtcgtccttgtcaacGACTACAAGTTCGGCCGTACACCTTCAACAGCCTTcgcaccatcatcatcatcttcagcaTCCTGCCCTACAACAGCACCCacagcatcaacaacatcaacagcaccAACATCAAagtcaacaccagcaacaacatcagcatcaacatcagcatcagcatcagcatcagcaccaGGACTATGAAAAAGCCAATAGCCATCATGATTCTTCGTCGACGGCGAGTACACCCAATCTGCAGGATCAGCGTTCCAACGACGAGCCTATGAACAGTGTTAAGTCAATCAAGGCAACCCAAGAAGATAACAACAATTCATTAGGTTCCTTGGCACATTTACCACCATCATTCCTGCCAGGTCTACCATTTCAATTCCAAGAGCGAGGTCATTTTCGCTTTGCTGAAGATATCCAACTGCCGCCTGGTGCCTCAATGGCTGGTCGCCTTGGAGAATCTCTTATACCAAAAGGTGATCCCATGGAGGCTAAGCTTCAGGAAATGCTACGCTACAACATGGACAAGTATGCCAATCAAAGTCTGGATACACTACACATATCACGCCGAGTACGAGAACTTCTTTCTGTGCATAACATCGGTCAGAGGCTCTTTGCAAAATATATCCTCGGATTGTCTCAAGGCACTGTTTCGGAGTTGCTTTCCAAGCCGAAGCCCTGGGATAAATTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTTAAGTCGTTGATACCCAAAAAAGacTCAGGTATGCCACAATATGGTCGTAACGAGGATTCTATGTCGGATGATCGCATTGCACATATCTTAAATGAAGCTTCCAGCCTTATGAAAACGCCACAGGGACCGGGTTCACAGCTACAACAGCAAATGCAACATGAAGCTCAACGACAACAGCAGCAATCTTCCGGACTTGAGGACTCGCACAGTAACGAGGACTCCAAGTCACCGCATACCTCATGCACTTCTCCGTTTTACAAAGAATCGCCAgtgcaacaacagcagcagcaacagcaacaacaacaacagcaacagcgacAAGACATCCAACGGCGAAGTATGAAACCTGATGAAATGTCTCAAGATAAAATGGCGCGAATATACCAGGAGGAATTGGCAAAACTTATGAATCGCACGCCACGCGATACATTTCCAAGTGCGGCTGGTGGCCTTCCGCCCGCCAATAATGCTATGCCACCTGACGACAATATTCGCATGGCCTTTGAAGCATATCACCGCGAAATGGCGAAGTTACAGCAGACCAGTACTGGACAACTTCccaattttccaaatttctcCAGCTTGATGGCCTTGCAACAACAAGTTCTGAATGGTGCCCAGGATCTCTCAGTGCCTAAGGAACACGAAATTAAAGTAAACGGACAACGTAATTCGATGGAGAACTGCGAATCTAATCAAACCAAAGAAACCAATGAAGAGGCGGGATTGCGCCACTCAAGTGCATTTAGCTTAGTTCGCAACAAATCAGAATCCACACCAGTACCGAGTTCTAATTccaatacaaatacaaactcAGCGGCTCCCAGCCCTCTCAGCAATTCAATTTTACCACCGGCTATGACACCAACGGAAGACTTTTCAACAGCTGCAAGTCCCTTACAGCGAATGGCATCAATTACAAACTCACTTATCACACAACCTCCGGTAACGCCACACCATACTCAGCCGCAACGGCCTACAAAGGCCGTGCTACCACCCATCACTCAGCAACAATTTGACATGTTTAACAACTTAAATACCGAAGACATCGTCCGTCGAGTAAAAGAAGCATTGTCTCAGTATTCCATCAGTCAAAGATTATTTGGAGAATCGGTGCTTGGACTTTCACAAGGATCTGTGTCTGATCTTCTGGCAAGACCAAAACCTTGGCACATGTTAACACAAAAGGGACGTGAGCCCTTCATCCGAATGAAAATGTTTCTAGAAGATGAAAATGCGGTTCATAAACTTGTTGCCAGCCAGTATAAGATTGCTCCCGAAAAACTGATGCGCACAGGCAGTTACAGTGGCAGTCCGCAAATACCGCAGGGTTTAGCTAACAAGATGAATAGCATTCCTATGCAGAAGATGATGAACGAGCTCAAGATGCAGGAACCACAAGCGCAACATATTATGCAACAGATGCAAGCTGCTTCTGCAATGGCTGCAGCCGCTGCTGCAGGTCACATGCAAAATGCTCAACATCAAGGTATGCTACTTACTACCCCAGGACTTCCACCCCAACATGCTATAAGCCTTCAACAGGCTGCCAACGAAAAGAAGCCAATGATAATGCCAATCCACTCACCACATCAAGCGAACGTTATGCGAAGCAGCATGCATCAACACATGTCTCCGACCGTTTATGAGATGGCTGCTCTCACCCAAGACCTAGATACACAGGTAAtaactacaaaaataaaagaagcccTATTAGCAAATAACATCGGGCAGAAAATTTTTGGCGAAGCAGTTCTTGGCCTATCACAAGGTTCTGTCTCAGAGTTGCTTTCAAAACCGAAGCCTTGGCATATGTTGAGCATAAAAGGCCGTGAGCCTTTCATACGAATGCAATTATGGCTTTCTGATGCAAACAATGTTGAAAGGCTACAAGTGTTAAAAAATGAACGGCGCGAGGCAAGCAAGCGTCGTCGATCAACAGGTCCCAATCAACAAGATAACAGTTCTGATACCAGCAGCAACGACACGGCTGATTTTTACACCAGTAGTCCTGGTCCAGGTTCGGTAGGCTCCGTTGGTGCACCACCTAACAAAAAGCAACGAGTTCTTTTCTCAGAAGAACAAAAAGAGGCACTTCGATTAGCGTTCGCTCTTGATCCATATCCAAATGTGGGAACAATTGAGTTTCTTGCCAATGAGCTGGGTTTAGCAACACGCACCATCACCAACTGGTTTCACAATCACCGAATGCGTCTCAAGCAACAAGTACCCCATGGACAGCCCACAGAACCGGTTCCAACTAGAGAAAACACCAACTCCACACCCTTTGACCCGGTTCAATTTCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAGGAACGCATGGGTCTTAGTGGCACTCCAATTCCCTATCCACCGTACTTTGCTGCGAACCCCAATTTAGCGGCGCTCATCGGTCGTGGACTTCTTCCTGGTGGAGGTGAACCCGATCTTCAAGCCCTTAACAACGCATTCAAAGAACAAATGAGTGGCCTAGATCTATCTTTAAAGCGTGAACGTGATGATGATTTTGAAGATGACGGCGAAGGTGATAGCCATCTGTCTGACAATGAATCAATAAATGGCAGCGATGAAAAGTCCGAAATGAGTGAAACTCCGCGTTCTTCCCTTTCTGGAACGGGCATGCAATCACGAACTTCACGACGCAAACCAGCTGCTCCCCAATGGGTTAATCCCGACTGGCAGGGAGATGGTAAATCAGGACTAATAGCACCAATTCCCACCGCGGCtaacgaaaaagaaattatcatcaacGGCGTATGTGTGATGCAGCAACAAGCGGCCGACTATAGTCGAAAATCAAATGCCACCGAAGACGACGAGGAAGCTGCGTCCGATGGCAACGATGACGAACACTCATCCGGCCATGTCCATCATCGTACACAAGTTTCAGATTGCGATGATCCCCCCGCGGACATTGATCAACGATTCATGGAACCTGAGGTTCGAATCAAACAAGAAGAAGACTGTGACACCAACGATAGCCACCAAGATGATCAAGATTCCGAATTGAGAAAGCCCTCACACCACCGCGATGAGGAGGACGATACCCCCGGTGCATGGAATTACTAA
Protein Sequence
MDTNTSNAAATDSPIALVTTTAANTLLGGVTTDASKLITAMTAEMNLHQDSSESAATLASNLTSIRSHSPHRSAEGGNTYEATRNNNNNNNSTSNNNKNTSSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHIQRLETRLENQQSKDDDPVVLKSSPDLYQDNEETQVPAVPSSEIPATMEEIRIKKEKQLSATTLGLDITCQPAASASVSAPAPVAVTSEPKQFQELLLERTKALVASTEALKPEGISNDTALTETPKPSESEPAACVGLNAEPNDSSLQQQPAISSESVASSALVEESPSSNFESVDQFGSLLGGELVNSYWRRGFDFSALPLAPPPPLPTQQPSVATAAVSMPQSSPSKATAIQNSKTPTSIFQNFPPFSMPPTGPSTTTLLKQLVNSTFSSNPTPSLRTDTHSSLTSSSLSTTTSSAVHLQQPSHHHHHLQHPALQQHPQHQQHQQHQHQSQHQQQHQHQHQHQHQHQHQDYEKANSHHDSSSTASTPNLQDQRSNDEPMNSVKSIKATQEDNNNSLGSLAHLPPSFLPGLPFQFQERGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMQHEAQRQQQQSSGLEDSHSNEDSKSPHTSCTSPFYKESPVQQQQQQQQQQQQQQRQDIQRRSMKPDEMSQDKMARIYQEELAKLMNRTPRDTFPSAAGGLPPANNAMPPDDNIRMAFEAYHREMAKLQQTSTGQLPNFPNFSSLMALQQQVLNGAQDLSVPKEHEIKVNGQRNSMENCESNQTKETNEEAGLRHSSAFSLVRNKSESTPVPSSNSNTNTNSAAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMIMPIHSPHQANVMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPTRENTNSTPFDPVQFRILLNQRLMELQKERMGLSGTPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGTGMQSRTSRRKPAAPQWVNPDWQGDGKSGLIAPIPTAANEKEIIINGVCVMQQQAADYSRKSNATEDDEEAASDGNDDEHSSGHVHHRTQVSDCDDPPADIDQRFMEPEVRIKQEEDCDTNDSHQDDQDSELRKPSHHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_01521666;
80% Identity
iTF_01520847;