Basic Information

Insect: Volucella bombylans
Gene Symbol: -
Assembly: GCA_949129095.1
Location: OX422141.1:8265965-8268996[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.028 12 8.9 0.2 2 23 108 130 107 130 0.96

2 20 0.00084 0.36 13.7 0.8 1 23 136 158 136 158 0.98

3 20 4.8e-05 0.02 17.6 0.5 2 23 167 188 166 188 0.97

4 20 0.0018 0.76 12.7 0.9 1 23 194 217 194 217 0.96

5 20 0.0023 0.98 12.3 1.6 1 22 249 270 249 271 0.91

6 20 2.9e-06 0.0013 21.4 1.7 1 23 277 299 277 299 0.97

7 20 3.4e-06 0.0014 21.2 1.0 1 23 305 328 305 328 0.97

8 20 0.0034 1.5 11.8 2.7 1 23 338 361 338 361 0.95

9 20 6.3e-05 0.027 17.3 1.3 3 23 454 474 454 474 0.97

10 20 7e-07 0.0003 23.4 0.5 1 23 480 502 480 502 0.98

11 20 0.09 38 7.3 0.0 1 23 509 533 509 533 0.90

12 20 0.0047 2 11.4 1.4 1 19 539 557 539 560 0.90

13 20 0.065 28 7.8 2.3 1 23 598 620 598 620 0.97

14 20 5.5e-05 0.023 17.4 1.3 1 23 626 648 626 648 0.98

15 20 2.3e-06 0.001 21.7 0.5 1 23 654 676 654 676 0.98

16 20 0.00013 0.054 16.3 2.7 1 23 682 704 682 704 0.97

17 20 5e-08 2.1e-05 27.0 1.7 1 23 803 825 803 825 0.98

18 20 0.0005 0.22 14.4 0.9 3 23 833 853 831 853 0.98

19 20 4e-05 0.017 17.9 0.4 1 23 860 882 860 882 0.98

20 20 0.0016 0.67 12.9 6.8 1 23 888 910 888 911 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.028	12	8.9	0.2	2	23	108	130	107	130	0.96
2	20	0.00084	0.36	13.7	0.8	1	23	136	158	136	158	0.98
3	20	4.8e-05	0.02	17.6	0.5	2	23	167	188	166	188	0.97
4	20	0.0018	0.76	12.7	0.9	1	23	194	217	194	217	0.96
5	20	0.0023	0.98	12.3	1.6	1	22	249	270	249	271	0.91
6	20	2.9e-06	0.0013	21.4	1.7	1	23	277	299	277	299	0.97
7	20	3.4e-06	0.0014	21.2	1.0	1	23	305	328	305	328	0.97
8	20	0.0034	1.5	11.8	2.7	1	23	338	361	338	361	0.95
9	20	6.3e-05	0.027	17.3	1.3	3	23	454	474	454	474	0.97
10	20	7e-07	0.0003	23.4	0.5	1	23	480	502	480	502	0.98
11	20	0.09	38	7.3	0.0	1	23	509	533	509	533	0.90
12	20	0.0047	2	11.4	1.4	1	19	539	557	539	560	0.90
13	20	0.065	28	7.8	2.3	1	23	598	620	598	620	0.97
14	20	5.5e-05	0.023	17.4	1.3	1	23	626	648	626	648	0.98
15	20	2.3e-06	0.001	21.7	0.5	1	23	654	676	654	676	0.98
16	20	0.00013	0.054	16.3	2.7	1	23	682	704	682	704	0.97
17	20	5e-08	2.1e-05	27.0	1.7	1	23	803	825	803	825	0.98
18	20	0.0005	0.22	14.4	0.9	3	23	833	853	831	853	0.98
19	20	4e-05	0.017	17.9	0.4	1	23	860	882	860	882	0.98
20	20	0.0016	0.67	12.9	6.8	1	23	888	910	888	911	0.95

Sequence Information

Coding Sequence: ATGCAGAACGACACAGATCTTCTAACTCCACTTCCAGTGGATATTTCCACCCCAAATTGTCTACTCTACCAACTGAACTATTCGGATGAGAAGTTCCTCAAATCCAATGAGTTCTACGCCTTCGAAATGGATAACTTCACGGTCCCCGAAATGGACGATATACCGACTGGAATCGGCACCTTGGATCCTATTCAGGAAGAAGAGTGTTGCTCCTTGAATGTACCCCCACTTGAACCATTATTTCCACCAGTCGAGCCAGCACCGACCGGTCAGCATATGCTAATAGAACCGGAGGAGGGCCCTGCACCACAGAAACAGCTTTCGTGCGATTTGTGTGCGGAGACTTTCTCGTCGGTGCAAGTGTTACGTCTACATAGACGAGTGCAGCACATTTTGACTAAGGAATTCCGTTGTCGCAAGTGTACCGCGTCGTATAATTTCGAATCAAATCTGGTGCTCCATATGGCTTCGCATGTTCCCCGTTGCAGTAAAAACATCGAATGTCCCGAATGTAAGATGGTTTTCAAGCGAATCTCTACATTCAAGGGTCACCTGAGATCGCATGAGACAAGCGATCGATTCAAGTGCAGCCGATGTGAGAAGGAATTCGATTTGAAGGGGTATTACGAGAAGCACTTGGCCAAGGCACACAAATCTGGCTCCGATGGGACCGTAGAAGAGATTCTGGCGAAAGTCGCGGCAAATGCGAGAAATCGTCCGAAATCGAAGAAACCCCAAGGAAGGTACGTCTGCCAGAAGTGTGGCAAGAGTTTTCTCAAACCATGTCTATTGAGGCGCCACGAAGTAGGTCATTCGAGTACGAAACCCTTCCAATGTACCGAGTGTGACCAGAGATTCACACAGAAGACATCTTTAGCGAGGCACAGGCTGTTGCATGAGGGCGTTAAGGATTTCAGTTGTCCCAAATGCAGTCTTAGCTTTGCCCAGAAAAACAACCTCATCACCCACATAAAACGGACGCACCCGATGGACGCAGATTTGGATAAGATGTTTTCTTGCGATTACTGTGCATGTGTATTCACCAAACTGAATAGTCTCAATCGCCACAAGGCCATGACGCATCCAGAGGCGGGCAATACTTTTGACGACGATACGTTCAACGATGACGATGGTGACAATGTCAATTTTGCCAAAGTGATGGAGCAATTGAAAAGCCTCCAGGAATCCATGGTGATTATGGATATGCAATCGCCGGAATTGGAACTTTCGCTGATGAAACCACCATCGCCTGGACCGAAAGTTCGCACAATCACACTCGTCGATACCCTCAACCCCACGAAAAAGAAGACCTACCAGACAGTCCGAGAAATAATCCACAAAGACCAGAAGACCCTGGGATGCATGTCGTGCGACAGAGAATTCAAAAGGCCCTTCGATTTGTTGAGACACCTTCGAACTCACACAAAAGAAAAGCTCTTCAGCTGTGAGCATTGCGATAAAACCTTCGCCACAAGTGCCGGCCTCAAGGCTCATGTTAATATCCATCTCGAGGGGGAGAAAATCTATGCCTGCGCTGTGCCTGAATGTGGGAAACTCTTTTCGTCCATCAGAAAGTTGGATATCCACTCCAGAGCTCACACCAGCATTGTATCGTACTTCTGCCCCGTTTGCTCAAAAACTTTCTCCTCAAAAGCTGGGTTTTCTGGTCACAAACACCAGACCGAGGACAAAGAAATCGACATAGTTCGACCACTCCTTATGCAACCGGTACGAATCGACTCCAATGAAGTGGAAGAGGCTGAGAAGTCCGAAGAGTACTTGAAAAGAAGTCACCAGTGCTACATTTGCGGATTGAAAATGCAGAAGTTGTCTCATTTAAGGGCCCACGAAGCCACTCACCAAGGTGATAAACCGTTCAAATGCACCATCTGCTTGAGGTCATATGGCACGCAAAGCTCTCTAAATCTGCATTATAAGATCCATACGGCCGAGAAACCGTATGTCTGCGAAATTTGCAATGCAAAATTCATGACGCGTTCCTTGCTCAAGCGCCACATGATTTCACACACTGACGTGCGCAATTTTGCTTGTCCGTATTGCAGCGAACGCTTCAAAACGAGCGATAACTGCAAGAATCACATACTGACACATGCTCGCCGTCTGTTAGCGAGTCCGGAACCAGCTCTCGTGGAGGATGACACACAGCTCCCAGATATAAAAGAATTACCCGAAGAAGATCTATCTGAAGCACTATCCCAAACCTGCATTGCGGTAGTTCAAAGCCCAAACAAAAATCTCTCACCCAAGTTCATTCAATTGGAAATGGTTCAGAGCTGTAAGAAGCATAACCACAAAAACCTTATCGTCGAGAAGGTTGCTAATACGTCGAAGAAGTCGCCAAAGAAACTACTTAAACGTGCCTCGAACCTAAACAACAAAGCCAGTCACCGATGCAGTGTGTGCGGGAAAGTTTTCACCAAGGCAAGTGACCTGACACGCCATGCACGGACtcatacaaaagaaaaaccattcgGTTGCAATTTGTGCGAGAGAAAATTCGCCCTAATGTCCACTTTGATGCAGCACATGAAAACGCATGATACTATGAGAGAGACATATGACTGTCAGGTGTGTGGCAAGAAGTATAAATCGAGGAAGGTTCTGGTTGTACATTTGAGAATTCACACAGGTGAGCGACCGTTTCATTGTGGTGTTTGCAAAAAGTCATTTAGAACGTCGGGTCATAAGATATCGCATATGAAGGCGcaccacaaaaagaaaaagtga
Protein Sequence: MQNDTDLLTPLPVDISTPNCLLYQLNYSDEKFLKSNEFYAFEMDNFTVPEMDDIPTGIGTLDPIQEEECCSLNVPPLEPLFPPVEPAPTGQHMLIEPEEGPAPQKQLSCDLCAETFSSVQVLRLHRRVQHILTKEFRCRKCTASYNFESNLVLHMASHVPRCSKNIECPECKMVFKRISTFKGHLRSHETSDRFKCSRCEKEFDLKGYYEKHLAKAHKSGSDGTVEEILAKVAANARNRPKSKKPQGRYVCQKCGKSFLKPCLLRRHEVGHSSTKPFQCTECDQRFTQKTSLARHRLLHEGVKDFSCPKCSLSFAQKNNLITHIKRTHPMDADLDKMFSCDYCACVFTKLNSLNRHKAMTHPEAGNTFDDDTFNDDDGDNVNFAKVMEQLKSLQESMVIMDMQSPELELSLMKPPSPGPKVRTITLVDTLNPTKKKTYQTVREIIHKDQKTLGCMSCDREFKRPFDLLRHLRTHTKEKLFSCEHCDKTFATSAGLKAHVNIHLEGEKIYACAVPECGKLFSSIRKLDIHSRAHTSIVSYFCPVCSKTFSSKAGFSGHKHQTEDKEIDIVRPLLMQPVRIDSNEVEEAEKSEEYLKRSHQCYICGLKMQKLSHLRAHEATHQGDKPFKCTICLRSYGTQSSLNLHYKIHTAEKPYVCEICNAKFMTRSLLKRHMISHTDVRNFACPYCSERFKTSDNCKNHILTHARRLLASPEPALVEDDTQLPDIKELPEEDLSEALSQTCIAVVQSPNKNLSPKFIQLEMVQSCKKHNHKNLIVEKVANTSKKSPKKLLKRASNLNNKASHRCSVCGKVFTKASDLTRHARTHTKEKPFGCNLCERKFALMSTLMQHMKTHDTMRETYDCQVCGKKYKSRKVLVVHLRIHTGERPFHCGVCKKSFRTSGHKISHMKAHHKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01521331;
90% Identity: iTF_01522824;
80% Identity: -