Vbom061674.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- bab2_1
- Assembly
- GCA_949129095.1
- Location
- OX422142.1:197822383-197826979[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-16 1.3e-13 52.8 0.0 2 43 109 151 108 153 0.95
Sequence Information
- Coding Sequence
- ATGGAATTCATCGACATTAGGGGTGTCTTCAACAACGTCACAGCCGAGGCGATAACAGCAGCACTATCAGATCTGAATGTAGAGGTCACAACAAGCGTATTGATAAATCAGCGTCTCatagaaaaaaatcatcagaCACACCACAAGATGGCTAAACTTATTGAAGGAGTGCATCCATGGATGAATGCAGCTACATCTTCCTCCGTTGCCGATAGCTATCAATATCAACTACAGTCAATGTGGCAGAAATGCTGGAATACTAATCAACAAAGTCTGGTGCAGCAACTGCGCTTTCGAGAGCGTGGCCCACTTAAATCTTGGCGACCCGAATCAATGGCCGAAGCAATATTTAGCGTTTTAAAGGAaggtctatccctttcacaggCCGCCCGCAAATATGACATACCGTATCCAACGTTTGTTCTTTATGCCAATCGAGTTCATAACATGCTGGGGCCTTCACTAGATGGTGGTTCTGATCCTCGTCCTAAAGCCAGAGGCCGTCCACAAAGAATTCTTTTGGGAATGTGGCCAGAAGAGCTAATTCGGTCTGTCATTAAGGCAGTGGTATTTCGAGACTATCGTGAAATAAAAGAGGAAACGGTTCAAATGTATTCGAAtggcggtggcggtggtgtCGCCGCAGTAGCACACTCGTCTCAGTATGGAATGCCGGGTAACTCTTCAAATGGGCCTTCGTcgaatggttatcacaataaaatGGGAATGTCCTCTGGAACAATGCCTGCCGACTCGACAAGCCCCCTATCAACAATGGCAGAAACTCTTCGACGTCAAATCCAAATGTCACAACAATCGCCATCACCGTCGTTAAATATGTACAAGTCGCCAGCTTTCTTGCAACGATCCGAAATGGAGGATCCCATGTCGAAACGAAGCCCAGCAGATCTTCATCTATCTTCGGGGAAAATGCCCGACAATTTACCCGATCTAAGCGCACTTGGCCTAATGGGAATACCTGGTTTGAATGTCATTCCTCAGGGACGTAATCAGCATTCAATAAATCAACAGTCCCAACATATCCAGCCGAATTCTTCCTTCTCGAATGCTATGTCTCAAGTCGCCGCTGCTGCCGCTTCAAGACCTCAAATTCCATATGGCCAACAAAGAAGTAGCAACCAGAGTGGTAGCAGTATTTCCCATCAAAAGTCTACCAGCAGTTCTCCGTTTCCTagtaattacaaaacaaaatccgaTCCCTGTTCATATAAATTTCCAGACAAGCGAATGCTAGAAGGTCTAACTCCCGGCATTGATTTTGAAGCTATCGCAAATGGACTCTTACAAAAATCGCACAAAGTATCACCCCGTTTTGAAGATTTCTTCCCCAGCCCAGATGTAAATGATTTATTCAATGCGAATCCGCCCTCGGAACCAACACCAGGTGGTTTCCCCATGAAAGATCATCCCATAGCTAAGATAAAGTTGGAGCATCAGCATCACAGCACAGATACCCATGAGGAATAA
- Protein Sequence
- MEFIDIRGVFNNVTAEAITAALSDLNVEVTTSVLINQRLIEKNHQTHHKMAKLIEGVHPWMNAATSSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYSNGGGGGVAAVAHSSQYGMPGNSSNGPSSNGYHNKMGMSSGTMPADSTSPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRSPADLHLSSGKMPDNLPDLSALGLMGIPGLNVIPQGRNQHSINQQSQHIQPNSSFSNAMSQVAAAAASRPQIPYGQQRSSNQSGSSISHQKSTSSSPFPSNYKTKSDPCSYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKVSPRFEDFFPSPDVNDLFNANPPSEPTPGGFPMKDHPIAKIKLEHQHHSTDTHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314190;
- 90% Identity
- iTF_01522471;
- 80% Identity
- -