Vbom059353.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- br
- Assembly
- GCA_949129095.1
- Location
- OX422142.1:157153680-157159496[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1e-14 6.9e-11 44.0 0.0 3 43 291 331 289 333 0.91 2 3 0.082 62 5.8 0.0 27 37 362 372 353 377 0.87 3 3 4.2e-16 3.2e-13 51.5 0.0 3 41 400 438 398 441 0.93
Sequence Information
- Coding Sequence
- ATGAACCACCTCAAGTGGATGGGCCATACGGCAACCATCCTAGACATCCAGAAGACACTTAAAACTGATCCAGACACTTGTGACATAACGCTCGCATGCCGAGGTAAATCGGTGAAAGCCCATCGTTTTGTGCTGTCCTCGTGTAGTGATTTGCTTCGTGACATCTTAAATGATGTGCCATTTGGTCAGGAAGCTACTGTGGTGGTGCCTGATGTGAAGGGTAGCCTATTGGATAGTGTTATGAGTTTTATTTACATGGGCGAGACAAGTTTATCATCGACGAATTTATCTGATTTTCTGGAGGCTATCAGTATACTCGGTATCAAGAGCGCCATTAGTTTTGAATGTGCTCCCAGTGGTGGTGGTTCAGGAAATAATAGTAAAAATGTTGCCGAGATGACTGAAATGGAAGAGGAATTAATGGAAGGCGAACCGGAGCAGGAAATTGTCGAAAAGGATGAGGACGAGgACCAAACTGTAGCAGAAAGCCATAGCGTACGAGAATTGGAGTTCCTTGAGGTGTACAATGAGCAAGAAAAAATCAGTTACACCATTGAGAACATTACACCAAACAATGCCAACGAATATATTCTTACAGAAAGTTCTGGCACCTTCACACTGACGCCGAATGCAAAAATCGATGGCACCGAAGTGGCAACACTTGTTGACAAACCCGATGAAGACCAAGAACAAGCCTTAATGGAGCATTTTAGTGATCCAATTGGTGATAGTAGTCACTGTTCTAGTACAGATATCAAAGAGGAAAAgtctaataaaaaactaaaagacgAATTTAGTGAATTTCAAGCACTCAGTCCAGAAGATTCGAAAGGATATCAAAATTTCAATGAGACACAATCGGCTCGAGTTGAAGCTCTAGAAAATGCTGTCCTTGCCGTCGTTGATGAAGGAATGAGTTTACAAAAAGCCGCcattaaatacaatatttccaaAACAGTACTTTGGCGTAGAGTAAAGAAGCATCCACTCTACATGAAAACAACACGTGAAAATCCTCTAATTACAGCGGCATGTGAACGTTTAAAAAATGGCGATTCATTGAAAAGCATTAGTCAAGCGCTAGATATTCCAATGTCTACATTGCATCGACATAAAGTAAGACTGGCACAAGAAGGACGATTACCGGAATATGTTACCTTCAAGAAACGTGGTCCAATGTCAAAGGAAATGCTTAAGGAGAAATTAACAAAAGCCGTACAAGCATGTCTTGGTAGTGGAATGTCACAAAATCATGCAGCAAATGTATTTGATGTACCGAAGAGTACATTATGGCGACATTTACAAAAGAAAGTATATCGCTCCGATAGTTCAAACGATGTTAGTATTAAGGAAGAAATAGTTTTGCCCTAG
- Protein Sequence
- MNHLKWMGHTATILDIQKTLKTDPDTCDITLACRGKSVKAHRFVLSSCSDLLRDILNDVPFGQEATVVVPDVKGSLLDSVMSFIYMGETSLSSTNLSDFLEAISILGIKSAISFECAPSGGGSGNNSKNVAEMTEMEEELMEGEPEQEIVEKDEDEDQTVAESHSVRELEFLEVYNEQEKISYTIENITPNNANEYILTESSGTFTLTPNAKIDGTEVATLVDKPDEDQEQALMEHFSDPIGDSSHCSSTDIKEEKSNKKLKDEFSEFQALSPEDSKGYQNFNETQSARVEALENAVLAVVDEGMSLQKAAIKYNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEYVTFKKRGPMSKEMLKEKLTKAVQACLGSGMSQNHAANVFDVPKSTLWRHLQKKVYRSDSSNDVSIKEEIVLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_01521797;
- 80% Identity
- iTF_01521233;